Definition Shewanella amazonensis SB2B chromosome, complete genome.
Accession NC_008700
Length 4,306,142

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The map label for this gene is 119775947

Identifier: 119775947

GI number: 119775947

Start: 3352665

End: 3353711

Strand: Reverse

Name: 119775947

Synonym: Sama_2815

Alternate gene names: NA

Gene position: 3353711-3352665 (Counterclockwise)

Preceding gene: 119775955

Following gene: 119775946

Centisome position: 77.88

GC content: 55.21

Gene sequence:

>1047_bases
ATGCTGGCTATAATAAAGCAATTTTTTGCCAAGAGCCATGGAACGACCGTGTCAGACTCGAGATTTCTTGCCCTTAATCA
TTGGCTTTCCAACACCTTTGGAGAGCCGCTTTCCCCAGTGCTGATTTCCGGCGATGCCAGCTTCAGGCGCTACTTTCGCG
CGGTGCATCAGGGCCGCGCCATGGTGATCATGGATACCCCGGTCGCCCTGATCCCCACCGAGCCCTTTGTGGCTGTGCGC
AATGCCTACGCCGCAAGCGGTCTGCCGGTACCCGGCATCATTGCCAAAGACGACGAGCAGGGCTTTATGGCGCTGGAGGA
CTTTGGCGATGTACAGCTTTTGTCGCTGCTGAACAGTCAAAGTGTGCGTCACTGGTATCCCAGGGCGCTGGCACTCTTGC
CGGGCATTGCAGCGGTAACCCAAACGGTGCTGGGGCCATTGCCCGACTATGATGATGCCTTTGTACGCCGTGAACTCGGC
ATCTTTACTGAGTGGCTGCTTGGCACCCATCTCAAGCTGGAATTAACCAGCGACGAAGAGGCCATCATTGCAGACGCTTT
CGATATGCTGACCCAAAACGCTCTGGAGCAACCCAAGGTGGGAATGCACAGAGACTTCCACAGCCGTAATCTGATGGTTG
TTGATGGAGAGCTTAAGTTGCTGGATTTTCAGGATGCTGTGCTTGGACCTGTGACCTATGATGCTGTGTCGCTGCTGCGG
GACTGTTACATTCGCTGGAGCGAAGATCTGGTGGATGACATGTTGGTGGAATTTTTTGTGCTGGCCCACGAGCACGCATT
GGTTCCGCCACACACAGATATGGTGCAGTTCAGACGTTGGTTTGAGCTCATGGGGCTGCAGCGTCATATCAAGGCAGCCG
GCATTTTTGCGCGCCTCAATCACAGAGATGGCAAGGCCGGTTACCTCAAGGACATTCCACTCACCATGCACTATATCCGC
GATGTGGCGGTGCGCTACAAGGAGCTTGGCGACTTTGCCCAGTTTATCATGAGGCGGGTCATGCCGGCGCTGGAGGCTGG
AGCATGA

Upstream 100 bases:

>100_bases
GGGCTTTAACTGGAAACTGAGAGGAGGGAAAAGTTGCACTCGTCTCCAGTACAATCAAGCCAATAGGACTGTATCAACGA
ATTGGCTGTTTCCATTAAAT

Downstream 100 bases:

>100_bases
AAGCCATGATCCTCGCCGCGGGGCGGGGCGAGCGCTTGCGACCGCTCACAGACACAGTCCCCAAGCCGCTGGTGCAAGCC
GCTGGCAAACCCCTGATTGA

Product: phosphotransferase

Products: NA

Alternate protein names: Phosphotransferase; Phosphotransferase Family Protein; Phosphotransferase Related Ser/Thr Protein Kinase; Phosphotransferase Family; Phosphotransferase Family Protein; .5 Kda Chlorosome Protein; Chlorosome Protein; Bifunctional ATPase/Phosphotransferase; P-Loop Hydrolase; Two-Component Fusion Protein; Putatuive Aminoglycoside Phosphotransferase; Ser/Thr Kinase-Like Phosphotransferase; ATPase; P-Loop Hydrolase/Phosphotransferase; Phosphotransferase Protein

Number of amino acids: Translated: 348; Mature: 348

Protein sequence:

>348_residues
MLAIIKQFFAKSHGTTVSDSRFLALNHWLSNTFGEPLSPVLISGDASFRRYFRAVHQGRAMVIMDTPVALIPTEPFVAVR
NAYAASGLPVPGIIAKDDEQGFMALEDFGDVQLLSLLNSQSVRHWYPRALALLPGIAAVTQTVLGPLPDYDDAFVRRELG
IFTEWLLGTHLKLELTSDEEAIIADAFDMLTQNALEQPKVGMHRDFHSRNLMVVDGELKLLDFQDAVLGPVTYDAVSLLR
DCYIRWSEDLVDDMLVEFFVLAHEHALVPPHTDMVQFRRWFELMGLQRHIKAAGIFARLNHRDGKAGYLKDIPLTMHYIR
DVAVRYKELGDFAQFIMRRVMPALEAGA

Sequences:

>Translated_348_residues
MLAIIKQFFAKSHGTTVSDSRFLALNHWLSNTFGEPLSPVLISGDASFRRYFRAVHQGRAMVIMDTPVALIPTEPFVAVR
NAYAASGLPVPGIIAKDDEQGFMALEDFGDVQLLSLLNSQSVRHWYPRALALLPGIAAVTQTVLGPLPDYDDAFVRRELG
IFTEWLLGTHLKLELTSDEEAIIADAFDMLTQNALEQPKVGMHRDFHSRNLMVVDGELKLLDFQDAVLGPVTYDAVSLLR
DCYIRWSEDLVDDMLVEFFVLAHEHALVPPHTDMVQFRRWFELMGLQRHIKAAGIFARLNHRDGKAGYLKDIPLTMHYIR
DVAVRYKELGDFAQFIMRRVMPALEAGA
>Mature_348_residues
MLAIIKQFFAKSHGTTVSDSRFLALNHWLSNTFGEPLSPVLISGDASFRRYFRAVHQGRAMVIMDTPVALIPTEPFVAVR
NAYAASGLPVPGIIAKDDEQGFMALEDFGDVQLLSLLNSQSVRHWYPRALALLPGIAAVTQTVLGPLPDYDDAFVRRELG
IFTEWLLGTHLKLELTSDEEAIIADAFDMLTQNALEQPKVGMHRDFHSRNLMVVDGELKLLDFQDAVLGPVTYDAVSLLR
DCYIRWSEDLVDDMLVEFFVLAHEHALVPPHTDMVQFRRWFELMGLQRHIKAAGIFARLNHRDGKAGYLKDIPLTMHYIR
DVAVRYKELGDFAQFIMRRVMPALEAGA

Specific function: Unknown

COG id: COG3178

COG function: function code R; Predicted phosphotransferase related to Ser/Thr protein kinases

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 39251; Mature: 39251

Theoretical pI: Translated: 5.89; Mature: 5.89

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
3.7 %Met     (Translated Protein)
4.0 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
3.7 %Met     (Mature Protein)
4.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLAIIKQFFAKSHGTTVSDSRFLALNHWLSNTFGEPLSPVLISGDASFRRYFRAVHQGRA
CHHHHHHHHHHCCCCCCCCCEEEEHHHHHHHHCCCCCCCEEECCCHHHHHHHHHHHCCCE
MVIMDTPVALIPTEPFVAVRNAYAASGLPVPGIIAKDDEQGFMALEDFGDVQLLSLLNSQ
EEEEECCEEEECCCCHHHHHHHHHCCCCCCCCEEECCCCCCCEEHHHCCCHHHHHHHCCC
SVRHWYPRALALLPGIAAVTQTVLGPLPDYDDAFVRRELGIFTEWLLGTHLKLELTSDEE
HHHHHHHHHHHHHCCHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHCCCEEEEECCCCC
AIIADAFDMLTQNALEQPKVGMHRDFHSRNLMVVDGELKLLDFQDAVLGPVTYDAVSLLR
HHHHHHHHHHHHHHHCCCCCCCCCCCCCCCEEEECCCEEEEECCHHHHCCHHHHHHHHHH
DCYIRWSEDLVDDMLVEFFVLAHEHALVPPHTDMVQFRRWFELMGLQRHIKAAGIFARLN
HHHHHCCHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHEEC
HRDGKAGYLKDIPLTMHYIRDVAVRYKELGDFAQFIMRRVMPALEAGA
CCCCCCCCEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MLAIIKQFFAKSHGTTVSDSRFLALNHWLSNTFGEPLSPVLISGDASFRRYFRAVHQGRA
CHHHHHHHHHHCCCCCCCCCEEEEHHHHHHHHCCCCCCCEEECCCHHHHHHHHHHHCCCE
MVIMDTPVALIPTEPFVAVRNAYAASGLPVPGIIAKDDEQGFMALEDFGDVQLLSLLNSQ
EEEEECCEEEECCCCHHHHHHHHHCCCCCCCCEEECCCCCCCEEHHHCCCHHHHHHHCCC
SVRHWYPRALALLPGIAAVTQTVLGPLPDYDDAFVRRELGIFTEWLLGTHLKLELTSDEE
HHHHHHHHHHHHHCCHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHCCCEEEEECCCCC
AIIADAFDMLTQNALEQPKVGMHRDFHSRNLMVVDGELKLLDFQDAVLGPVTYDAVSLLR
HHHHHHHHHHHHHHHCCCCCCCCCCCCCCCEEEECCCEEEEECCHHHHCCHHHHHHHHHH
DCYIRWSEDLVDDMLVEFFVLAHEHALVPPHTDMVQFRRWFELMGLQRHIKAAGIFARLN
HHHHHCCHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHEEC
HRDGKAGYLKDIPLTMHYIRDVAVRYKELGDFAQFIMRRVMPALEAGA
CCCCCCCCEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA