Definition Shewanella amazonensis SB2B chromosome, complete genome.
Accession NC_008700
Length 4,306,142

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The map label for this gene is 119775926

Identifier: 119775926

GI number: 119775926

Start: 3332697

End: 3333761

Strand: Reverse

Name: 119775926

Synonym: Sama_2794

Alternate gene names: NA

Gene position: 3333761-3332697 (Counterclockwise)

Preceding gene: 119775927

Following gene: 119775924

Centisome position: 77.42

GC content: 55.31

Gene sequence:

>1065_bases
ATGAACACAAGTGCAACCAAAGAAAGAGTATTGGTGATAGCCCCGGGCCGCGGTTGTTATAACAAAGAGGAACTGGGCTA
CCTTAAGCGTCTTCATGGCGATAAGGTCGACTTTATCGCCGGTATCGATGCCTTTCGCCGTCACGAGGGACAAAAATCCA
TTGCTGAGCTGGATGCCATGGACAAGTACTCCTTCAAACTGCATACCCCCGGTGAAAATGCCTCGGCACTGATTTACGCC
TGCGCCATGGCCGACTTTATGGATATAGACCGCGACCGCTTTGAGATAGTGGCGGTGACCGGGAACTCCATGGGCTGGTA
CATTGCCCTTGCCTGCGCCGGTGCGCTGGATGAAGAGGGAGCTATCGGGGTGATTAACACCATGGGTTCCATGATGCAGG
ATGGCCTGATTGGTGGGCAGATGATATATCCCGAGATGGATGATAACTGGCATCCGAGTCCCGTCAGGACGCAAATGCTG
GATAAGCTGCTGGCCGAAGCTGAGGCCACTGAAGGCTGTGCGCTGTACACCTCGATTCACCTCGGTGGATTCCGGGTGCT
GGCGGGTAACGAAGCGGGGCTCAAACTGGCCGAAGAGCGATTGCCAAAAATCGATGAGCGTTATCCCATGCGGCTCTATA
ACCACGGCGCCTTTCACTCGCCGCTGTTAACCGAGGTATCGGCCAAGGGCAAAAGTCTGTTGCCAAAGAGCTTCTTTAAA
GCGCCCAATGTCCCTTTGGTGGACGGCCGCGGCGCCATCTGGACCCAATACAGCACAGACACTGAAAAGCTGTGGGAATA
CACCCTGGGGCATCAGGTTACCGAGCCCTATGATTTCACCCGCGCGGTGCAGGTAGCGGTGAAAGAATTTGCACCCGACA
GAGTGATGATACTGGGGCCGGGCACCACCCTTGGCGGCGCTGTGGCCCAGAGTCTCATTGGATGCCATTGGTTTGGCTGG
CAGCAAAAAAAGGATTTCAGTGAGGGGCAAAAAGTCGATACCCGACTTATCGCTATGGGGATGGACGCCCAGCGGCCATT
GGCACTGAAGCCCGGCAGTCAATAA

Upstream 100 bases:

>100_bases
ACAGCATAGTGGCTGCTGCCCTCAAGCTGGTGCAGGGCTCGGATGCTGGCACAGGCAAGGGCACTGACACAGGCATAGTG
ATTGGACTGGAGGCATCGGC

Downstream 100 bases:

>100_bases
TCACGACCTTGAGAAACACAAAACGGCCCAAGGGCCGTTTTGTATTTTCGACTTCAGACTGGTTCAGTCGAGATCTTGTT
GCACCACCGCCAAATAGCCC

Product: (acyl-carrier-protein) S-malonyltransferase

Products: NA

Alternate protein names: Acyl-Carrier Domain Protein; Malonyl CoA-Acyl Carrier Protein Transacylase; Acyl-Carrier Domain-Containing Protein; (Acyl-Carrier-Protein) S-Malonyltransferase-Like Protein; Acyl-Carrier Protein; Malonyl-CoA-[Acyl-Carrier-Protein] Transacylase

Number of amino acids: Translated: 354; Mature: 354

Protein sequence:

>354_residues
MNTSATKERVLVIAPGRGCYNKEELGYLKRLHGDKVDFIAGIDAFRRHEGQKSIAELDAMDKYSFKLHTPGENASALIYA
CAMADFMDIDRDRFEIVAVTGNSMGWYIALACAGALDEEGAIGVINTMGSMMQDGLIGGQMIYPEMDDNWHPSPVRTQML
DKLLAEAEATEGCALYTSIHLGGFRVLAGNEAGLKLAEERLPKIDERYPMRLYNHGAFHSPLLTEVSAKGKSLLPKSFFK
APNVPLVDGRGAIWTQYSTDTEKLWEYTLGHQVTEPYDFTRAVQVAVKEFAPDRVMILGPGTTLGGAVAQSLIGCHWFGW
QQKKDFSEGQKVDTRLIAMGMDAQRPLALKPGSQ

Sequences:

>Translated_354_residues
MNTSATKERVLVIAPGRGCYNKEELGYLKRLHGDKVDFIAGIDAFRRHEGQKSIAELDAMDKYSFKLHTPGENASALIYA
CAMADFMDIDRDRFEIVAVTGNSMGWYIALACAGALDEEGAIGVINTMGSMMQDGLIGGQMIYPEMDDNWHPSPVRTQML
DKLLAEAEATEGCALYTSIHLGGFRVLAGNEAGLKLAEERLPKIDERYPMRLYNHGAFHSPLLTEVSAKGKSLLPKSFFK
APNVPLVDGRGAIWTQYSTDTEKLWEYTLGHQVTEPYDFTRAVQVAVKEFAPDRVMILGPGTTLGGAVAQSLIGCHWFGW
QQKKDFSEGQKVDTRLIAMGMDAQRPLALKPGSQ
>Mature_354_residues
MNTSATKERVLVIAPGRGCYNKEELGYLKRLHGDKVDFIAGIDAFRRHEGQKSIAELDAMDKYSFKLHTPGENASALIYA
CAMADFMDIDRDRFEIVAVTGNSMGWYIALACAGALDEEGAIGVINTMGSMMQDGLIGGQMIYPEMDDNWHPSPVRTQML
DKLLAEAEATEGCALYTSIHLGGFRVLAGNEAGLKLAEERLPKIDERYPMRLYNHGAFHSPLLTEVSAKGKSLLPKSFFK
APNVPLVDGRGAIWTQYSTDTEKLWEYTLGHQVTEPYDFTRAVQVAVKEFAPDRVMILGPGTTLGGAVAQSLIGCHWFGW
QQKKDFSEGQKVDTRLIAMGMDAQRPLALKPGSQ

Specific function: Unknown

COG id: COG0331

COG function: function code I; (acyl-carrier-protein) S-malonyltransferase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 39016; Mature: 39016

Theoretical pI: Translated: 5.85; Mature: 5.85

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
4.2 %Met     (Translated Protein)
5.6 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
4.2 %Met     (Mature Protein)
5.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNTSATKERVLVIAPGRGCYNKEELGYLKRLHGDKVDFIAGIDAFRRHEGQKSIAELDAM
CCCCCCCCEEEEEECCCCCCCHHHHHHHHHHCCCCCHHHHHHHHHHHCCCHHHHHHHHCC
DKYSFKLHTPGENASALIYACAMADFMDIDRDRFEIVAVTGNSMGWYIALACAGALDEEG
CCCEEEEECCCCCCCHHHHHHHHHHHHHCCCCCEEEEEEECCCCCEEEEEEECCCCCCCC
AIGVINTMGSMMQDGLIGGQMIYPEMDDNWHPSPVRTQMLDKLLAEAEATEGCALYTSIH
CEEHHHHHHHHHHCCCCCCEEECCCCCCCCCCCHHHHHHHHHHHHHHCCCCCEEEEEEEE
LGGFRVLAGNEAGLKLAEERLPKIDERYPMRLYNHGAFHSPLLTEVSAKGKSLLPKSFFK
ECCEEEEECCCCCCHHHHHHCCCCCCCCCHHEECCCCCCCCHHHHHHCCCCCCCCHHHHC
APNVPLVDGRGAIWTQYSTDTEKLWEYTLGHQVTEPYDFTRAVQVAVKEFAPDRVMILGP
CCCCCEECCCCCEEEECCCCHHHHHHHHHCCCCCCCHHHHHHHHHHHHHCCCCEEEEEEC
GTTLGGAVAQSLIGCHWFGWQQKKDFSEGQKVDTRLIAMGMDAQRPLALKPGSQ
CCCHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHEEEEECCCCCCCCCCCCCCC
>Mature Secondary Structure
MNTSATKERVLVIAPGRGCYNKEELGYLKRLHGDKVDFIAGIDAFRRHEGQKSIAELDAM
CCCCCCCCEEEEEECCCCCCCHHHHHHHHHHCCCCCHHHHHHHHHHHCCCHHHHHHHHCC
DKYSFKLHTPGENASALIYACAMADFMDIDRDRFEIVAVTGNSMGWYIALACAGALDEEG
CCCEEEEECCCCCCCHHHHHHHHHHHHHCCCCCEEEEEEECCCCCEEEEEEECCCCCCCC
AIGVINTMGSMMQDGLIGGQMIYPEMDDNWHPSPVRTQMLDKLLAEAEATEGCALYTSIH
CEEHHHHHHHHHHCCCCCCEEECCCCCCCCCCCHHHHHHHHHHHHHHCCCCCEEEEEEEE
LGGFRVLAGNEAGLKLAEERLPKIDERYPMRLYNHGAFHSPLLTEVSAKGKSLLPKSFFK
ECCEEEEECCCCCCHHHHHHCCCCCCCCCHHEECCCCCCCCHHHHHHCCCCCCCCHHHHC
APNVPLVDGRGAIWTQYSTDTEKLWEYTLGHQVTEPYDFTRAVQVAVKEFAPDRVMILGP
CCCCCEECCCCCEEEECCCCHHHHHHHHHCCCCCCCHHHHHHHHHHHHHCCCCEEEEEEC
GTTLGGAVAQSLIGCHWFGWQQKKDFSEGQKVDTRLIAMGMDAQRPLALKPGSQ
CCCHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHEEEEECCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA