Definition Shewanella amazonensis SB2B chromosome, complete genome.
Accession NC_008700
Length 4,306,142

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The map label for this gene is 119776362

Identifier: 119776362

GI number: 119776362

Start: 3823901

End: 3824401

Strand: Direct

Name: 119776362

Synonym: Sama_3230

Alternate gene names: NA

Gene position: 3823901-3824401 (Clockwise)

Preceding gene: 119776361

Following gene: 119776365

Centisome position: 88.8

GC content: 53.29

Gene sequence:

>501_bases
ATGAACGGACTCTTGAAACTTCTCTTGATAGGGGCGCTGGCCTACGGCGGCTACGACCTGTATCAAAAGCACTATGAGGT
ACAGGCCGAGCCTGAAGTGGTATGGCAATCCTATGTGCTGGACACAGTTAACATCAGCGTGATGTTTCCCAAGGCCCCCA
CAGTAGAGCGCAAATCGGTGGAAGGGCACATAGTGGAATGGCAAGGCTCAAGGCACGCGGCCGGCGAGTACACCCTGGTT
GTGATACAAAACCCGGATGTAACTCTGGGGGACTATTACCCGAACTCCCTCGTTAACAAGGGCGCCAGACTCAAAGACAA
GCGCTTCATCATGGTCGATGGTTACGACGGCTACGAATTCACCCTGGACTATAACGACAAGCTGGTCACCCAGCGGATGA
TAAGCTTCCACAACGCCATGGTGACCCAGACCGCCATTTACACCGACCACGAAGTCAATAACGGCGACACCGAGAAGTTT
TTGTCCTCGCTGTCACTGTAA

Upstream 100 bases:

>100_bases
TGTTAATATGCAAGACATACCAGTAATCGATAGACTCACTTGATAGCGACAGCAACCCGCAAACCCTTTATCCAGATTTT
CGCTTTTACAAGGAACAAAC

Downstream 100 bases:

>100_bases
ACGGTGAGCCGGGCTCTTCAGGGAGTCATGCTCTGCGCCCGGCCCTGTCTGTCGCTTTATCTGTAGCCTGTTTGCCCGGG
CGTTTTGCCAGCTCCTCGCG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 166; Mature: 166

Protein sequence:

>166_residues
MNGLLKLLLIGALAYGGYDLYQKHYEVQAEPEVVWQSYVLDTVNISVMFPKAPTVERKSVEGHIVEWQGSRHAAGEYTLV
VIQNPDVTLGDYYPNSLVNKGARLKDKRFIMVDGYDGYEFTLDYNDKLVTQRMISFHNAMVTQTAIYTDHEVNNGDTEKF
LSSLSL

Sequences:

>Translated_166_residues
MNGLLKLLLIGALAYGGYDLYQKHYEVQAEPEVVWQSYVLDTVNISVMFPKAPTVERKSVEGHIVEWQGSRHAAGEYTLV
VIQNPDVTLGDYYPNSLVNKGARLKDKRFIMVDGYDGYEFTLDYNDKLVTQRMISFHNAMVTQTAIYTDHEVNNGDTEKF
LSSLSL
>Mature_166_residues
MNGLLKLLLIGALAYGGYDLYQKHYEVQAEPEVVWQSYVLDTVNISVMFPKAPTVERKSVEGHIVEWQGSRHAAGEYTLV
VIQNPDVTLGDYYPNSLVNKGARLKDKRFIMVDGYDGYEFTLDYNDKLVTQRMISFHNAMVTQTAIYTDHEVNNGDTEKF
LSSLSL

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 18848; Mature: 18848

Theoretical pI: Translated: 4.96; Mature: 4.96

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.0 %Met     (Translated Protein)
3.0 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.0 %Met     (Mature Protein)
3.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNGLLKLLLIGALAYGGYDLYQKHYEVQAEPEVVWQSYVLDTVNISVMFPKAPTVERKSV
CCHHHHHHHHHHHHCCCHHHHHHHCCCCCCHHHHHHHHEEEEEEEEEEECCCCCCCCCCC
EGHIVEWQGSRHAAGEYTLVVIQNPDVTLGDYYPNSLVNKGARLKDKRFIMVDGYDGYEF
CCEEEEECCCCCCCCCEEEEEECCCCEEECCCCCHHHHCCCCCCCCCEEEEEECCCCEEE
TLDYNDKLVTQRMISFHNAMVTQTAIYTDHEVNNGDTEKFLSSLSL
EEECCCHHHHHHHHHHHHHHHHHEEEEECCCCCCCCHHHHHHHHCC
>Mature Secondary Structure
MNGLLKLLLIGALAYGGYDLYQKHYEVQAEPEVVWQSYVLDTVNISVMFPKAPTVERKSV
CCHHHHHHHHHHHHCCCHHHHHHHCCCCCCHHHHHHHHEEEEEEEEEEECCCCCCCCCCC
EGHIVEWQGSRHAAGEYTLVVIQNPDVTLGDYYPNSLVNKGARLKDKRFIMVDGYDGYEF
CCEEEEECCCCCCCCCEEEEEECCCCEEECCCCCHHHHCCCCCCCCCEEEEEECCCCEEE
TLDYNDKLVTQRMISFHNAMVTQTAIYTDHEVNNGDTEKFLSSLSL
EEECCCHHHHHHHHHHHHHHHHHEEEEECCCCCCCCHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA