| Definition | Shewanella amazonensis SB2B chromosome, complete genome. |
|---|---|
| Accession | NC_008700 |
| Length | 4,306,142 |
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The map label for this gene is 119775823
Identifier: 119775823
GI number: 119775823
Start: 3219639
End: 3219923
Strand: Reverse
Name: 119775823
Synonym: Sama_2691
Alternate gene names: NA
Gene position: 3219923-3219639 (Counterclockwise)
Preceding gene: 119775834
Following gene: 119775821
Centisome position: 74.78
GC content: 54.74
Gene sequence:
>285_bases GTGAGGCCCAAGACTCGCTGTTGTGTCGATGCAGACACGTGTATACGAAAGGTTGTTAAAGAGAGGGTTTCGCGAAAGCC TTGGCTCAGTATCTTTGGCTCAGGACCAAATGGATCAGAACTAAATGGCGCAGAACCCAATGGCGAATGCCCCAAAGCGC GACTGCCGATGCTGGCGGCCATGTACCTTGGCGATGACAGGTTCAGGCCGTTTTACGATCGCTTTGGCGAAGGCACGGCA GCACTGATGCACGATGGTCTGTTGGCCTATGCCGCCAGCGATTGA
Upstream 100 bases:
>100_bases ACGCTGTAACGCCTGACTGCGGTGCTTTTTCTGCACGCATTTGAAAGAGCTCAAACAAATTTGCCTGAAATGGTAAAACT TTCCTTGTGTCTCACGTTAC
Downstream 100 bases:
>100_bases GGTCTTATGACTTTCCAGTAAAAAAACCGGCGTGATGCCGGTTTTTTATTTACTAATCAATATGCTCATATTCACGGCAG ATAAGTTGGGTATCCGCCTC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 94; Mature: 94
Protein sequence:
>94_residues MRPKTRCCVDADTCIRKVVKERVSRKPWLSIFGSGPNGSELNGAEPNGECPKARLPMLAAMYLGDDRFRPFYDRFGEGTA ALMHDGLLAYAASD
Sequences:
>Translated_94_residues MRPKTRCCVDADTCIRKVVKERVSRKPWLSIFGSGPNGSELNGAEPNGECPKARLPMLAAMYLGDDRFRPFYDRFGEGTA ALMHDGLLAYAASD >Mature_94_residues MRPKTRCCVDADTCIRKVVKERVSRKPWLSIFGSGPNGSELNGAEPNGECPKARLPMLAAMYLGDDRFRPFYDRFGEGTA ALMHDGLLAYAASD
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 10368; Mature: 10368
Theoretical pI: Translated: 8.33; Mature: 8.33
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
4.3 %Cys (Translated Protein) 4.3 %Met (Translated Protein) 8.5 %Cys+Met (Translated Protein) 4.3 %Cys (Mature Protein) 4.3 %Met (Mature Protein) 8.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRPKTRCCVDADTCIRKVVKERVSRKPWLSIFGSGPNGSELNGAEPNGECPKARLPMLAA CCCCCCCEECHHHHHHHHHHHHHCCCCCEEEEECCCCCCCCCCCCCCCCCCCCHHHHHHH MYLGDDRFRPFYDRFGEGTAALMHDGLLAYAASD HHHCCCCCCHHHHHHCCCHHHHHHCCCCEEECCC >Mature Secondary Structure MRPKTRCCVDADTCIRKVVKERVSRKPWLSIFGSGPNGSELNGAEPNGECPKARLPMLAA CCCCCCCEECHHHHHHHHHHHHHCCCCCEEEEECCCCCCCCCCCCCCCCCCCCHHHHHHH MYLGDDRFRPFYDRFGEGTAALMHDGLLAYAASD HHHCCCCCCHHHHHHCCCHHHHHHCCCCEEECCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA