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The map label for this gene is potH [H]

Identifier: 119775772

GI number: 119775772

Start: 3162993

End: 3163904

Strand: Reverse

Name: potH [H]

Synonym: Sama_2640

Alternate gene names: 119775772

Gene position: 3163904-3162993 (Counterclockwise)

Preceding gene: 119775773

Following gene: 119775771

Centisome position: 73.47

GC content: 54.39

Gene sequence:

>912_bases
ATGAGCAAACGAAAGAAAGGTTTTCGCTTTGCCATCCGTGGCAGGCACTTTACCCTGGGCTTTCCCTTCCTGTGGCTGAC
CCTGTTCTTTGCACTGCCCTTTGCGATTGTGCTCAAGATCAGTTTCTCCACCGCGGCGATTGCCATTCCGCCCTATGAGC
CCACCTTCACCTATGCGGATCAGCTGCTGAATGTGGCGCTGAATCTCGGCAACTACCTGTTGCTGCTGGACGATGCGCTC
TATTACACCGCATATCTGGGCTCGCTCAAGATAGCTGTGGTGTCCACTCTCGGCTGTTTGTTGCTCGGTTATCCTATGGC
TTACGCCATTGCCCGGGCTCCGGTGAAGATGCAGACGGTTCTGCTGCTTCTCATTATGCTGCCGTCCTGGACCTCGTTCC
TTATCCGTGTGTACGCCTGGATGGGGCTGCTCGCCGACACCGGCCTTATCAACAATGTGCTGTTGTGGCTGGGTGCTATC
GATGAGCCGCTGAAGATATTGAACACCAATATCGCCGTTTATATCGGTATTGTGTACGCCTATCTGCCCTTTATGGTGCT
GCCGCTCTACGCCAACCTGGTGAAGATGGACATGAGCCTGCTGGAGGCCGCGGCCGACCTGGGTTCACGCAGTATCAATA
CCTTCTGGAATATCACTTTGCCGCTGTCAAAGGGTGGCGTGATTGCTGGCTCCATGCTGGTATTTATTCCGTCTGTGGGT
GAGTTCGTTATTCCCGAACTGCTGGGCGGCCCGGACTCGCTGATGATAGGTAAGGTCTTGTGGCAGGAGTTCTTCAACAA
CCGTGACTGGCCGGTCGCCTCGGCGCTGGCGATAGTGATGCTGGGACTTTTGATTATCCCCATTACCCTGTTCCATCATT
ATCAGGCCCGTGATTTGGAGAAAGAGGCATGA

Upstream 100 bases:

>100_bases
AGTGCTCCATGACCAACACCGAACGCCGCGCGGACCACCCAACCTGGGGCGATGACATTTACATCAGCTGGGAGGCCACC
AGTGGCGTGGTATTGAGATC

Downstream 100 bases:

>100_bases
AAAAGCTGAGTTTTTCTACCGTGATGTTGTGGTTGGGGCTCATCTTCCTCTATGCCCCCATGTTTATCCTGATTTTCTAC
TCCTTCAACGCGTCCAAACT

Product: binding-protein-dependent transport systems inner membrane component

Products: ADP; phosphate; putrescine [Cytoplasm] [C]

Alternate protein names: NA

Number of amino acids: Translated: 303; Mature: 302

Protein sequence:

>303_residues
MSKRKKGFRFAIRGRHFTLGFPFLWLTLFFALPFAIVLKISFSTAAIAIPPYEPTFTYADQLLNVALNLGNYLLLLDDAL
YYTAYLGSLKIAVVSTLGCLLLGYPMAYAIARAPVKMQTVLLLLIMLPSWTSFLIRVYAWMGLLADTGLINNVLLWLGAI
DEPLKILNTNIAVYIGIVYAYLPFMVLPLYANLVKMDMSLLEAAADLGSRSINTFWNITLPLSKGGVIAGSMLVFIPSVG
EFVIPELLGGPDSLMIGKVLWQEFFNNRDWPVASALAIVMLGLLIIPITLFHHYQARDLEKEA

Sequences:

>Translated_303_residues
MSKRKKGFRFAIRGRHFTLGFPFLWLTLFFALPFAIVLKISFSTAAIAIPPYEPTFTYADQLLNVALNLGNYLLLLDDAL
YYTAYLGSLKIAVVSTLGCLLLGYPMAYAIARAPVKMQTVLLLLIMLPSWTSFLIRVYAWMGLLADTGLINNVLLWLGAI
DEPLKILNTNIAVYIGIVYAYLPFMVLPLYANLVKMDMSLLEAAADLGSRSINTFWNITLPLSKGGVIAGSMLVFIPSVG
EFVIPELLGGPDSLMIGKVLWQEFFNNRDWPVASALAIVMLGLLIIPITLFHHYQARDLEKEA
>Mature_302_residues
SKRKKGFRFAIRGRHFTLGFPFLWLTLFFALPFAIVLKISFSTAAIAIPPYEPTFTYADQLLNVALNLGNYLLLLDDALY
YTAYLGSLKIAVVSTLGCLLLGYPMAYAIARAPVKMQTVLLLLIMLPSWTSFLIRVYAWMGLLADTGLINNVLLWLGAID
EPLKILNTNIAVYIGIVYAYLPFMVLPLYANLVKMDMSLLEAAADLGSRSINTFWNITLPLSKGGVIAGSMLVFIPSVGE
FVIPELLGGPDSLMIGKVLWQEFFNNRDWPVASALAIVMLGLLIIPITLFHHYQARDLEKEA

Specific function: Required for the activity of the bacterial periplasmic transport system of putrescine [H]

COG id: COG1176

COG function: function code E; ABC-type spermidine/putrescine transport system, permease component I

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 ABC transmembrane type-1 domain [H]

Homologues:

Organism=Escherichia coli, GI1787080, Length=308, Percent_Identity=60.0649350649351, Blast_Score=361, Evalue=1e-101,
Organism=Escherichia coli, GI1787369, Length=282, Percent_Identity=41.1347517730496, Blast_Score=200, Evalue=1e-52,
Organism=Escherichia coli, GI1787713, Length=244, Percent_Identity=32.7868852459016, Blast_Score=115, Evalue=3e-27,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000515 [H]

Pfam domain/function: PF00528 BPD_transp_1 [H]

EC number: NA

Molecular weight: Translated: 33677; Mature: 33546

Theoretical pI: Translated: 8.79; Mature: 8.79

Prosite motif: PS50928 ABC_TM1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
3.6 %Met     (Translated Protein)
4.0 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
3.3 %Met     (Mature Protein)
3.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSKRKKGFRFAIRGRHFTLGFPFLWLTLFFALPFAIVLKISFSTAAIAIPPYEPTFTYAD
CCCCCCCCEEEEECCEEEECHHHHHHHHHHHHHHHHHHHEECCCEEEEECCCCCCHHHHH
QLLNVALNLGNYLLLLDDALYYTAYLGSLKIAVVSTLGCLLLGYPMAYAIARAPVKMQTV
HHHHHHHHHCCEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHH
LLLLIMLPSWTSFLIRVYAWMGLLADTGLINNVLLWLGAIDEPLKILNTNIAVYIGIVYA
HHHHHHHCCHHHHHHHHHHHHHHHHHCHHHHHHHHHHHCCCHHHHHHHCCHHHHHHHHHH
YLPFMVLPLYANLVKMDMSLLEAAADLGSRSINTFWNITLPLSKGGVIAGSMLVFIPSVG
HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEEEECCCCEEHHHHHHEECCCC
EFVIPELLGGPDSLMIGKVLWQEFFNNRDWPVASALAIVMLGLLIIPITLFHHYQARDLE
HHHHHHHCCCCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
KEA
CCC
>Mature Secondary Structure 
SKRKKGFRFAIRGRHFTLGFPFLWLTLFFALPFAIVLKISFSTAAIAIPPYEPTFTYAD
CCCCCCCEEEEECCEEEECHHHHHHHHHHHHHHHHHHHEECCCEEEEECCCCCCHHHHH
QLLNVALNLGNYLLLLDDALYYTAYLGSLKIAVVSTLGCLLLGYPMAYAIARAPVKMQTV
HHHHHHHHHCCEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHH
LLLLIMLPSWTSFLIRVYAWMGLLADTGLINNVLLWLGAIDEPLKILNTNIAVYIGIVYA
HHHHHHHCCHHHHHHHHHHHHHHHHHCHHHHHHHHHHHCCCHHHHHHHCCHHHHHHHHHH
YLPFMVLPLYANLVKMDMSLLEAAADLGSRSINTFWNITLPLSKGGVIAGSMLVFIPSVG
HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEEEECCCCEEHHHHHHEECCCC
EFVIPELLGGPDSLMIGKVLWQEFFNNRDWPVASALAIVMLGLLIIPITLFHHYQARDLE
HHHHHHHCCCCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
KEA
CCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: ATP; putrescine [Periplasm]; H2O [C]

Specific reaction: ATP + putrescine [Periplasm] + H2O = ADP + phosphate + putrescine [Cytoplasm] [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 8416922; 8905232; 9278503 [H]