| Definition | Shewanella amazonensis SB2B chromosome, complete genome. |
|---|---|
| Accession | NC_008700 |
| Length | 4,306,142 |
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The map label for this gene is fba [H]
Identifier: 119775888
GI number: 119775888
Start: 3295251
End: 3296318
Strand: Reverse
Name: fba [H]
Synonym: Sama_2756
Alternate gene names: 119775888
Gene position: 3296318-3295251 (Counterclockwise)
Preceding gene: 119775889
Following gene: 119775887
Centisome position: 76.55
GC content: 57.87
Gene sequence:
>1068_bases ATGGCCCTTATTTCCCTACGTCAACTGCTGGACCACGCTGCAGAGCATGGTTACGGTGTGCCTGCGTTCAACGTGAACAA CCTTGAGCAGATGCGCGCCATCATGCAGGCGGCCGAAGCCACCGACAGCCCTGTGATTGTTCAGGCCTCTGCCGGTGCCC GCAAGTACGCCCGTCCTCAGTTCCTCAAGTATCTGATGAACGCCGCCCTCGAGCAGTATCCTGATATCCCTGTGTGTATT CACCAGGACCACGGCACCCACCCCGACGTGTGCCAGCGTTCTATCCAGCTGGGTATGAGCTCAGTGATGATGGACGGCTC TTTGATGTCCGACGGTAAAACCCCGGCTTCTTACGATTACAACGTCGACGTGACCCGCAAGACTGTGGCATTCGCCCACG CCTGTGGTGTGTCTGTTGAAGGTGAAATCGGCTGTCTGGGTAGCCTGGAAACCGGTACTGCCGGTGAAGAAGATGGTATC GGCGCCGTTGGCGTGCTGAGCCACGACCAGCTGCTGACCACCGCCGAAGAAGCCGCGCGCTTTGTGGCCGACACCCACGT GGATGCCCTGGCCATCGCTATCGGTACCAGCCACGGCGCCTACAAGTTCAGCCGCAAGCCTACCGGTGACGTGCTGCGTA TTGACCGCATCAAAGAAATCCATGCCCGTATCCCCAACACCCACCTGGTAATGCACGGCTCTTCTTCTGTGCCCCAGTAC TGGCTGGAAATCATCAACCAATACGGTGGTGAAATCCCTGAGACCTACGGCGTGCCGCTGGAAGAAATCGTTGAAGGCAT CAAGCACGGCGTGCGTAAGGTGAACATCGACACCGACCTGCGTCTGGCCTCCACTGGCGCGGTACGTAAGTTCCTGGCCG AGAACCCAAGTGAGTTCGACCCACGTAAGTTCCTCAAGGCCTCCATGGAAGCCATGGCCGATATCTGTACCGAGCGCTAC GAAGCCTTTGGCTGTGCCGGTATGGCATCGAAAATCAAGCCGCTGTCACTGCAGGCTATGTACAAGCGTTATCAGACCGG CGAGCTGGATCCCAAGATCAACCTCTAA
Upstream 100 bases:
>100_bases CGCCTCCCGGGAGACCGGGAGGCATAAAAATCAGTCCAAACGATAGCGACCTCGGTGACCCACATTCAGCATGGATGTCA CCCTATTAATGGAGTAAAAA
Downstream 100 bases:
>100_bases TCTCTCTGAACTGAAAAAGCCCGCCATTGCGGGCTTTTTATTTACCTGGCGTCTGCAAGCGGGTAAATGTGCGCTTTTGC TTATGCTTGCCGGACAAACG
Product: fructose-1,6-bisphosphate aldolase
Products: NA
Alternate protein names: FBP aldolase; FBPA; Fructose-1,6-bisphosphate aldolase [H]
Number of amino acids: Translated: 355; Mature: 354
Protein sequence:
>355_residues MALISLRQLLDHAAEHGYGVPAFNVNNLEQMRAIMQAAEATDSPVIVQASAGARKYARPQFLKYLMNAALEQYPDIPVCI HQDHGTHPDVCQRSIQLGMSSVMMDGSLMSDGKTPASYDYNVDVTRKTVAFAHACGVSVEGEIGCLGSLETGTAGEEDGI GAVGVLSHDQLLTTAEEAARFVADTHVDALAIAIGTSHGAYKFSRKPTGDVLRIDRIKEIHARIPNTHLVMHGSSSVPQY WLEIINQYGGEIPETYGVPLEEIVEGIKHGVRKVNIDTDLRLASTGAVRKFLAENPSEFDPRKFLKASMEAMADICTERY EAFGCAGMASKIKPLSLQAMYKRYQTGELDPKINL
Sequences:
>Translated_355_residues MALISLRQLLDHAAEHGYGVPAFNVNNLEQMRAIMQAAEATDSPVIVQASAGARKYARPQFLKYLMNAALEQYPDIPVCI HQDHGTHPDVCQRSIQLGMSSVMMDGSLMSDGKTPASYDYNVDVTRKTVAFAHACGVSVEGEIGCLGSLETGTAGEEDGI GAVGVLSHDQLLTTAEEAARFVADTHVDALAIAIGTSHGAYKFSRKPTGDVLRIDRIKEIHARIPNTHLVMHGSSSVPQY WLEIINQYGGEIPETYGVPLEEIVEGIKHGVRKVNIDTDLRLASTGAVRKFLAENPSEFDPRKFLKASMEAMADICTERY EAFGCAGMASKIKPLSLQAMYKRYQTGELDPKINL >Mature_354_residues ALISLRQLLDHAAEHGYGVPAFNVNNLEQMRAIMQAAEATDSPVIVQASAGARKYARPQFLKYLMNAALEQYPDIPVCIH QDHGTHPDVCQRSIQLGMSSVMMDGSLMSDGKTPASYDYNVDVTRKTVAFAHACGVSVEGEIGCLGSLETGTAGEEDGIG AVGVLSHDQLLTTAEEAARFVADTHVDALAIAIGTSHGAYKFSRKPTGDVLRIDRIKEIHARIPNTHLVMHGSSSVPQYW LEIINQYGGEIPETYGVPLEEIVEGIKHGVRKVNIDTDLRLASTGAVRKFLAENPSEFDPRKFLKASMEAMADICTERYE AFGCAGMASKIKPLSLQAMYKRYQTGELDPKINL
Specific function: Catalyzes the aldol condensation of dihydroxyacetone phosphate (DHAP or glycerone-phosphate) with glyceraldehyde 3- phosphate (G3P) to form fructose 1,6-bisphosphate (FBP) in gluconeogenesis and the reverse reaction in glycolysis [H]
COG id: COG0191
COG function: function code G; Fructose/tagatose bisphosphate aldolase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the class II fructose-bisphosphate aldolase family [H]
Homologues:
Organism=Escherichia coli, GI1789526, Length=330, Percent_Identity=33.6363636363636, Blast_Score=168, Evalue=6e-43, Organism=Escherichia coli, GI87082041, Length=329, Percent_Identity=32.8267477203647, Blast_Score=164, Evalue=6e-42, Organism=Escherichia coli, GI1788072, Length=330, Percent_Identity=27.5757575757576, Blast_Score=103, Evalue=3e-23,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR013785 - InterPro: IPR006412 - InterPro: IPR000771 [H]
Pfam domain/function: PF01116 F_bP_aldolase [H]
EC number: =4.1.2.13 [H]
Molecular weight: Translated: 38666; Mature: 38534
Theoretical pI: Translated: 5.89; Mature: 5.89
Prosite motif: PS00602 ALDOLASE_CLASS_II_1 ; PS00806 ALDOLASE_CLASS_II_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.7 %Cys (Translated Protein) 3.7 %Met (Translated Protein) 5.4 %Cys+Met (Translated Protein) 1.7 %Cys (Mature Protein) 3.4 %Met (Mature Protein) 5.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MALISLRQLLDHAAEHGYGVPAFNVNNLEQMRAIMQAAEATDSPVIVQASAGARKYARPQ CHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHCCCCCEEEEECCCCHHHCCHH FLKYLMNAALEQYPDIPVCIHQDHGTHPDVCQRSIQLGMSSVMMDGSLMSDGKTPASYDY HHHHHHHHHHHHCCCCCEEEECCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCC NVDVTRKTVAFAHACGVSVEGEIGCLGSLETGTAGEEDGIGAVGVLSHDQLLTTAEEAAR CCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEECCCHHHHHHHHHHHH FVADTHVDALAIAIGTSHGAYKFSRKPTGDVLRIDRIKEIHARIPNTHLVMHGSSSVPQY HHHHHCHHEEEEEEECCCCCEEECCCCCCCHHHHHHHHHHHHHCCCCEEEEECCCCCHHH WLEIINQYGGEIPETYGVPLEEIVEGIKHGVRKVNIDTDLRLASTGAVRKFLAENPSEFD HHHHHHHHCCCCCCCCCCCHHHHHHHHHHCCEEECCCCCCEEHHHHHHHHHHHCCCCCCC PRKFLKASMEAMADICTERYEAFGCAGMASKIKPLSLQAMYKRYQTGELDPKINL HHHHHHHHHHHHHHHHHHHHHHHHHCCHHHCCCCHHHHHHHHHHCCCCCCCCCCC >Mature Secondary Structure ALISLRQLLDHAAEHGYGVPAFNVNNLEQMRAIMQAAEATDSPVIVQASAGARKYARPQ HHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHCCCCCEEEEECCCCHHHCCHH FLKYLMNAALEQYPDIPVCIHQDHGTHPDVCQRSIQLGMSSVMMDGSLMSDGKTPASYDY HHHHHHHHHHHHCCCCCEEEECCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCC NVDVTRKTVAFAHACGVSVEGEIGCLGSLETGTAGEEDGIGAVGVLSHDQLLTTAEEAAR CCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEECCCHHHHHHHHHHHH FVADTHVDALAIAIGTSHGAYKFSRKPTGDVLRIDRIKEIHARIPNTHLVMHGSSSVPQY HHHHHCHHEEEEEEECCCCCEEECCCCCCCHHHHHHHHHHHHHCCCCEEEEECCCCCHHH WLEIINQYGGEIPETYGVPLEEIVEGIKHGVRKVNIDTDLRLASTGAVRKFLAENPSEFD HHHHHHHHCCCCCCCCCCCHHHHHHHHHHCCEEECCCCCCEEHHHHHHHHHHHCCCCCCC PRKFLKASMEAMADICTERYEAFGCAGMASKIKPLSLQAMYKRYQTGELDPKINL HHHHHHHHHHHHHHHHHHHHHHHHHCCHHHCCCCHHHHHHHHHHCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 10984043 [H]