Definition | Shewanella amazonensis SB2B chromosome, complete genome. |
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Accession | NC_008700 |
Length | 4,306,142 |
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The map label for this gene is 119775926
Identifier: 119775926
GI number: 119775926
Start: 3332697
End: 3333761
Strand: Reverse
Name: 119775926
Synonym: Sama_2794
Alternate gene names: NA
Gene position: 3333761-3332697 (Counterclockwise)
Preceding gene: 119775927
Following gene: 119775924
Centisome position: 77.42
GC content: 55.31
Gene sequence:
>1065_bases ATGAACACAAGTGCAACCAAAGAAAGAGTATTGGTGATAGCCCCGGGCCGCGGTTGTTATAACAAAGAGGAACTGGGCTA CCTTAAGCGTCTTCATGGCGATAAGGTCGACTTTATCGCCGGTATCGATGCCTTTCGCCGTCACGAGGGACAAAAATCCA TTGCTGAGCTGGATGCCATGGACAAGTACTCCTTCAAACTGCATACCCCCGGTGAAAATGCCTCGGCACTGATTTACGCC TGCGCCATGGCCGACTTTATGGATATAGACCGCGACCGCTTTGAGATAGTGGCGGTGACCGGGAACTCCATGGGCTGGTA CATTGCCCTTGCCTGCGCCGGTGCGCTGGATGAAGAGGGAGCTATCGGGGTGATTAACACCATGGGTTCCATGATGCAGG ATGGCCTGATTGGTGGGCAGATGATATATCCCGAGATGGATGATAACTGGCATCCGAGTCCCGTCAGGACGCAAATGCTG GATAAGCTGCTGGCCGAAGCTGAGGCCACTGAAGGCTGTGCGCTGTACACCTCGATTCACCTCGGTGGATTCCGGGTGCT GGCGGGTAACGAAGCGGGGCTCAAACTGGCCGAAGAGCGATTGCCAAAAATCGATGAGCGTTATCCCATGCGGCTCTATA ACCACGGCGCCTTTCACTCGCCGCTGTTAACCGAGGTATCGGCCAAGGGCAAAAGTCTGTTGCCAAAGAGCTTCTTTAAA GCGCCCAATGTCCCTTTGGTGGACGGCCGCGGCGCCATCTGGACCCAATACAGCACAGACACTGAAAAGCTGTGGGAATA CACCCTGGGGCATCAGGTTACCGAGCCCTATGATTTCACCCGCGCGGTGCAGGTAGCGGTGAAAGAATTTGCACCCGACA GAGTGATGATACTGGGGCCGGGCACCACCCTTGGCGGCGCTGTGGCCCAGAGTCTCATTGGATGCCATTGGTTTGGCTGG CAGCAAAAAAAGGATTTCAGTGAGGGGCAAAAAGTCGATACCCGACTTATCGCTATGGGGATGGACGCCCAGCGGCCATT GGCACTGAAGCCCGGCAGTCAATAA
Upstream 100 bases:
>100_bases ACAGCATAGTGGCTGCTGCCCTCAAGCTGGTGCAGGGCTCGGATGCTGGCACAGGCAAGGGCACTGACACAGGCATAGTG ATTGGACTGGAGGCATCGGC
Downstream 100 bases:
>100_bases TCACGACCTTGAGAAACACAAAACGGCCCAAGGGCCGTTTTGTATTTTCGACTTCAGACTGGTTCAGTCGAGATCTTGTT GCACCACCGCCAAATAGCCC
Product: (acyl-carrier-protein) S-malonyltransferase
Products: NA
Alternate protein names: Acyl-Carrier Domain Protein; Malonyl CoA-Acyl Carrier Protein Transacylase; Acyl-Carrier Domain-Containing Protein; (Acyl-Carrier-Protein) S-Malonyltransferase-Like Protein; Acyl-Carrier Protein; Malonyl-CoA-[Acyl-Carrier-Protein] Transacylase
Number of amino acids: Translated: 354; Mature: 354
Protein sequence:
>354_residues MNTSATKERVLVIAPGRGCYNKEELGYLKRLHGDKVDFIAGIDAFRRHEGQKSIAELDAMDKYSFKLHTPGENASALIYA CAMADFMDIDRDRFEIVAVTGNSMGWYIALACAGALDEEGAIGVINTMGSMMQDGLIGGQMIYPEMDDNWHPSPVRTQML DKLLAEAEATEGCALYTSIHLGGFRVLAGNEAGLKLAEERLPKIDERYPMRLYNHGAFHSPLLTEVSAKGKSLLPKSFFK APNVPLVDGRGAIWTQYSTDTEKLWEYTLGHQVTEPYDFTRAVQVAVKEFAPDRVMILGPGTTLGGAVAQSLIGCHWFGW QQKKDFSEGQKVDTRLIAMGMDAQRPLALKPGSQ
Sequences:
>Translated_354_residues MNTSATKERVLVIAPGRGCYNKEELGYLKRLHGDKVDFIAGIDAFRRHEGQKSIAELDAMDKYSFKLHTPGENASALIYA CAMADFMDIDRDRFEIVAVTGNSMGWYIALACAGALDEEGAIGVINTMGSMMQDGLIGGQMIYPEMDDNWHPSPVRTQML DKLLAEAEATEGCALYTSIHLGGFRVLAGNEAGLKLAEERLPKIDERYPMRLYNHGAFHSPLLTEVSAKGKSLLPKSFFK APNVPLVDGRGAIWTQYSTDTEKLWEYTLGHQVTEPYDFTRAVQVAVKEFAPDRVMILGPGTTLGGAVAQSLIGCHWFGW QQKKDFSEGQKVDTRLIAMGMDAQRPLALKPGSQ >Mature_354_residues MNTSATKERVLVIAPGRGCYNKEELGYLKRLHGDKVDFIAGIDAFRRHEGQKSIAELDAMDKYSFKLHTPGENASALIYA CAMADFMDIDRDRFEIVAVTGNSMGWYIALACAGALDEEGAIGVINTMGSMMQDGLIGGQMIYPEMDDNWHPSPVRTQML DKLLAEAEATEGCALYTSIHLGGFRVLAGNEAGLKLAEERLPKIDERYPMRLYNHGAFHSPLLTEVSAKGKSLLPKSFFK APNVPLVDGRGAIWTQYSTDTEKLWEYTLGHQVTEPYDFTRAVQVAVKEFAPDRVMILGPGTTLGGAVAQSLIGCHWFGW QQKKDFSEGQKVDTRLIAMGMDAQRPLALKPGSQ
Specific function: Unknown
COG id: COG0331
COG function: function code I; (acyl-carrier-protein) S-malonyltransferase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 39016; Mature: 39016
Theoretical pI: Translated: 5.85; Mature: 5.85
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 4.2 %Met (Translated Protein) 5.6 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 4.2 %Met (Mature Protein) 5.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNTSATKERVLVIAPGRGCYNKEELGYLKRLHGDKVDFIAGIDAFRRHEGQKSIAELDAM CCCCCCCCEEEEEECCCCCCCHHHHHHHHHHCCCCCHHHHHHHHHHHCCCHHHHHHHHCC DKYSFKLHTPGENASALIYACAMADFMDIDRDRFEIVAVTGNSMGWYIALACAGALDEEG CCCEEEEECCCCCCCHHHHHHHHHHHHHCCCCCEEEEEEECCCCCEEEEEEECCCCCCCC AIGVINTMGSMMQDGLIGGQMIYPEMDDNWHPSPVRTQMLDKLLAEAEATEGCALYTSIH CEEHHHHHHHHHHCCCCCCEEECCCCCCCCCCCHHHHHHHHHHHHHHCCCCCEEEEEEEE LGGFRVLAGNEAGLKLAEERLPKIDERYPMRLYNHGAFHSPLLTEVSAKGKSLLPKSFFK ECCEEEEECCCCCCHHHHHHCCCCCCCCCHHEECCCCCCCCHHHHHHCCCCCCCCHHHHC APNVPLVDGRGAIWTQYSTDTEKLWEYTLGHQVTEPYDFTRAVQVAVKEFAPDRVMILGP CCCCCEECCCCCEEEECCCCHHHHHHHHHCCCCCCCHHHHHHHHHHHHHCCCCEEEEEEC GTTLGGAVAQSLIGCHWFGWQQKKDFSEGQKVDTRLIAMGMDAQRPLALKPGSQ CCCHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHEEEEECCCCCCCCCCCCCCC >Mature Secondary Structure MNTSATKERVLVIAPGRGCYNKEELGYLKRLHGDKVDFIAGIDAFRRHEGQKSIAELDAM CCCCCCCCEEEEEECCCCCCCHHHHHHHHHHCCCCCHHHHHHHHHHHCCCHHHHHHHHCC DKYSFKLHTPGENASALIYACAMADFMDIDRDRFEIVAVTGNSMGWYIALACAGALDEEG CCCEEEEECCCCCCCHHHHHHHHHHHHHCCCCCEEEEEEECCCCCEEEEEEECCCCCCCC AIGVINTMGSMMQDGLIGGQMIYPEMDDNWHPSPVRTQMLDKLLAEAEATEGCALYTSIH CEEHHHHHHHHHHCCCCCCEEECCCCCCCCCCCHHHHHHHHHHHHHHCCCCCEEEEEEEE LGGFRVLAGNEAGLKLAEERLPKIDERYPMRLYNHGAFHSPLLTEVSAKGKSLLPKSFFK ECCEEEEECCCCCCHHHHHHCCCCCCCCCHHEECCCCCCCCHHHHHHCCCCCCCCHHHHC APNVPLVDGRGAIWTQYSTDTEKLWEYTLGHQVTEPYDFTRAVQVAVKEFAPDRVMILGP CCCCCEECCCCCEEEECCCCHHHHHHHHHCCCCCCCHHHHHHHHHHHHHCCCCEEEEEEC GTTLGGAVAQSLIGCHWFGWQQKKDFSEGQKVDTRLIAMGMDAQRPLALKPGSQ CCCHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHEEEEECCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA