Click here to switch to the map view.

The map label for this gene is yegM [C]

Identifier: 119776400

GI number: 119776400

Start: 3880395

End: 3881513

Strand: Direct

Name: yegM [C]

Synonym: Sama_3268

Alternate gene names: 119776400

Gene position: 3880395-3881513 (Clockwise)

Preceding gene: 119776399

Following gene: 119776401

Centisome position: 90.11

GC content: 53.26

Gene sequence:

>1119_bases
ATGAAAAAGTGGATTCTGGTCATGCTGACCATAGCGCTGGTGACTCTGGGGAGTGTCATCGGCTTTAATCTGTTTGTAAA
AGGCAAAATTGCCGAGGCCATCGCCAATATGCCGGAAGCCGAGTTTCCGGTCACGGCGCTGGCAGTGAGCCCCACAAAGT
GGCAGCCCACCATCGATGCCATCGGCTTTGTCGAGCCACATCAGGGGGTCACCATCGCCAACGAAGCAGCGGGCGTGGTG
ACCAATATCGCCTTCGAAAACGGCAGCAATATCAGCAAAGACCAATTGCTGGTTGCCCTGGATACCCGGGTTGAAAAAGC
AAATCTACAGGCCAAGCTGGTGCAGCTGCCAGCCTCCGAAGCCGACTTCAAACGCTTAACGCGTCTGTACGCACAAAAAT
CCGTATCAAAACAGGATTTGGACAACGCCGAGGCCAAGTATCTGGCGCTGAAGGCCGATATCGAAAGCCTGGAAGCCACC
ATAGGTCGTCGCGAAATCCGCGCACCCTTCTCTGGTCTGGTGGGTATCCGCAACATCAACCTCGGTGAATATCTCCAGGT
GGGCAGTGACATAGTGCGTCTTGAAGACATCAGCACCATGAAAATCCGTTTCACCATTCCACAAACCCAGCTACCCAGAG
TGGCAGTGGGACAAAAAATTCATGTGTATGTGGATGCCTATCCTGAAGAAGCCTTTGAAGGGGAAATCGCCGCCATCGAG
CCTGCAGTCTTTTATCAAAGCGGACTGATTCAGATCCAGGCCAGGATCCCCAACGATCATGCTCGCCTCAGAAGCGGTAT
GTTCGCCCGGGTCAGCGTTCTCCTCGATAAGCTCGAGCAACAAATCGTGCTGCCACAAACAGCCATTAACTTCACGCTCT
ATGGCAACTCGGTTTATCTCGTTGAGAAGCATGATGAAAACGGACAGGCTGTTTTAAGAGTTCGCCAAATCAATGTGAAT
GTACTCGAGCGCAGTGGCAACGATGCCTTAGTCACAGGCCCATTGAAGCCGGGCGATCTGGTAGTCACATCCGGGCAGAT
CCGCCTGTCCAACAACAGCAAGGTCAGCGTGGTGGAAGACAAGGCCATGACCGACGCCGCCAACATGCCCAAGCTCTAA

Upstream 100 bases:

>100_bases
CGCCGCACCGGTCTGAACTTTCAACAAAGCGAGCTGGAGCAGGTATGTGACCTGTGCTGGCGCGCCATCAAGCCTCACCA
ATAAGCGGAGCCAATAGGCA

Downstream 100 bases:

>100_bases
GGAGACATCCGGATGCGCTTTACTGACATCTTTATCAAACGGCCGGTGCTTGCCGTTTCGATAAGCTTCCTTATCCTGCT
GCTGGGGTTGAATGCCCTCA

Product: HlyD family secretion protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 372; Mature: 372

Protein sequence:

>372_residues
MKKWILVMLTIALVTLGSVIGFNLFVKGKIAEAIANMPEAEFPVTALAVSPTKWQPTIDAIGFVEPHQGVTIANEAAGVV
TNIAFENGSNISKDQLLVALDTRVEKANLQAKLVQLPASEADFKRLTRLYAQKSVSKQDLDNAEAKYLALKADIESLEAT
IGRREIRAPFSGLVGIRNINLGEYLQVGSDIVRLEDISTMKIRFTIPQTQLPRVAVGQKIHVYVDAYPEEAFEGEIAAIE
PAVFYQSGLIQIQARIPNDHARLRSGMFARVSVLLDKLEQQIVLPQTAINFTLYGNSVYLVEKHDENGQAVLRVRQINVN
VLERSGNDALVTGPLKPGDLVVTSGQIRLSNNSKVSVVEDKAMTDAANMPKL

Sequences:

>Translated_372_residues
MKKWILVMLTIALVTLGSVIGFNLFVKGKIAEAIANMPEAEFPVTALAVSPTKWQPTIDAIGFVEPHQGVTIANEAAGVV
TNIAFENGSNISKDQLLVALDTRVEKANLQAKLVQLPASEADFKRLTRLYAQKSVSKQDLDNAEAKYLALKADIESLEAT
IGRREIRAPFSGLVGIRNINLGEYLQVGSDIVRLEDISTMKIRFTIPQTQLPRVAVGQKIHVYVDAYPEEAFEGEIAAIE
PAVFYQSGLIQIQARIPNDHARLRSGMFARVSVLLDKLEQQIVLPQTAINFTLYGNSVYLVEKHDENGQAVLRVRQINVN
VLERSGNDALVTGPLKPGDLVVTSGQIRLSNNSKVSVVEDKAMTDAANMPKL
>Mature_372_residues
MKKWILVMLTIALVTLGSVIGFNLFVKGKIAEAIANMPEAEFPVTALAVSPTKWQPTIDAIGFVEPHQGVTIANEAAGVV
TNIAFENGSNISKDQLLVALDTRVEKANLQAKLVQLPASEADFKRLTRLYAQKSVSKQDLDNAEAKYLALKADIESLEAT
IGRREIRAPFSGLVGIRNINLGEYLQVGSDIVRLEDISTMKIRFTIPQTQLPRVAVGQKIHVYVDAYPEEAFEGEIAAIE
PAVFYQSGLIQIQARIPNDHARLRSGMFARVSVLLDKLEQQIVLPQTAINFTLYGNSVYLVEKHDENGQAVLRVRQINVN
VLERSGNDALVTGPLKPGDLVVTSGQIRLSNNSKVSVVEDKAMTDAANMPKL

Specific function: Unknown

COG id: COG0845

COG function: function code M; Membrane-fusion protein

Gene ontology:

Cell location: Membrane; Single-pass membrane protein (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family [H]

Homologues:

Organism=Escherichia coli, GI87082036, Length=330, Percent_Identity=23.6363636363636, Blast_Score=81, Evalue=1e-16,
Organism=Escherichia coli, GI87081796, Length=336, Percent_Identity=26.4880952380952, Blast_Score=77, Evalue=3e-15,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006143 [H]

Pfam domain/function: PF00529 HlyD [H]

EC number: NA

Molecular weight: Translated: 40725; Mature: 40725

Theoretical pI: Translated: 6.55; Mature: 6.55

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
1.9 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
1.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKKWILVMLTIALVTLGSVIGFNLFVKGKIAEAIANMPEAEFPVTALAVSPTKWQPTIDA
CCHHHHHHHHHHHHHHHHHHHEEEEEECHHHHHHHCCCCCCCCEEEEEECCCCCCCCHHH
IGFVEPHQGVTIANEAAGVVTNIAFENGSNISKDQLLVALDTRVEKANLQAKLVQLPASE
EEEECCCCCEEEECCCCCEEEEEEECCCCCCCCCCEEEEEECCCCCCCCEEEEEECCCCH
ADFKRLTRLYAQKSVSKQDLDNAEAKYLALKADIESLEATIGRREIRAPFSGLVGIRNIN
HHHHHHHHHHHHHCCCHHCCCCCCEEEEEEEHHHHHHHHHHCHHHHCCCHHHCCEEEECC
LGEYLQVGSDIVRLEDISTMKIRFTIPQTQLPRVAVGQKIHVYVDAYPEEAFEGEIAAIE
HHHHHHHCCCEEEEECCCEEEEEEECCCCCCCHHHCCCEEEEEEECCCCHHHCCCEEEEC
PAVFYQSGLIQIQARIPNDHARLRSGMFARVSVLLDKLEQQIVLPQTAINFTLYGNSVYL
HHHEECCCEEEEEEECCCHHHHHHHCHHHHHHHHHHHHHHHEECCCEEEEEEEECCEEEE
VEKHDENGQAVLRVRQINVNVLERSGNDALVTGPLKPGDLVVTSGQIRLSNNSKVSVVED
EEEECCCCEEEEEEEEEEEEEEEECCCCEEEECCCCCCCEEEECCEEEECCCCEEEEEEC
KAMTDAANMPKL
CHHHCCCCCCCC
>Mature Secondary Structure
MKKWILVMLTIALVTLGSVIGFNLFVKGKIAEAIANMPEAEFPVTALAVSPTKWQPTIDA
CCHHHHHHHHHHHHHHHHHHHEEEEEECHHHHHHHCCCCCCCCEEEEEECCCCCCCCHHH
IGFVEPHQGVTIANEAAGVVTNIAFENGSNISKDQLLVALDTRVEKANLQAKLVQLPASE
EEEECCCCCEEEECCCCCEEEEEEECCCCCCCCCCEEEEEECCCCCCCCEEEEEECCCCH
ADFKRLTRLYAQKSVSKQDLDNAEAKYLALKADIESLEATIGRREIRAPFSGLVGIRNIN
HHHHHHHHHHHHHCCCHHCCCCCCEEEEEEEHHHHHHHHHHCHHHHCCCHHHCCEEEECC
LGEYLQVGSDIVRLEDISTMKIRFTIPQTQLPRVAVGQKIHVYVDAYPEEAFEGEIAAIE
HHHHHHHCCCEEEEECCCEEEEEEECCCCCCCHHHCCCEEEEEEECCCCHHHCCCEEEEC
PAVFYQSGLIQIQARIPNDHARLRSGMFARVSVLLDKLEQQIVLPQTAINFTLYGNSVYL
HHHEECCCEEEEEEECCCHHHHHHHCHHHHHHHHHHHHHHHEECCCEEEEEEEECCEEEE
VEKHDENGQAVLRVRQINVNVLERSGNDALVTGPLKPGDLVVTSGQIRLSNNSKVSVVED
EEEECCCCEEEEEEEEEEEEEEEECCCCEEEECCCCCCCEEEECCEEEECCCCEEEEEEC
KAMTDAANMPKL
CHHHCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 7542800 [H]