| Definition | Shewanella amazonensis SB2B chromosome, complete genome. |
|---|---|
| Accession | NC_008700 |
| Length | 4,306,142 |
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The map label for this gene is 119776107
Identifier: 119776107
GI number: 119776107
Start: 3545529
End: 3546023
Strand: Reverse
Name: 119776107
Synonym: Sama_2975
Alternate gene names: NA
Gene position: 3546023-3545529 (Counterclockwise)
Preceding gene: 119776108
Following gene: 119776105
Centisome position: 82.35
GC content: 58.38
Gene sequence:
>495_bases ATGGAGCTTTGTAAAGCGACGGCAGAGGATGCACAGGCGATATGGGATTTACGCAACAGCGCCATTCTTGTGGGTTGCAA GGGCTTTTACGACGATAAGAGTCTCGCACGCTGGACCGAAGGTGAGTTGACCCAGAGCTTTACCGCCGTGGTGGCTCAGG GCTTTTATGTGATGAAAGATGGCGCCCGGGTGGTAGGCAGCATCATGTTGGACCTGACCCATCCGGAGCTTCAGAACGGT GAAGGTCAACTCGAGGCGGTGTTTGTCGCCCCGGACATGATGGGGCGCGGCGTGGGTAAGCAGCTGATGGCCTTTGTGGA AGAGCTGGCCCTGGCGCAGGGTATCAACAGGCTCCGGCTGGAGTCCACCCTCAATGCCGTGCCCTTCTATCGAGCGTGCG GCTTTGGGGAAGAGGTGCGCTCGCGCTACCACAGCCCCCGGGGTTTTACCCTGGATTGCTGCATTATGTACAAGAATCTG ACTGCCAGGCCCTGA
Upstream 100 bases:
>100_bases ACATCCCTCAATCCCCACCGACAGGTGGGGATTTTTTTTACGTTTTTTCAAGTGATTGACCATGATATGTTAGTGAAAAT TGGCCAGAGCAGGAGTGGCA
Downstream 100 bases:
>100_bases TGTGTCAGGTAATGCCGAGGGGCCAGGATTGCAGCACTTCATAACGAACACCGGCAGGGGTGCTGTTGGAAAGGTAGAGA TTAAGGCGCTCGGGCCGCAG
Product: acetyltransferase
Products: NA
Alternate protein names: Acetyltransferase; Acetyltransferase GNAT Family; Acetyltransferase Gnat Family; GCN5-Like N-Acetyltransferase; Acyltransferase; Tautomerase
Number of amino acids: Translated: 164; Mature: 164
Protein sequence:
>164_residues MELCKATAEDAQAIWDLRNSAILVGCKGFYDDKSLARWTEGELTQSFTAVVAQGFYVMKDGARVVGSIMLDLTHPELQNG EGQLEAVFVAPDMMGRGVGKQLMAFVEELALAQGINRLRLESTLNAVPFYRACGFGEEVRSRYHSPRGFTLDCCIMYKNL TARP
Sequences:
>Translated_164_residues MELCKATAEDAQAIWDLRNSAILVGCKGFYDDKSLARWTEGELTQSFTAVVAQGFYVMKDGARVVGSIMLDLTHPELQNG EGQLEAVFVAPDMMGRGVGKQLMAFVEELALAQGINRLRLESTLNAVPFYRACGFGEEVRSRYHSPRGFTLDCCIMYKNL TARP >Mature_164_residues MELCKATAEDAQAIWDLRNSAILVGCKGFYDDKSLARWTEGELTQSFTAVVAQGFYVMKDGARVVGSIMLDLTHPELQNG EGQLEAVFVAPDMMGRGVGKQLMAFVEELALAQGINRLRLESTLNAVPFYRACGFGEEVRSRYHSPRGFTLDCCIMYKNL TARP
Specific function: Unknown
COG id: COG0454
COG function: function code KR; Histone acetyltransferase HPA2 and related acetyltransferases
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 18164; Mature: 18164
Theoretical pI: Translated: 5.27; Mature: 5.27
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
3.0 %Cys (Translated Protein) 4.3 %Met (Translated Protein) 7.3 %Cys+Met (Translated Protein) 3.0 %Cys (Mature Protein) 4.3 %Met (Mature Protein) 7.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MELCKATAEDAQAIWDLRNSAILVGCKGFYDDKSLARWTEGELTQSFTAVVAQGFYVMKD CCCHHHHHHHHHHHHHCCCCEEEEEECCCCCCCHHHHCCCCHHHHHHHHHHHCCCEEEEC GARVVGSIMLDLTHPELQNGEGQLEAVFVAPDMMGRGVGKQLMAFVEELALAQGINRLRL HHHHHHHHHHHCCCCCCCCCCCCEEEEEECCHHHCCCHHHHHHHHHHHHHHHHCHHHHHH ESTLNAVPFYRACGFGEEVRSRYHSPRGFTLDCCIMYKNLTARP HHHHCCCCHHHHCCCCHHHHHHHCCCCCCEEEEEEEECCCCCCC >Mature Secondary Structure MELCKATAEDAQAIWDLRNSAILVGCKGFYDDKSLARWTEGELTQSFTAVVAQGFYVMKD CCCHHHHHHHHHHHHHCCCCEEEEEECCCCCCCHHHHCCCCHHHHHHHHHHHCCCEEEEC GARVVGSIMLDLTHPELQNGEGQLEAVFVAPDMMGRGVGKQLMAFVEELALAQGINRLRL HHHHHHHHHHHCCCCCCCCCCCCEEEEEECCHHHCCCHHHHHHHHHHHHHHHHCHHHHHH ESTLNAVPFYRACGFGEEVRSRYHSPRGFTLDCCIMYKNLTARP HHHHCCCCHHHHCCCCHHHHHHHCCCCCCEEEEEEEECCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA