| Definition | Shewanella amazonensis SB2B chromosome, complete genome. |
|---|---|
| Accession | NC_008700 |
| Length | 4,306,142 |
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The map label for this gene is gltT [H]
Identifier: 119775900
GI number: 119775900
Start: 3308509
End: 3309801
Strand: Reverse
Name: gltT [H]
Synonym: Sama_2768
Alternate gene names: 119775900
Gene position: 3309801-3308509 (Counterclockwise)
Preceding gene: 119775901
Following gene: 119775898
Centisome position: 76.86
GC content: 56.69
Gene sequence:
>1293_bases ATGTCTGCTACTCCACCCGCTAATTTGTGGCGCCGCTGGTGCGCCGTGCCCCTTTGGCTGCAAATCCTCACCGGTATGTT GCTCGGTATTGGGGTTGGCCTTGTCCTTGGACCCGATGCCAGTGCCCTGAAACCCATAGGCACCCTGTTTGTAAACACCA TCAAGATGTTGATAGTGCCCTTGGTATTTTGCTCGCTGATTGTGGGTGTTACCTCGATGCAGGATACCGCCCGCATGGGG CGCATCGGTTTTAAGTCCTTCGCCTTTTATCTGGCCACGACCGCCATAGCCATCTCGGTGGGCCTTATGGTGGGTTGGCT GCTTGAGCCTGGCGCGGGGCTGAGTCTCGAAGGCCATGACCTCAGTGCCGAAGTGAAAACGGCGCCGTCGGTGATGGACA CCCTTATCAACATAGTGCCCACCAATCCGGTGGCGGCCCTGGCCAGTGGCCAGATTTTACAGGTGATTGTATTCGCCGTG GCCCTGGGGGTGGCGCTGGTGCTGATTGGTGACCATGGTAAGCCGGCCATCAAGGTGTTTGAGAGCCTTGCCGAAGCCAT GTATAAACTCACCGACATGGTGATGAAGCTTGCCCCCTATGGCGTATTTGGTCTGATGGCCTGGGTCGCAGGCGAGTACG GCATTGATATGTTGCTGCCGCTGATTAAGGTGATTATTGCCGTGTATCTGGGCTGTGCCCTGCATATTCTGGGCTTTTAT TCGTTGGTGCTTAAACTGGTGGCCGGGCTAAGTCCCATTCAGTTTTTTAAAGGCATCAGCAACGCCATGGCCGTGGCTTT TACCACCTCCAGCAGCGCAGGCACCCTGCCTGCCAGCATGAAGTGCGCCAGCGAGTATCTTGGCGTAAACAAGAAGATTT CCAGCTTTGTGCTGCCCCTTGGCACCACCATCAATATGGACGGCACGGCCCTGTATCAGGGGGTGACGGCGCTTTTTGTG GCGCAGGCCTTTGGGGTGGACTTAACCTGGGTTGATTACCTCACCATAGTACTGACCGCCACCCTGGCATCCATTGGTAC CGCAGGGGTGCCGGGAGCTGGACTTGTGATGCTGACACTGGTGCTGACCACGGTGGGCTTGCCCCTTGAAGGCGTGGCCA TTATTGCCGGTATTGACCGGATACTGGACATGGCCCGCACTGTGGTGAATGTGTCCGGTGACCTGGTGGCCACCACTGTG ATTGCCCGCTCGGAGGGGGAAATTGATATTGCCCATTATAATGCCGACATGGAAACCAGTTCCGAGATGGCGCAGGCACG GGAAGACAGCTGA
Upstream 100 bases:
>100_bases TGCCACAGCAAATGTTAATATTCGCGCTCGGCTATCTCATGCCGAGCGCGCCGGGAAGGATACTTAGCGTGCCCCTTTGG CAAGTCTCATAAGGTTCAGA
Downstream 100 bases:
>100_bases TTGCCTGAACTGAGTTGATAAATGAAAAAAGCCCCGTTTAATTGGGGCTTTTTTCTGATCTCGGATACGTGAGTTCGGAT GCGTGAGTTCGGATACGTGA
Product: proton/glutamate symporter
Products: L-aspartate [Cytoplasm]; Proton [Cytoplasm]; L-glutamate [Cytoplasm] [C]
Alternate protein names: Glutamate-aspartate carrier protein [H]
Number of amino acids: Translated: 430; Mature: 429
Protein sequence:
>430_residues MSATPPANLWRRWCAVPLWLQILTGMLLGIGVGLVLGPDASALKPIGTLFVNTIKMLIVPLVFCSLIVGVTSMQDTARMG RIGFKSFAFYLATTAIAISVGLMVGWLLEPGAGLSLEGHDLSAEVKTAPSVMDTLINIVPTNPVAALASGQILQVIVFAV ALGVALVLIGDHGKPAIKVFESLAEAMYKLTDMVMKLAPYGVFGLMAWVAGEYGIDMLLPLIKVIIAVYLGCALHILGFY SLVLKLVAGLSPIQFFKGISNAMAVAFTTSSSAGTLPASMKCASEYLGVNKKISSFVLPLGTTINMDGTALYQGVTALFV AQAFGVDLTWVDYLTIVLTATLASIGTAGVPGAGLVMLTLVLTTVGLPLEGVAIIAGIDRILDMARTVVNVSGDLVATTV IARSEGEIDIAHYNADMETSSEMAQAREDS
Sequences:
>Translated_430_residues MSATPPANLWRRWCAVPLWLQILTGMLLGIGVGLVLGPDASALKPIGTLFVNTIKMLIVPLVFCSLIVGVTSMQDTARMG RIGFKSFAFYLATTAIAISVGLMVGWLLEPGAGLSLEGHDLSAEVKTAPSVMDTLINIVPTNPVAALASGQILQVIVFAV ALGVALVLIGDHGKPAIKVFESLAEAMYKLTDMVMKLAPYGVFGLMAWVAGEYGIDMLLPLIKVIIAVYLGCALHILGFY SLVLKLVAGLSPIQFFKGISNAMAVAFTTSSSAGTLPASMKCASEYLGVNKKISSFVLPLGTTINMDGTALYQGVTALFV AQAFGVDLTWVDYLTIVLTATLASIGTAGVPGAGLVMLTLVLTTVGLPLEGVAIIAGIDRILDMARTVVNVSGDLVATTV IARSEGEIDIAHYNADMETSSEMAQAREDS >Mature_429_residues SATPPANLWRRWCAVPLWLQILTGMLLGIGVGLVLGPDASALKPIGTLFVNTIKMLIVPLVFCSLIVGVTSMQDTARMGR IGFKSFAFYLATTAIAISVGLMVGWLLEPGAGLSLEGHDLSAEVKTAPSVMDTLINIVPTNPVAALASGQILQVIVFAVA LGVALVLIGDHGKPAIKVFESLAEAMYKLTDMVMKLAPYGVFGLMAWVAGEYGIDMLLPLIKVIIAVYLGCALHILGFYS LVLKLVAGLSPIQFFKGISNAMAVAFTTSSSAGTLPASMKCASEYLGVNKKISSFVLPLGTTINMDGTALYQGVTALFVA QAFGVDLTWVDYLTIVLTATLASIGTAGVPGAGLVMLTLVLTTVGLPLEGVAIIAGIDRILDMARTVVNVSGDLVATTVI ARSEGEIDIAHYNADMETSSEMAQAREDS
Specific function: This carrier protein is part of the Na(+)-dependent, binding-protein-independent glutamate-aspartate transport system [H]
COG id: COG1301
COG function: function code C; Na+/H+-dicarboxylate symporters
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the sodium:dicarboxylate (SDF) symporter (TC 2.A.23) family [H]
Homologues:
Organism=Homo sapiens, GI21314632, Length=418, Percent_Identity=33.0143540669856, Blast_Score=194, Evalue=2e-49, Organism=Homo sapiens, GI40254478, Length=448, Percent_Identity=31.6964285714286, Blast_Score=193, Evalue=3e-49, Organism=Homo sapiens, GI5032093, Length=403, Percent_Identity=37.468982630273, Blast_Score=188, Evalue=1e-47, Organism=Homo sapiens, GI169790839, Length=470, Percent_Identity=29.7872340425532, Blast_Score=184, Evalue=1e-46, Organism=Homo sapiens, GI66773030, Length=413, Percent_Identity=31.7191283292978, Blast_Score=181, Evalue=1e-45, Organism=Homo sapiens, GI4827012, Length=321, Percent_Identity=36.4485981308411, Blast_Score=174, Evalue=2e-43, Organism=Homo sapiens, GI223468566, Length=255, Percent_Identity=41.5686274509804, Blast_Score=170, Evalue=2e-42, Organism=Homo sapiens, GI223468564, Length=246, Percent_Identity=41.869918699187, Blast_Score=169, Evalue=4e-42, Organism=Homo sapiens, GI194239697, Length=257, Percent_Identity=38.1322957198444, Blast_Score=166, Evalue=3e-41, Organism=Homo sapiens, GI301601644, Length=199, Percent_Identity=37.6884422110553, Blast_Score=130, Evalue=2e-30, Organism=Homo sapiens, GI262359914, Length=377, Percent_Identity=27.3209549071618, Blast_Score=124, Evalue=1e-28, Organism=Escherichia coli, GI1790514, Length=411, Percent_Identity=39.1727493917275, Blast_Score=263, Evalue=2e-71, Organism=Escherichia coli, GI1789947, Length=410, Percent_Identity=34.8780487804878, Blast_Score=238, Evalue=4e-64, Organism=Escherichia coli, GI1788024, Length=426, Percent_Identity=29.3427230046948, Blast_Score=150, Evalue=1e-37, Organism=Escherichia coli, GI1789473, Length=378, Percent_Identity=25.6613756613757, Blast_Score=90, Evalue=2e-19, Organism=Caenorhabditis elegans, GI71996953, Length=460, Percent_Identity=34.7826086956522, Blast_Score=226, Evalue=1e-59, Organism=Caenorhabditis elegans, GI71983106, Length=434, Percent_Identity=33.8709677419355, Blast_Score=207, Evalue=1e-53, Organism=Caenorhabditis elegans, GI71983099, Length=434, Percent_Identity=33.8709677419355, Blast_Score=206, Evalue=2e-53, Organism=Caenorhabditis elegans, GI193206505, Length=416, Percent_Identity=32.2115384615385, Blast_Score=190, Evalue=1e-48, Organism=Caenorhabditis elegans, GI17537407, Length=457, Percent_Identity=30.6345733041575, Blast_Score=189, Evalue=2e-48, Organism=Caenorhabditis elegans, GI193206654, Length=452, Percent_Identity=29.646017699115, Blast_Score=180, Evalue=2e-45, Organism=Caenorhabditis elegans, GI17541374, Length=394, Percent_Identity=30.9644670050761, Blast_Score=162, Evalue=4e-40, Organism=Drosophila melanogaster, GI24583025, Length=394, Percent_Identity=30.9644670050761, Blast_Score=170, Evalue=2e-42, Organism=Drosophila melanogaster, GI17137668, Length=394, Percent_Identity=30.9644670050761, Blast_Score=170, Evalue=2e-42, Organism=Drosophila melanogaster, GI24583023, Length=394, Percent_Identity=30.9644670050761, Blast_Score=170, Evalue=2e-42, Organism=Drosophila melanogaster, GI281360483, Length=466, Percent_Identity=30.0429184549356, Blast_Score=141, Evalue=8e-34, Organism=Drosophila melanogaster, GI17137666, Length=466, Percent_Identity=30.0429184549356, Blast_Score=141, Evalue=8e-34, Organism=Drosophila melanogaster, GI281360481, Length=466, Percent_Identity=30.0429184549356, Blast_Score=141, Evalue=9e-34,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001991 - InterPro: IPR018107 [H]
Pfam domain/function: PF00375 SDF [H]
EC number: NA
Molecular weight: Translated: 45001; Mature: 44870
Theoretical pI: Translated: 4.93; Mature: 4.93
Prosite motif: PS00714 NA_DICARBOXYL_SYMP_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 4.4 %Met (Translated Protein) 5.3 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 4.2 %Met (Mature Protein) 5.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSATPPANLWRRWCAVPLWLQILTGMLLGIGVGLVLGPDASALKPIGTLFVNTIKMLIVP CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCHHEEECCCHHHHHHHHHHHHHHHHHHHHH LVFCSLIVGVTSMQDTARMGRIGFKSFAFYLATTAIAISVGLMVGWLLEPGAGLSLEGHD HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCC LSAEVKTAPSVMDTLINIVPTNPVAALASGQILQVIVFAVALGVALVLIGDHGKPAIKVF CCCHHHHHHHHHHHHHHHCCCCHHHHHHCCHHHHHHHHHHHHHHHHEEECCCCCHHHHHH ESLAEAMYKLTDMVMKLAPYGVFGLMAWVAGEYGIDMLLPLIKVIIAVYLGCALHILGFY HHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHH SLVLKLVAGLSPIQFFKGISNAMAVAFTTSSSAGTLPASMKCASEYLGVNKKISSFVLPL HHHHHHHHCCCHHHHHHHHHHHEEEEEEECCCCCCCCHHHHHHHHHHCCCHHHHHHHHCC GTTINMDGTALYQGVTALFVAQAFGVDLTWVDYLTIVLTATLASIGTAGVPGAGLVMLTL CCEECCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHH VLTTVGLPLEGVAIIAGIDRILDMARTVVNVSGDLVATTVIARSEGEIDIAHYNADMETS HHHHHCCCCCHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHEECCCCCEEEEEECCCCCHH SEMAQAREDS HHHHHHCCCC >Mature Secondary Structure SATPPANLWRRWCAVPLWLQILTGMLLGIGVGLVLGPDASALKPIGTLFVNTIKMLIVP CCCCCHHHHHHHHHHHHHHHHHHHHHHHHCHHEEECCCHHHHHHHHHHHHHHHHHHHHH LVFCSLIVGVTSMQDTARMGRIGFKSFAFYLATTAIAISVGLMVGWLLEPGAGLSLEGHD HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCC LSAEVKTAPSVMDTLINIVPTNPVAALASGQILQVIVFAVALGVALVLIGDHGKPAIKVF CCCHHHHHHHHHHHHHHHCCCCHHHHHHCCHHHHHHHHHHHHHHHHEEECCCCCHHHHHH ESLAEAMYKLTDMVMKLAPYGVFGLMAWVAGEYGIDMLLPLIKVIIAVYLGCALHILGFY HHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHH SLVLKLVAGLSPIQFFKGISNAMAVAFTTSSSAGTLPASMKCASEYLGVNKKISSFVLPL HHHHHHHHCCCHHHHHHHHHHHEEEEEEECCCCCCCCHHHHHHHHHHCCCHHHHHHHHCC GTTINMDGTALYQGVTALFVAQAFGVDLTWVDYLTIVLTATLASIGTAGVPGAGLVMLTL CCEECCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHH VLTTVGLPLEGVAIIAGIDRILDMARTVVNVSGDLVATTVIARSEGEIDIAHYNADMETS HHHHHCCCCCHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHEECCCCCEEEEEECCCCCHH SEMAQAREDS HHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: L-aspartate [Periplasm]; Proton [Periplasm]; L-glutamate [Periplasm] [C]
Specific reaction: Proton [Periplasm] + L-aspartate [Periplasm] = Proton [Cytoplasm] + L-aspartate [Cytoplasm] Proton [Periplasm] + L-glutamate [Periplasm] = Proton [Cytoplasm] + L-glutamate [Cytoplasm] [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 9579061; 9384377 [H]