Definition Shewanella amazonensis SB2B chromosome, complete genome.
Accession NC_008700
Length 4,306,142

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The map label for this gene is katG1

Identifier: 119776402

GI number: 119776402

Start: 3884878

End: 3887034

Strand: Direct

Name: katG1

Synonym: Sama_3270

Alternate gene names: 119776402

Gene position: 3884878-3887034 (Clockwise)

Preceding gene: 119776401

Following gene: 119776403

Centisome position: 90.22

GC content: 57.95

Gene sequence:

>2157_bases
ATGAGTAATGAAGGCAAATGTCCGGTAATGCACGGCGGTGCAACCTCTGCCACCCAGGCCGACAATCATTGGTGGCCCAA
AGCCCTGAACCTCGACATACTCCACCAGCACGACAGTAAAACCAACCCCATGGCACCGGGCTTTAATTACCGGGAAGCCC
TGAAAGGCCTCGATGTGGAGGCACTCAAACAAGATCTCAAAGCCCTGATGACCGACAGCCAGGCCTGGTGGCCAGCGGAC
TGGGGCCATTATGGCGGCCTGATGATCCGCATGGCGTGGCACTCGGCCGGCACCTATCGCATTGCCGACGGTCGTGGTGG
TGGCGGCCATGGTGCACAGCGCTTTGCCCCACTCAATTCCTGGCCCGACAATGGCAATCTCGACAAGGCCAGGCGCCTGC
TGTGGCCCATCAAACAGAAATACGGCAACAAAGTGAGCTGGGCCGACTTGATGATTTTGGCAGGCAACATGGCGTATGAA
TCCATGGGGCTGAAAACCTTCGGCTTTGCCTTTGGTCGTGAAGACATCTGGCACCCCGAGAAAGACACCTACTGGGGCGC
AGAAAAAGAATGGTTGGCCCCCAGCGGCGGCGCCAACAGTCGCTATTCCGGGGTTCGCGATCTGCAAAACCCACTGGCAG
CAGTGATGATGGGGCTGATTTATGTCAACCCGGAAGGGGTCGATGGCAATCCAGACCCACTGAAAACCGCCCAGGATATG
CGCGTGACCTTCGCCCGAATGGCGATGAATGACGAAGAAACTGTGGCACTCACCGCCGGTGGCCATACCGTGGGTAAAGC
CCATGGTAATGGTAACGCCGCCAATCTGGGGCCTGAACCTGAAGCCGCGCCTTTGGAAGAGCAAGGCTTTGGCTGGATGA
ATCATCAAAGTCGCGGCATAGGCCGCAACACAGTCACCAGCGGAATCGAAGGCGCCTGGACCACCCACCCCACCCGTTGG
GACAACGGTTATTTCCATCTGCTGTTCAGCTACGACTGGGCACTCACCAAGAGTCCGGCAGGCGCGTGGCAGTGGGAGCC
GGTGAACATCAGGGAAGAAGACAAGCCAGTGGATGTGGAAGACCCCAACATCCGCAGCAACCCCATGATGACAGACGCCG
ACATGGCGCTGAAGATGGACCCGGATTACCGCCGCATCGCCGAAAGATTCTTCCACGATCCCGACTATTTTGCCGACACC
TTTGCCAGGGCCTGGTTCAAGTTGACTCACAGAGACATGGGCCCCAAATCCCGCTACTTTGGTCCGGATGTGCCAGCAGA
AGACTTGATTTGGCAGGACCCGGTACCCAAGGGTAACAGTCAATATGACCCCGAGGCGGTTAAGGCACGCATCGCCGGTA
CGGGGCTTGGCGCCGCCGAGCTGGTCGCCACCGCATGGGACAGCGCCAGAACCTATAGAAACTCAGATAAGCGCGGCGGA
GCCAACGGCGCACGCATCCGCTTGTTGCCGCAAAAAGACTGGGTAGCCAACGAGCCCGCCAGACTGGCCAGAGTGCTGGA
GCTGCTTACCCCCATCGCCAGCGACATGGGCGTCAGCATTGCCGACACCCTGGTGCTGGGTGGCAATCTTGGTGTCGAGC
TGGCGGCCAAAGCCGCCGGTTTCAATATCAAGGTGCCTTTTATCCCCGGTCGTGGTGATGCCAGTCAGGCACAAACCGAC
ATCGACTCCTTTGAGGTGCTTGAGCCACTGGCCGATGGCTTCCGTAACTGGCAAAAGCAGGACTTTGTGGTCACGCCGGA
AGAAATGCTGCTCGACCGGGCACAACTCATGGGACTCTCAGCGCCGGAAATGACAGTGCTGATTGGTGGCATGCGCGCCA
TGGCGGTTAACCATGGTGGAACCACACATGGGGTGCTGACCGACAATCCCGGCAGCCTCAGTAATGACTTTTTCGTTAAC
CTCACCGATATGAGTTATCGCTGGAAACCGGTCGCCAACAATCTCTATGAGATCTGCGATAGGGCAAGTGGCCAGAAAAA
ATGGACCGCCACCCGGGTCGATTTGGTGTTTGGCTCCAACTCTGTATTGCGCGCCTACGCCGAGTACTATGCCCAGGACG
ACAACAAAGAGACCTTCGTAAAGGACTTTGTCACCGCCTGGTGCAAGGTGATGAATGCCGACCGCTTCGATGCCTAG

Upstream 100 bases:

>100_bases
GGCCAATCGCAGCTGAAGACTCAGATGCCAAGCTTCTGTCGATGCCATGTTTTCTGATGGAAGCCCTTAAACAGGGAATG
GTACTAAGGAGAGCAGCAAC

Downstream 100 bases:

>100_bases
GCCAACGATGCCATTCTGAACTGACAACGCCTCCGTAAGGAGGCGTTTCATCATCTACAGAGGCACTTGGGCTTGGGCAT
TGGCTGGGGTACAATCGAGC

Product: catalase

Products: NA

Alternate protein names: CP 1; Peroxidase/catalase 1

Number of amino acids: Translated: 718; Mature: 717

Protein sequence:

>718_residues
MSNEGKCPVMHGGATSATQADNHWWPKALNLDILHQHDSKTNPMAPGFNYREALKGLDVEALKQDLKALMTDSQAWWPAD
WGHYGGLMIRMAWHSAGTYRIADGRGGGGHGAQRFAPLNSWPDNGNLDKARRLLWPIKQKYGNKVSWADLMILAGNMAYE
SMGLKTFGFAFGREDIWHPEKDTYWGAEKEWLAPSGGANSRYSGVRDLQNPLAAVMMGLIYVNPEGVDGNPDPLKTAQDM
RVTFARMAMNDEETVALTAGGHTVGKAHGNGNAANLGPEPEAAPLEEQGFGWMNHQSRGIGRNTVTSGIEGAWTTHPTRW
DNGYFHLLFSYDWALTKSPAGAWQWEPVNIREEDKPVDVEDPNIRSNPMMTDADMALKMDPDYRRIAERFFHDPDYFADT
FARAWFKLTHRDMGPKSRYFGPDVPAEDLIWQDPVPKGNSQYDPEAVKARIAGTGLGAAELVATAWDSARTYRNSDKRGG
ANGARIRLLPQKDWVANEPARLARVLELLTPIASDMGVSIADTLVLGGNLGVELAAKAAGFNIKVPFIPGRGDASQAQTD
IDSFEVLEPLADGFRNWQKQDFVVTPEEMLLDRAQLMGLSAPEMTVLIGGMRAMAVNHGGTTHGVLTDNPGSLSNDFFVN
LTDMSYRWKPVANNLYEICDRASGQKKWTATRVDLVFGSNSVLRAYAEYYAQDDNKETFVKDFVTAWCKVMNADRFDA

Sequences:

>Translated_718_residues
MSNEGKCPVMHGGATSATQADNHWWPKALNLDILHQHDSKTNPMAPGFNYREALKGLDVEALKQDLKALMTDSQAWWPAD
WGHYGGLMIRMAWHSAGTYRIADGRGGGGHGAQRFAPLNSWPDNGNLDKARRLLWPIKQKYGNKVSWADLMILAGNMAYE
SMGLKTFGFAFGREDIWHPEKDTYWGAEKEWLAPSGGANSRYSGVRDLQNPLAAVMMGLIYVNPEGVDGNPDPLKTAQDM
RVTFARMAMNDEETVALTAGGHTVGKAHGNGNAANLGPEPEAAPLEEQGFGWMNHQSRGIGRNTVTSGIEGAWTTHPTRW
DNGYFHLLFSYDWALTKSPAGAWQWEPVNIREEDKPVDVEDPNIRSNPMMTDADMALKMDPDYRRIAERFFHDPDYFADT
FARAWFKLTHRDMGPKSRYFGPDVPAEDLIWQDPVPKGNSQYDPEAVKARIAGTGLGAAELVATAWDSARTYRNSDKRGG
ANGARIRLLPQKDWVANEPARLARVLELLTPIASDMGVSIADTLVLGGNLGVELAAKAAGFNIKVPFIPGRGDASQAQTD
IDSFEVLEPLADGFRNWQKQDFVVTPEEMLLDRAQLMGLSAPEMTVLIGGMRAMAVNHGGTTHGVLTDNPGSLSNDFFVN
LTDMSYRWKPVANNLYEICDRASGQKKWTATRVDLVFGSNSVLRAYAEYYAQDDNKETFVKDFVTAWCKVMNADRFDA
>Mature_717_residues
SNEGKCPVMHGGATSATQADNHWWPKALNLDILHQHDSKTNPMAPGFNYREALKGLDVEALKQDLKALMTDSQAWWPADW
GHYGGLMIRMAWHSAGTYRIADGRGGGGHGAQRFAPLNSWPDNGNLDKARRLLWPIKQKYGNKVSWADLMILAGNMAYES
MGLKTFGFAFGREDIWHPEKDTYWGAEKEWLAPSGGANSRYSGVRDLQNPLAAVMMGLIYVNPEGVDGNPDPLKTAQDMR
VTFARMAMNDEETVALTAGGHTVGKAHGNGNAANLGPEPEAAPLEEQGFGWMNHQSRGIGRNTVTSGIEGAWTTHPTRWD
NGYFHLLFSYDWALTKSPAGAWQWEPVNIREEDKPVDVEDPNIRSNPMMTDADMALKMDPDYRRIAERFFHDPDYFADTF
ARAWFKLTHRDMGPKSRYFGPDVPAEDLIWQDPVPKGNSQYDPEAVKARIAGTGLGAAELVATAWDSARTYRNSDKRGGA
NGARIRLLPQKDWVANEPARLARVLELLTPIASDMGVSIADTLVLGGNLGVELAAKAAGFNIKVPFIPGRGDASQAQTDI
DSFEVLEPLADGFRNWQKQDFVVTPEEMLLDRAQLMGLSAPEMTVLIGGMRAMAVNHGGTTHGVLTDNPGSLSNDFFVNL
TDMSYRWKPVANNLYEICDRASGQKKWTATRVDLVFGSNSVLRAYAEYYAQDDNKETFVKDFVTAWCKVMNADRFDA

Specific function: Bifunctional enzyme with both catalase and broad- spectrum peroxidase activity

COG id: COG0376

COG function: function code P; Catalase (peroxidase I)

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the peroxidase family. Peroxidase/catalase subfamily

Homologues:

Organism=Escherichia coli, GI1790378, Length=725, Percent_Identity=56.1379310344828, Blast_Score=787, Evalue=0.0,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): KATG1_SHEAM (A1SAR6)

Other databases:

- EMBL:   CP000507
- RefSeq:   YP_929142.1
- ProteinModelPortal:   A1SAR6
- SMR:   A1SAR6
- STRING:   A1SAR6
- PeroxiBase:   3656
- GeneID:   4605517
- GenomeReviews:   CP000507_GR
- KEGG:   saz:Sama_3270
- NMPDR:   fig|326297.7.peg.3081
- eggNOG:   COG0376
- HOGENOM:   HBG285610
- OMA:   WPNALNL
- PhylomeDB:   A1SAR6
- ProtClustDB:   PRK15061
- HAMAP:   MF_01961
- InterPro:   IPR000763
- InterPro:   IPR010255
- InterPro:   IPR002016
- InterPro:   IPR019794
- PRINTS:   PR00460
- PRINTS:   PR00458
- TIGRFAMs:   TIGR00198

Pfam domain/function: PF00141 peroxidase; SSF48113 Peroxidase_super

EC number: =1.11.1.6; =1.11.1.7

Molecular weight: Translated: 79500; Mature: 79369

Theoretical pI: Translated: 5.52; Mature: 5.52

Prosite motif: PS00435 PEROXIDASE_1; PS00436 PEROXIDASE_2; PS50873 PEROXIDASE_4

Important sites: ACT_SITE 94-94

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
3.9 %Met     (Translated Protein)
4.3 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
3.8 %Met     (Mature Protein)
4.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSNEGKCPVMHGGATSATQADNHWWPKALNLDILHQHDSKTNPMAPGFNYREALKGLDVE
CCCCCCCEEEECCCCCCCCCCCCCCCCCCCEEEEECCCCCCCCCCCCCCHHHHHCCCCHH
ALKQDLKALMTDSQAWWPADWGHYGGLMIRMAWHSAGTYRIADGRGGGGHGAQRFAPLNS
HHHHHHHHHHCCCCCCCCCCCCCCCCEEEEEEECCCCEEEEECCCCCCCCCHHHCCCCCC
WPDNGNLDKARRLLWPIKQKYGNKVSWADLMILAGNMAYESMGLKTFGFAFGREDIWHPE
CCCCCCHHHHHHHHHHHHHHHCCCCCHHEEEEEECCHHHHHCCCHHHHHHHCCCCCCCCC
KDTYWGAEKEWLAPSGGANSRYSGVRDLQNPLAAVMMGLIYVNPEGVDGNPDPLKTAQDM
CCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHEEEECCCCCCCCCCCCCCHHHH
RVTFARMAMNDEETVALTAGGHTVGKAHGNGNAANLGPEPEAAPLEEQGFGWMNHQSRGI
HHHHHHHHCCCCCEEEEEECCCEEEECCCCCCCCCCCCCCCCCCCHHCCCCCCCCCCCCC
GRNTVTSGIEGAWTTHPTRWDNGYFHLLFSYDWALTKSPAGAWQWEPVNIREEDKPVDVE
CCHHHHCCCCCCCCCCCCCCCCCEEEEEEEECEEEECCCCCCEECCCCCCCCCCCCCCCC
DPNIRSNPMMTDADMALKMDPDYRRIAERFFHDPDYFADTFARAWFKLTHRDMGPKSRYF
CCCCCCCCCEECCCCEEEECCCHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCCCCCCC
GPDVPAEDLIWQDPVPKGNSQYDPEAVKARIAGTGLGAAELVATAWDSARTYRNSDKRGG
CCCCCHHHCEECCCCCCCCCCCCHHHHHEECCCCCCCHHHHHHHHHHHHHHHCCCCCCCC
ANGARIRLLPQKDWVANEPARLARVLELLTPIASDMGVSIADTLVLGGNLGVELAAKAAG
CCCCEEEEEECCCCCCCCHHHHHHHHHHHHHHHHHCCCCHHHHEEECCCCCEEEEHCCCC
FNIKVPFIPGRGDASQAQTDIDSFEVLEPLADGFRNWQKQDFVVTPEEMLLDRAQLMGLS
CEEEEEEECCCCCHHHHHHCCHHHHHHHHHHHHHHCCCCCCEEECHHHHHHHHHHHHCCC
APEMTVLIGGMRAMAVNHGGTTHGVLTDNPGSLSNDFFVNLTDMSYRWKPVANNLYEICD
CCCEEEEECCEEEEEEECCCCCCCEEECCCCCCCCCEEEEEECCCEECCHHHHHHHHHHH
RASGQKKWTATRVDLVFGSNSVLRAYAEYYAQDDNKETFVKDFVTAWCKVMNADRFDA
CCCCCCCEEEEEEEEEECCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCCCCC
>Mature Secondary Structure 
SNEGKCPVMHGGATSATQADNHWWPKALNLDILHQHDSKTNPMAPGFNYREALKGLDVE
CCCCCCEEEECCCCCCCCCCCCCCCCCCCEEEEECCCCCCCCCCCCCCHHHHHCCCCHH
ALKQDLKALMTDSQAWWPADWGHYGGLMIRMAWHSAGTYRIADGRGGGGHGAQRFAPLNS
HHHHHHHHHHCCCCCCCCCCCCCCCCEEEEEEECCCCEEEEECCCCCCCCCHHHCCCCCC
WPDNGNLDKARRLLWPIKQKYGNKVSWADLMILAGNMAYESMGLKTFGFAFGREDIWHPE
CCCCCCHHHHHHHHHHHHHHHCCCCCHHEEEEEECCHHHHHCCCHHHHHHHCCCCCCCCC
KDTYWGAEKEWLAPSGGANSRYSGVRDLQNPLAAVMMGLIYVNPEGVDGNPDPLKTAQDM
CCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHEEEECCCCCCCCCCCCCCHHHH
RVTFARMAMNDEETVALTAGGHTVGKAHGNGNAANLGPEPEAAPLEEQGFGWMNHQSRGI
HHHHHHHHCCCCCEEEEEECCCEEEECCCCCCCCCCCCCCCCCCCHHCCCCCCCCCCCCC
GRNTVTSGIEGAWTTHPTRWDNGYFHLLFSYDWALTKSPAGAWQWEPVNIREEDKPVDVE
CCHHHHCCCCCCCCCCCCCCCCCEEEEEEEECEEEECCCCCCEECCCCCCCCCCCCCCCC
DPNIRSNPMMTDADMALKMDPDYRRIAERFFHDPDYFADTFARAWFKLTHRDMGPKSRYF
CCCCCCCCCEECCCCEEEECCCHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCCCCCCC
GPDVPAEDLIWQDPVPKGNSQYDPEAVKARIAGTGLGAAELVATAWDSARTYRNSDKRGG
CCCCCHHHCEECCCCCCCCCCCCHHHHHEECCCCCCCHHHHHHHHHHHHHHHCCCCCCCC
ANGARIRLLPQKDWVANEPARLARVLELLTPIASDMGVSIADTLVLGGNLGVELAAKAAG
CCCCEEEEEECCCCCCCCHHHHHHHHHHHHHHHHHCCCCHHHHEEECCCCCEEEEHCCCC
FNIKVPFIPGRGDASQAQTDIDSFEVLEPLADGFRNWQKQDFVVTPEEMLLDRAQLMGLS
CEEEEEEECCCCCHHHHHHCCHHHHHHHHHHHHHHCCCCCCEEECHHHHHHHHHHHHCCC
APEMTVLIGGMRAMAVNHGGTTHGVLTDNPGSLSNDFFVNLTDMSYRWKPVANNLYEICD
CCCEEEEECCEEEEEEECCCCCCCEEECCCCCCCCCEEEEEECCCEECCHHHHHHHHHHH
RASGQKKWTATRVDLVFGSNSVLRAYAEYYAQDDNKETFVKDFVTAWCKVMNADRFDA
CCCCCCCEEEEEEEEEECCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA