Definition Shewanella amazonensis SB2B chromosome, complete genome.
Accession NC_008700
Length 4,306,142

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The map label for this gene is yajG [C]

Identifier: 119775685

GI number: 119775685

Start: 3061520

End: 3062134

Strand: Direct

Name: yajG [C]

Synonym: Sama_2553

Alternate gene names: 119775685

Gene position: 3061520-3062134 (Clockwise)

Preceding gene: 119775680

Following gene: 119775686

Centisome position: 71.1

GC content: 53.17

Gene sequence:

>615_bases
ATGGCGAACAAATCTGGTATTCTGATGCGACTTTTGTCTCGTTTTGGATCCAAGATGAAGAAATCCTTAGCCGTATTGAC
TGCCATTCTGACCCTCAGCGGCTGCGCGGGCAGTCCGTCCAATTACCTTGCTCTGAGTCCCGATGTACCCGCCATTACCA
GCAGTGCCAATGGACGTATCGCCCTGAGCACTCAGGATGCCAGAAGCTCCAACACCGCAGTGCGTATCATCAAAGGGGAT
GACCCGGCCAAACTGATGGGGACTGGCGAGTCGCCAGCTATTCAGTTGGGCAATCTGTTCCGCCAGTCTTTCAGCAGTAA
AGGCTTCCAACTCGATCCGGCCGCCACCAATATTCTTGAGCTGAAACTGGAGCGTTTACAGTCGGATATCAATGAAACCA
TGCTGGGTTACGAGGCCGCCAACGAAATCATCATCAGCGCCTATGCCCGCAACGAGCAGCAACTGTTCAGCAAACGCTAC
ACCGCCAGAGGCACCATGAAGGGGCCGCTGAGCCTGGATTTGGCTACTCTGGAGCTGGAAATGAATAAGCTCATCACCCA
GCTTGCTGGCGACATAGTCAATGACCCCGAACTGACCCAGTTTCTGATGCAATAA

Upstream 100 bases:

>100_bases
GAATAGTTTCATCGATTTCCCTATGATTGGATGCAATTGGCACAAGGAGCATGCCAGAGACAAACTGAATGCTTACTGAA
CTGGTTTTCATTGACTGGCG

Downstream 100 bases:

>100_bases
CAACGAAAAAGGAAATCATAAATGAAATGGATCATTGCAGCCCTGATGCTGGGCTTGTCTAACGTGGCGCTGGCGGCCAA
AGTGGATATTCAACCCGATA

Product: putative lipoprotein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 204; Mature: 203

Protein sequence:

>204_residues
MANKSGILMRLLSRFGSKMKKSLAVLTAILTLSGCAGSPSNYLALSPDVPAITSSANGRIALSTQDARSSNTAVRIIKGD
DPAKLMGTGESPAIQLGNLFRQSFSSKGFQLDPAATNILELKLERLQSDINETMLGYEAANEIIISAYARNEQQLFSKRY
TARGTMKGPLSLDLATLELEMNKLITQLAGDIVNDPELTQFLMQ

Sequences:

>Translated_204_residues
MANKSGILMRLLSRFGSKMKKSLAVLTAILTLSGCAGSPSNYLALSPDVPAITSSANGRIALSTQDARSSNTAVRIIKGD
DPAKLMGTGESPAIQLGNLFRQSFSSKGFQLDPAATNILELKLERLQSDINETMLGYEAANEIIISAYARNEQQLFSKRY
TARGTMKGPLSLDLATLELEMNKLITQLAGDIVNDPELTQFLMQ
>Mature_203_residues
ANKSGILMRLLSRFGSKMKKSLAVLTAILTLSGCAGSPSNYLALSPDVPAITSSANGRIALSTQDARSSNTAVRIIKGDD
PAKLMGTGESPAIQLGNLFRQSFSSKGFQLDPAATNILELKLERLQSDINETMLGYEAANEIIISAYARNEQQLFSKRYT
ARGTMKGPLSLDLATLELEMNKLITQLAGDIVNDPELTQFLMQ

Specific function: Unknown

COG id: COG3056

COG function: function code M; Uncharacterized lipoprotein

Gene ontology:

Cell location: Attached To The Membrane By A Lipid Anchor [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 22016; Mature: 21884

Theoretical pI: Translated: 9.03; Mature: 9.03

Prosite motif: PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
3.9 %Met     (Translated Protein)
4.4 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
3.4 %Met     (Mature Protein)
3.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MANKSGILMRLLSRFGSKMKKSLAVLTAILTLSGCAGSPSNYLALSPDVPAITSSANGRI
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEECCCCCCEECCCCCEE
ALSTQDARSSNTAVRIIKGDDPAKLMGTGESPAIQLGNLFRQSFSSKGFQLDPAATNILE
EEEECCCCCCCCEEEEEECCCCCEEEECCCCCHHHHHHHHHHHHCCCCEEECHHHHHHHH
LKLERLQSDINETMLGYEAANEIIISAYARNEQQLFSKRYTARGTMKGPLSLDLATLELE
HHHHHHHHHHHHHHHHHHHHHHHEEEHHHCCHHHHHHHHHHCCCCCCCCCEEEHHHHHHH
MNKLITQLAGDIVNDPELTQFLMQ
HHHHHHHHHHHCCCCHHHHHHHHC
>Mature Secondary Structure 
ANKSGILMRLLSRFGSKMKKSLAVLTAILTLSGCAGSPSNYLALSPDVPAITSSANGRI
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEECCCCCCEECCCCCEE
ALSTQDARSSNTAVRIIKGDDPAKLMGTGESPAIQLGNLFRQSFSSKGFQLDPAATNILE
EEEECCCCCCCCEEEEEECCCCCEEEECCCCCHHHHHHHHHHHHCCCCEEECHHHHHHHH
LKLERLQSDINETMLGYEAANEIIISAYARNEQQLFSKRYTARGTMKGPLSLDLATLELE
HHHHHHHHHHHHHHHHHHHHHHHEEEHHHCCHHHHHHHHHHCCCCCCCCCEEEHHHHHHH
MNKLITQLAGDIVNDPELTQFLMQ
HHHHHHHHHHHCCCCHHHHHHHHC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: NA