Definition Shewanella amazonensis SB2B chromosome, complete genome.
Accession NC_008700
Length 4,306,142

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The map label for this gene is 119775823

Identifier: 119775823

GI number: 119775823

Start: 3219639

End: 3219923

Strand: Reverse

Name: 119775823

Synonym: Sama_2691

Alternate gene names: NA

Gene position: 3219923-3219639 (Counterclockwise)

Preceding gene: 119775834

Following gene: 119775821

Centisome position: 74.78

GC content: 54.74

Gene sequence:

>285_bases
GTGAGGCCCAAGACTCGCTGTTGTGTCGATGCAGACACGTGTATACGAAAGGTTGTTAAAGAGAGGGTTTCGCGAAAGCC
TTGGCTCAGTATCTTTGGCTCAGGACCAAATGGATCAGAACTAAATGGCGCAGAACCCAATGGCGAATGCCCCAAAGCGC
GACTGCCGATGCTGGCGGCCATGTACCTTGGCGATGACAGGTTCAGGCCGTTTTACGATCGCTTTGGCGAAGGCACGGCA
GCACTGATGCACGATGGTCTGTTGGCCTATGCCGCCAGCGATTGA

Upstream 100 bases:

>100_bases
ACGCTGTAACGCCTGACTGCGGTGCTTTTTCTGCACGCATTTGAAAGAGCTCAAACAAATTTGCCTGAAATGGTAAAACT
TTCCTTGTGTCTCACGTTAC

Downstream 100 bases:

>100_bases
GGTCTTATGACTTTCCAGTAAAAAAACCGGCGTGATGCCGGTTTTTTATTTACTAATCAATATGCTCATATTCACGGCAG
ATAAGTTGGGTATCCGCCTC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 94; Mature: 94

Protein sequence:

>94_residues
MRPKTRCCVDADTCIRKVVKERVSRKPWLSIFGSGPNGSELNGAEPNGECPKARLPMLAAMYLGDDRFRPFYDRFGEGTA
ALMHDGLLAYAASD

Sequences:

>Translated_94_residues
MRPKTRCCVDADTCIRKVVKERVSRKPWLSIFGSGPNGSELNGAEPNGECPKARLPMLAAMYLGDDRFRPFYDRFGEGTA
ALMHDGLLAYAASD
>Mature_94_residues
MRPKTRCCVDADTCIRKVVKERVSRKPWLSIFGSGPNGSELNGAEPNGECPKARLPMLAAMYLGDDRFRPFYDRFGEGTA
ALMHDGLLAYAASD

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 10368; Mature: 10368

Theoretical pI: Translated: 8.33; Mature: 8.33

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

4.3 %Cys     (Translated Protein)
4.3 %Met     (Translated Protein)
8.5 %Cys+Met (Translated Protein)
4.3 %Cys     (Mature Protein)
4.3 %Met     (Mature Protein)
8.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRPKTRCCVDADTCIRKVVKERVSRKPWLSIFGSGPNGSELNGAEPNGECPKARLPMLAA
CCCCCCCEECHHHHHHHHHHHHHCCCCCEEEEECCCCCCCCCCCCCCCCCCCCHHHHHHH
MYLGDDRFRPFYDRFGEGTAALMHDGLLAYAASD
HHHCCCCCCHHHHHHCCCHHHHHHCCCCEEECCC
>Mature Secondary Structure
MRPKTRCCVDADTCIRKVVKERVSRKPWLSIFGSGPNGSELNGAEPNGECPKARLPMLAA
CCCCCCCEECHHHHHHHHHHHHHCCCCCEEEEECCCCCCCCCCCCCCCCCCCCHHHHHHH
MYLGDDRFRPFYDRFGEGTAALMHDGLLAYAASD
HHHCCCCCCHHHHHHCCCHHHHHHCCCCEEECCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA