Definition | Shewanella amazonensis SB2B chromosome, complete genome. |
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Accession | NC_008700 |
Length | 4,306,142 |
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The map label for this gene is 119775947
Identifier: 119775947
GI number: 119775947
Start: 3352665
End: 3353711
Strand: Reverse
Name: 119775947
Synonym: Sama_2815
Alternate gene names: NA
Gene position: 3353711-3352665 (Counterclockwise)
Preceding gene: 119775955
Following gene: 119775946
Centisome position: 77.88
GC content: 55.21
Gene sequence:
>1047_bases ATGCTGGCTATAATAAAGCAATTTTTTGCCAAGAGCCATGGAACGACCGTGTCAGACTCGAGATTTCTTGCCCTTAATCA TTGGCTTTCCAACACCTTTGGAGAGCCGCTTTCCCCAGTGCTGATTTCCGGCGATGCCAGCTTCAGGCGCTACTTTCGCG CGGTGCATCAGGGCCGCGCCATGGTGATCATGGATACCCCGGTCGCCCTGATCCCCACCGAGCCCTTTGTGGCTGTGCGC AATGCCTACGCCGCAAGCGGTCTGCCGGTACCCGGCATCATTGCCAAAGACGACGAGCAGGGCTTTATGGCGCTGGAGGA CTTTGGCGATGTACAGCTTTTGTCGCTGCTGAACAGTCAAAGTGTGCGTCACTGGTATCCCAGGGCGCTGGCACTCTTGC CGGGCATTGCAGCGGTAACCCAAACGGTGCTGGGGCCATTGCCCGACTATGATGATGCCTTTGTACGCCGTGAACTCGGC ATCTTTACTGAGTGGCTGCTTGGCACCCATCTCAAGCTGGAATTAACCAGCGACGAAGAGGCCATCATTGCAGACGCTTT CGATATGCTGACCCAAAACGCTCTGGAGCAACCCAAGGTGGGAATGCACAGAGACTTCCACAGCCGTAATCTGATGGTTG TTGATGGAGAGCTTAAGTTGCTGGATTTTCAGGATGCTGTGCTTGGACCTGTGACCTATGATGCTGTGTCGCTGCTGCGG GACTGTTACATTCGCTGGAGCGAAGATCTGGTGGATGACATGTTGGTGGAATTTTTTGTGCTGGCCCACGAGCACGCATT GGTTCCGCCACACACAGATATGGTGCAGTTCAGACGTTGGTTTGAGCTCATGGGGCTGCAGCGTCATATCAAGGCAGCCG GCATTTTTGCGCGCCTCAATCACAGAGATGGCAAGGCCGGTTACCTCAAGGACATTCCACTCACCATGCACTATATCCGC GATGTGGCGGTGCGCTACAAGGAGCTTGGCGACTTTGCCCAGTTTATCATGAGGCGGGTCATGCCGGCGCTGGAGGCTGG AGCATGA
Upstream 100 bases:
>100_bases GGGCTTTAACTGGAAACTGAGAGGAGGGAAAAGTTGCACTCGTCTCCAGTACAATCAAGCCAATAGGACTGTATCAACGA ATTGGCTGTTTCCATTAAAT
Downstream 100 bases:
>100_bases AAGCCATGATCCTCGCCGCGGGGCGGGGCGAGCGCTTGCGACCGCTCACAGACACAGTCCCCAAGCCGCTGGTGCAAGCC GCTGGCAAACCCCTGATTGA
Product: phosphotransferase
Products: NA
Alternate protein names: Phosphotransferase; Phosphotransferase Family Protein; Phosphotransferase Related Ser/Thr Protein Kinase; Phosphotransferase Family; Phosphotransferase Family Protein; .5 Kda Chlorosome Protein; Chlorosome Protein; Bifunctional ATPase/Phosphotransferase; P-Loop Hydrolase; Two-Component Fusion Protein; Putatuive Aminoglycoside Phosphotransferase; Ser/Thr Kinase-Like Phosphotransferase; ATPase; P-Loop Hydrolase/Phosphotransferase; Phosphotransferase Protein
Number of amino acids: Translated: 348; Mature: 348
Protein sequence:
>348_residues MLAIIKQFFAKSHGTTVSDSRFLALNHWLSNTFGEPLSPVLISGDASFRRYFRAVHQGRAMVIMDTPVALIPTEPFVAVR NAYAASGLPVPGIIAKDDEQGFMALEDFGDVQLLSLLNSQSVRHWYPRALALLPGIAAVTQTVLGPLPDYDDAFVRRELG IFTEWLLGTHLKLELTSDEEAIIADAFDMLTQNALEQPKVGMHRDFHSRNLMVVDGELKLLDFQDAVLGPVTYDAVSLLR DCYIRWSEDLVDDMLVEFFVLAHEHALVPPHTDMVQFRRWFELMGLQRHIKAAGIFARLNHRDGKAGYLKDIPLTMHYIR DVAVRYKELGDFAQFIMRRVMPALEAGA
Sequences:
>Translated_348_residues MLAIIKQFFAKSHGTTVSDSRFLALNHWLSNTFGEPLSPVLISGDASFRRYFRAVHQGRAMVIMDTPVALIPTEPFVAVR NAYAASGLPVPGIIAKDDEQGFMALEDFGDVQLLSLLNSQSVRHWYPRALALLPGIAAVTQTVLGPLPDYDDAFVRRELG IFTEWLLGTHLKLELTSDEEAIIADAFDMLTQNALEQPKVGMHRDFHSRNLMVVDGELKLLDFQDAVLGPVTYDAVSLLR DCYIRWSEDLVDDMLVEFFVLAHEHALVPPHTDMVQFRRWFELMGLQRHIKAAGIFARLNHRDGKAGYLKDIPLTMHYIR DVAVRYKELGDFAQFIMRRVMPALEAGA >Mature_348_residues MLAIIKQFFAKSHGTTVSDSRFLALNHWLSNTFGEPLSPVLISGDASFRRYFRAVHQGRAMVIMDTPVALIPTEPFVAVR NAYAASGLPVPGIIAKDDEQGFMALEDFGDVQLLSLLNSQSVRHWYPRALALLPGIAAVTQTVLGPLPDYDDAFVRRELG IFTEWLLGTHLKLELTSDEEAIIADAFDMLTQNALEQPKVGMHRDFHSRNLMVVDGELKLLDFQDAVLGPVTYDAVSLLR DCYIRWSEDLVDDMLVEFFVLAHEHALVPPHTDMVQFRRWFELMGLQRHIKAAGIFARLNHRDGKAGYLKDIPLTMHYIR DVAVRYKELGDFAQFIMRRVMPALEAGA
Specific function: Unknown
COG id: COG3178
COG function: function code R; Predicted phosphotransferase related to Ser/Thr protein kinases
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 39251; Mature: 39251
Theoretical pI: Translated: 5.89; Mature: 5.89
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 3.7 %Met (Translated Protein) 4.0 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 3.7 %Met (Mature Protein) 4.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLAIIKQFFAKSHGTTVSDSRFLALNHWLSNTFGEPLSPVLISGDASFRRYFRAVHQGRA CHHHHHHHHHHCCCCCCCCCEEEEHHHHHHHHCCCCCCCEEECCCHHHHHHHHHHHCCCE MVIMDTPVALIPTEPFVAVRNAYAASGLPVPGIIAKDDEQGFMALEDFGDVQLLSLLNSQ EEEEECCEEEECCCCHHHHHHHHHCCCCCCCCEEECCCCCCCEEHHHCCCHHHHHHHCCC SVRHWYPRALALLPGIAAVTQTVLGPLPDYDDAFVRRELGIFTEWLLGTHLKLELTSDEE HHHHHHHHHHHHHCCHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHCCCEEEEECCCCC AIIADAFDMLTQNALEQPKVGMHRDFHSRNLMVVDGELKLLDFQDAVLGPVTYDAVSLLR HHHHHHHHHHHHHHHCCCCCCCCCCCCCCCEEEECCCEEEEECCHHHHCCHHHHHHHHHH DCYIRWSEDLVDDMLVEFFVLAHEHALVPPHTDMVQFRRWFELMGLQRHIKAAGIFARLN HHHHHCCHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHEEC HRDGKAGYLKDIPLTMHYIRDVAVRYKELGDFAQFIMRRVMPALEAGA CCCCCCCCEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure MLAIIKQFFAKSHGTTVSDSRFLALNHWLSNTFGEPLSPVLISGDASFRRYFRAVHQGRA CHHHHHHHHHHCCCCCCCCCEEEEHHHHHHHHCCCCCCCEEECCCHHHHHHHHHHHCCCE MVIMDTPVALIPTEPFVAVRNAYAASGLPVPGIIAKDDEQGFMALEDFGDVQLLSLLNSQ EEEEECCEEEECCCCHHHHHHHHHCCCCCCCCEEECCCCCCCEEHHHCCCHHHHHHHCCC SVRHWYPRALALLPGIAAVTQTVLGPLPDYDDAFVRRELGIFTEWLLGTHLKLELTSDEE HHHHHHHHHHHHHCCHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHCCCEEEEECCCCC AIIADAFDMLTQNALEQPKVGMHRDFHSRNLMVVDGELKLLDFQDAVLGPVTYDAVSLLR HHHHHHHHHHHHHHHCCCCCCCCCCCCCCCEEEECCCEEEEECCHHHHCCHHHHHHHHHH DCYIRWSEDLVDDMLVEFFVLAHEHALVPPHTDMVQFRRWFELMGLQRHIKAAGIFARLN HHHHHCCHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHEEC HRDGKAGYLKDIPLTMHYIRDVAVRYKELGDFAQFIMRRVMPALEAGA CCCCCCCCEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA