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The map label for this gene is ydiY [H]

Identifier: 119775886

GI number: 119775886

Start: 3292754

End: 3293497

Strand: Reverse

Name: ydiY [H]

Synonym: Sama_2754

Alternate gene names: 119775886

Gene position: 3293497-3292754 (Counterclockwise)

Preceding gene: 119775887

Following gene: 119775885

Centisome position: 76.48

GC content: 52.96

Gene sequence:

>744_bases
ATGATGAACAAACTGCTGATTGCCGCAGCCCTGACGGCGGCGACACCTTTTGCCGCCATGGCCGGTGCTGACTTCGTGGA
AGGCGACAAGACCTTTGCCGGTGAAGCCGAACTGGGTGCCACTCTGACCACAGGCAACACAGACACCACGTCACTCAAGG
GCCGTCTCGGGCTCAAGCATGAACTGGGTAACTGGGAAAACGAGTACACACTGGAAGCGCTCTACAAGGAAGACACTGAC
GAAGTGACGGCCGAGCGTTACTTTGCCGGTGCCCAGGGTAACTATAAGTTTGACGATAACAACTACCTGTTTGCCAACGC
CAACTATGAGCAGGACCCTTTTACCGGTTATGACTATAAGCTCACCGGCGCCGTGGGTTATGGTCATCGCTTTATCGACA
CTGAAAGTACCACTCTGGCCATGGAAGTGGGTCCCGGTTACCAGTATCGCCGCTTGGATGACGAACAGAGTGCTCTGCTG
GGTTACAGCTCCGAAGACAGCGTGGTGGCCCACGGTGTGCTGAACTTTGAAACCAAGATCAGTGACTCTTCCAAGTTCAA
GCAACTTATCGTTGCCGACTATGGCGACCAGCTGGAAGCACGCTCTGAAACCTCGCTGACGGCCAATATTGTTGGTGCAC
TGGCGATGAAGTTCGCTGTGATTGTGCGTTACAACAGTGAGCCACTGGATGGTAAAAAGAGCACAGACACAGAAACCAAT
ATGACACTGCTGTATTCTTTCTAA

Upstream 100 bases:

>100_bases
GTCAAATGCCGGATTTTGTGGTGTATTTCGCATTTTCGGCCTCAGGTGGTACCATGTGCGGCGATTTTTGGGAGCGAAAA
CACCTGATAAGGATAAGAGA

Downstream 100 bases:

>100_bases
AATTCAGCCGTTCAGAAAAAAGCGCCCATTGGGCGCTTTTTTTATTACCACCTTGTAGGTAAATGTAAAAAAATAATGAA
TTTTTACGTGATTCAGATAA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 247; Mature: 247

Protein sequence:

>247_residues
MMNKLLIAAALTAATPFAAMAGADFVEGDKTFAGEAELGATLTTGNTDTTSLKGRLGLKHELGNWENEYTLEALYKEDTD
EVTAERYFAGAQGNYKFDDNNYLFANANYEQDPFTGYDYKLTGAVGYGHRFIDTESTTLAMEVGPGYQYRRLDDEQSALL
GYSSEDSVVAHGVLNFETKISDSSKFKQLIVADYGDQLEARSETSLTANIVGALAMKFAVIVRYNSEPLDGKKSTDTETN
MTLLYSF

Sequences:

>Translated_247_residues
MMNKLLIAAALTAATPFAAMAGADFVEGDKTFAGEAELGATLTTGNTDTTSLKGRLGLKHELGNWENEYTLEALYKEDTD
EVTAERYFAGAQGNYKFDDNNYLFANANYEQDPFTGYDYKLTGAVGYGHRFIDTESTTLAMEVGPGYQYRRLDDEQSALL
GYSSEDSVVAHGVLNFETKISDSSKFKQLIVADYGDQLEARSETSLTANIVGALAMKFAVIVRYNSEPLDGKKSTDTETN
MTLLYSF
>Mature_247_residues
MMNKLLIAAALTAATPFAAMAGADFVEGDKTFAGEAELGATLTTGNTDTTSLKGRLGLKHELGNWENEYTLEALYKEDTD
EVTAERYFAGAQGNYKFDDNNYLFANANYEQDPFTGYDYKLTGAVGYGHRFIDTESTTLAMEVGPGYQYRRLDDEQSALL
GYSSEDSVVAHGVLNFETKISDSSKFKQLIVADYGDQLEARSETSLTANIVGALAMKFAVIVRYNSEPLDGKKSTDTETN
MTLLYSF

Specific function: Unknown

COG id: COG3137

COG function: function code M; Putative salt-induced outer membrane protein

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI1788016, Length=231, Percent_Identity=27.2727272727273, Blast_Score=80, Evalue=2e-16,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR007433 [H]

Pfam domain/function: PF04338 DUF481 [H]

EC number: NA

Molecular weight: Translated: 27103; Mature: 27103

Theoretical pI: Translated: 4.20; Mature: 4.20

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
2.4 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
2.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MMNKLLIAAALTAATPFAAMAGADFVEGDKTFAGEAELGATLTTGNTDTTSLKGRLGLKH
CCCHHHHHHHHHHCCCHHHHCCCCEECCCCCCCCCCCCCEEEECCCCCCCEEECCCCCEE
ELGNWENEYTLEALYKEDTDEVTAERYFAGAQGNYKFDDNNYLFANANYEQDPFTGYDYK
CCCCCCCCEEEEEEECCCCHHHHHHHHEECCCCCEEECCCCEEEEECCCCCCCCCCCCEE
LTGAVGYGHRFIDTESTTLAMEVGPGYQYRRLDDEQSALLGYSSEDSVVAHGVLNFETKI
EEEEEECCEEEECCCCEEEEEEECCCCEEEECCCCHHHHCCCCCCCCEEEEEEEEEEEEC
SDSSKFKQLIVADYGDQLEARSETSLTANIVGALAMKFAVIVRYNSEPLDGKKSTDTETN
CCCHHHHEEEEECCCCCCCCCCCCCHHHHHHHHHHHEEEEEEEECCCCCCCCCCCCCCCC
MTLLYSF
EEEEEEC
>Mature Secondary Structure
MMNKLLIAAALTAATPFAAMAGADFVEGDKTFAGEAELGATLTTGNTDTTSLKGRLGLKH
CCCHHHHHHHHHHCCCHHHHCCCCEECCCCCCCCCCCCCEEEECCCCCCCEEECCCCCEE
ELGNWENEYTLEALYKEDTDEVTAERYFAGAQGNYKFDDNNYLFANANYEQDPFTGYDYK
CCCCCCCCEEEEEEECCCCHHHHHHHHEECCCCCEEECCCCEEEEECCCCCCCCCCCCEE
LTGAVGYGHRFIDTESTTLAMEVGPGYQYRRLDDEQSALLGYSSEDSVVAHGVLNFETKI
EEEEEECCEEEECCCCEEEEEEECCCCEEEECCCCHHHHCCCCCCCCEEEEEEEEEEEEC
SDSSKFKQLIVADYGDQLEARSETSLTANIVGALAMKFAVIVRYNSEPLDGKKSTDTETN
CCCHHHHEEEEECCCCCCCCCCCCCHHHHHHHHHHHEEEEEEEECCCCCCCCCCCCCCCC
MTLLYSF
EEEEEEC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9278503 [H]