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The map label for this gene is nqrC [H]

Identifier: 119776111

GI number: 119776111

Start: 3548616

End: 3549380

Strand: Reverse

Name: nqrC [H]

Synonym: Sama_2979

Alternate gene names: 119776111

Gene position: 3549380-3548616 (Counterclockwise)

Preceding gene: 119776112

Following gene: 119776110

Centisome position: 82.43

GC content: 58.82

Gene sequence:

>765_bases
ATGGCCTTTAACAAAGACAGTGTTCTCGGCACCATGACCTTCACGGTCGTTCTGTGCCTGGTGTGCTCCTTTATGATCAC
CGGCACCGCCGATGTGCTCAAGGAGCGCAAGTTGGTGAAAAAGCGCAACGAGCTGATGCAAAACGTGCTGATTGCCGCCG
ACATCAAGGATGTCAGTGATGTCAAAGCCACCTTCGAAGCGCGGGTTCGCCCGGTGATGGTAAACCTCGCCACAGGCGAG
CTGCATGAGCGCGACAACATTCTCGACTATGACGAGCGCATGGCGGCCATCAACCCGGAGACTTCCAGCAAGATTGCCAA
AGACACGGCCCGCATCAAGACCCGCGCCAACGAAATCCGCATCTTCAAGGTGCTGGACGACAAGGGCGAGCTGCAGGCAC
TGGTGCTGCCGGTGTACGGCAAGGGGCTGTGGTCGATTATCTACGGCTTTGTGGGGGTGAAGGCCGACTTCAACACCATC
ACGGGCGCTGTGTTTTACGAGCACGGTGAAACCCCGGGTATCGGCGACTTTATCAATCACGACGACTGGCTCGCCAAGTG
GCAGGGTAAGCAAATCTTCAACGCCAAGGGCGATGTGGCCTTCAAGATTGTGAAGGGCGAAGCCAAGGCCGGTGATTTGA
GCGCCGTGGATGGCGTGAGCGGTGCCACCCGCACAGGTGCGGGCGTGGCCAAGGCGGTGCAGTTCTGGTTTGGCCCCGAA
GGCTTTGAAGCCGCGCTGGGCAAACTGAAAGCGGCGGGGGTGTGA

Upstream 100 bases:

>100_bases
CCCGAGGGCATCATGCTGGCGATTCTGTTCGCCAACCTGTGGGCGCCTGTGCTGGATTCGCTGGTGGCAAGATTCAATAT
CAAACGGAGGCTGAAGCGCA

Downstream 100 bases:

>100_bases
GATGAGCGCAGTATTATCCAATCGTGAACTCCTGATGCGCCCGGTGTTTGCCAATAACCCGGTGGCCATGCAGGTGCTGG
GGGTCTGTTCGGCCCTGGCG

Product: Na(+)-translocating NADH-quinone reductase subunit C

Products: NA

Alternate protein names: Na(+)-NQR subunit C; Na(+)-translocating NQR subunit C; NQR complex subunit C; NQR-1 subunit C [H]

Number of amino acids: Translated: 254; Mature: 253

Protein sequence:

>254_residues
MAFNKDSVLGTMTFTVVLCLVCSFMITGTADVLKERKLVKKRNELMQNVLIAADIKDVSDVKATFEARVRPVMVNLATGE
LHERDNILDYDERMAAINPETSSKIAKDTARIKTRANEIRIFKVLDDKGELQALVLPVYGKGLWSIIYGFVGVKADFNTI
TGAVFYEHGETPGIGDFINHDDWLAKWQGKQIFNAKGDVAFKIVKGEAKAGDLSAVDGVSGATRTGAGVAKAVQFWFGPE
GFEAALGKLKAAGV

Sequences:

>Translated_254_residues
MAFNKDSVLGTMTFTVVLCLVCSFMITGTADVLKERKLVKKRNELMQNVLIAADIKDVSDVKATFEARVRPVMVNLATGE
LHERDNILDYDERMAAINPETSSKIAKDTARIKTRANEIRIFKVLDDKGELQALVLPVYGKGLWSIIYGFVGVKADFNTI
TGAVFYEHGETPGIGDFINHDDWLAKWQGKQIFNAKGDVAFKIVKGEAKAGDLSAVDGVSGATRTGAGVAKAVQFWFGPE
GFEAALGKLKAAGV
>Mature_253_residues
AFNKDSVLGTMTFTVVLCLVCSFMITGTADVLKERKLVKKRNELMQNVLIAADIKDVSDVKATFEARVRPVMVNLATGEL
HERDNILDYDERMAAINPETSSKIAKDTARIKTRANEIRIFKVLDDKGELQALVLPVYGKGLWSIIYGFVGVKADFNTIT
GAVFYEHGETPGIGDFINHDDWLAKWQGKQIFNAKGDVAFKIVKGEAKAGDLSAVDGVSGATRTGAGVAKAVQFWFGPEG
FEAALGKLKAAGV

Specific function: NQR complex catalyzes the reduction of ubiquinone-1 to ubiquinol by two successive reactions, coupled with the transport of Na(+) ions from the cytoplasm to the periplasm. NqrA to nqrE are probably involved in the second step, the conversion of ubisemiqui

COG id: COG2869

COG function: function code C; Na+-transporting NADH:ubiquinone oxidoreductase, subunit NqrC

Gene ontology:

Cell location: Cell inner membrane (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the nqrC family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR007329
- InterPro:   IPR010204 [H]

Pfam domain/function: PF04205 FMN_bind [H]

EC number: NA

Molecular weight: Translated: 27620; Mature: 27489

Theoretical pI: Translated: 8.20; Mature: 8.20

Prosite motif: PS00024 HEMOPEXIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
3.1 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
2.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAFNKDSVLGTMTFTVVLCLVCSFMITGTADVLKERKLVKKRNELMQNVLIAADIKDVSD
CCCCCCHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHH
VKATFEARVRPVMVNLATGELHERDNILDYDERMAAINPETSSKIAKDTARIKTRANEIR
HHHHHHHCCCEEEEEECCCCHHCCCCCCCHHHHHEECCCCHHHHHHHHHHHHHHCCCEEE
IFKVLDDKGELQALVLPVYGKGLWSIIYGFVGVKADFNTITGAVFYEHGETPGIGDFINH
EEEEECCCCCEEEEEEEHHCCHHHHHHHHHHCCCCCCCHHEEEEEEECCCCCCCCCCCCC
DDWLAKWQGKQIFNAKGDVAFKIVKGEAKAGDLSAVDGVSGATRTGAGVAKAVQFWFGPE
CHHHHHCCCCEEECCCCCEEEEEEECCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCC
GFEAALGKLKAAGV
HHHHHHHHHHHCCC
>Mature Secondary Structure 
AFNKDSVLGTMTFTVVLCLVCSFMITGTADVLKERKLVKKRNELMQNVLIAADIKDVSD
CCCCCHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHH
VKATFEARVRPVMVNLATGELHERDNILDYDERMAAINPETSSKIAKDTARIKTRANEIR
HHHHHHHCCCEEEEEECCCCHHCCCCCCCHHHHHEECCCCHHHHHHHHHHHHHHCCCEEE
IFKVLDDKGELQALVLPVYGKGLWSIIYGFVGVKADFNTITGAVFYEHGETPGIGDFINH
EEEEECCCCCEEEEEEEHHCCHHHHHHHHHHCCCCCCCHHEEEEEEECCCCCCCCCCCCC
DDWLAKWQGKQIFNAKGDVAFKIVKGEAKAGDLSAVDGVSGATRTGAGVAKAVQFWFGPE
CHHHHHCCCCEEECCCCCEEEEEEECCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCC
GFEAALGKLKAAGV
HHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: NA