| Definition | Shewanella amazonensis SB2B chromosome, complete genome. |
|---|---|
| Accession | NC_008700 |
| Length | 4,306,142 |
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The map label for this gene is 119776093
Identifier: 119776093
GI number: 119776093
Start: 3525771
End: 3526076
Strand: Reverse
Name: 119776093
Synonym: Sama_2961
Alternate gene names: NA
Gene position: 3526076-3525771 (Counterclockwise)
Preceding gene: 119776094
Following gene: 119776085
Centisome position: 81.88
GC content: 50.65
Gene sequence:
>306_bases TTGGGTTCGAATGAGCTTTTAATTCACTCCGACCCCTTTATCCACATAAGCCGCGAGAGCGGCAGTTACACAGGTAAACG GCGTATTCGCGGCGGCCGAGCCAGAGTGCGAACTGTGATGTTTATGGCCATGATGTCAGCCATCCAGTGCAACCCTATTT TCAAACGCTACTACGAACACTTAAAGGCGCAGGGAAAGCTGCCCAAGGTGGCGATAATTGCTTGCATGCGGAAGCTCTTG GTCACCCTCAATACCATGATGAAAAACGGAACTCGCTGGGGCGAAAAATCACCTGAATTGGCGTAA
Upstream 100 bases:
>100_bases CCCTGCGGCCGCTTCGAGCGGGATTTGGTGCATTCCTCGGCAAAAGTGTTATGGCTGTCCTGTCTTTCGTCTGTGGGAGC GTCCAGATATGTCCTGAGTT
Downstream 100 bases:
>100_bases TAAATATTGACGGAATGCCACAGTCACTTGTTAGGCGATTTATCACAACAGATTACAATACACTCTGACAATCTTACCAT CATATTTTTCAGCATATACT
Product: hypothetical protein
Products: NA
Alternate protein names: ISCps7 Transposase; ISSwp5 Transposase
Number of amino acids: Translated: 101; Mature: 100
Protein sequence:
>101_residues MGSNELLIHSDPFIHISRESGSYTGKRRIRGGRARVRTVMFMAMMSAIQCNPIFKRYYEHLKAQGKLPKVAIIACMRKLL VTLNTMMKNGTRWGEKSPELA
Sequences:
>Translated_101_residues MGSNELLIHSDPFIHISRESGSYTGKRRIRGGRARVRTVMFMAMMSAIQCNPIFKRYYEHLKAQGKLPKVAIIACMRKLL VTLNTMMKNGTRWGEKSPELA >Mature_100_residues GSNELLIHSDPFIHISRESGSYTGKRRIRGGRARVRTVMFMAMMSAIQCNPIFKRYYEHLKAQGKLPKVAIIACMRKLLV TLNTMMKNGTRWGEKSPELA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 11528; Mature: 11397
Theoretical pI: Translated: 11.20; Mature: 11.20
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.0 %Cys (Translated Protein) 7.9 %Met (Translated Protein) 9.9 %Cys+Met (Translated Protein) 2.0 %Cys (Mature Protein) 7.0 %Met (Mature Protein) 9.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGSNELLIHSDPFIHISRESGSYTGKRRIRGGRARVRTVMFMAMMSAIQCNPIFKRYYEH CCCCCEEEECCCEEEEECCCCCCCCHHHHCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHH LKAQGKLPKVAIIACMRKLLVTLNTMMKNGTRWGEKSPELA HHHCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCC >Mature Secondary Structure GSNELLIHSDPFIHISRESGSYTGKRRIRGGRARVRTVMFMAMMSAIQCNPIFKRYYEH CCCCEEEECCCEEEEECCCCCCCCHHHHCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHH LKAQGKLPKVAIIACMRKLLVTLNTMMKNGTRWGEKSPELA HHHCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA