| Definition | Shewanella amazonensis SB2B chromosome, complete genome. |
|---|---|
| Accession | NC_008700 |
| Length | 4,306,142 |
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The map label for this gene is yajG [C]
Identifier: 119775685
GI number: 119775685
Start: 3061520
End: 3062134
Strand: Direct
Name: yajG [C]
Synonym: Sama_2553
Alternate gene names: 119775685
Gene position: 3061520-3062134 (Clockwise)
Preceding gene: 119775680
Following gene: 119775686
Centisome position: 71.1
GC content: 53.17
Gene sequence:
>615_bases ATGGCGAACAAATCTGGTATTCTGATGCGACTTTTGTCTCGTTTTGGATCCAAGATGAAGAAATCCTTAGCCGTATTGAC TGCCATTCTGACCCTCAGCGGCTGCGCGGGCAGTCCGTCCAATTACCTTGCTCTGAGTCCCGATGTACCCGCCATTACCA GCAGTGCCAATGGACGTATCGCCCTGAGCACTCAGGATGCCAGAAGCTCCAACACCGCAGTGCGTATCATCAAAGGGGAT GACCCGGCCAAACTGATGGGGACTGGCGAGTCGCCAGCTATTCAGTTGGGCAATCTGTTCCGCCAGTCTTTCAGCAGTAA AGGCTTCCAACTCGATCCGGCCGCCACCAATATTCTTGAGCTGAAACTGGAGCGTTTACAGTCGGATATCAATGAAACCA TGCTGGGTTACGAGGCCGCCAACGAAATCATCATCAGCGCCTATGCCCGCAACGAGCAGCAACTGTTCAGCAAACGCTAC ACCGCCAGAGGCACCATGAAGGGGCCGCTGAGCCTGGATTTGGCTACTCTGGAGCTGGAAATGAATAAGCTCATCACCCA GCTTGCTGGCGACATAGTCAATGACCCCGAACTGACCCAGTTTCTGATGCAATAA
Upstream 100 bases:
>100_bases GAATAGTTTCATCGATTTCCCTATGATTGGATGCAATTGGCACAAGGAGCATGCCAGAGACAAACTGAATGCTTACTGAA CTGGTTTTCATTGACTGGCG
Downstream 100 bases:
>100_bases CAACGAAAAAGGAAATCATAAATGAAATGGATCATTGCAGCCCTGATGCTGGGCTTGTCTAACGTGGCGCTGGCGGCCAA AGTGGATATTCAACCCGATA
Product: putative lipoprotein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 204; Mature: 203
Protein sequence:
>204_residues MANKSGILMRLLSRFGSKMKKSLAVLTAILTLSGCAGSPSNYLALSPDVPAITSSANGRIALSTQDARSSNTAVRIIKGD DPAKLMGTGESPAIQLGNLFRQSFSSKGFQLDPAATNILELKLERLQSDINETMLGYEAANEIIISAYARNEQQLFSKRY TARGTMKGPLSLDLATLELEMNKLITQLAGDIVNDPELTQFLMQ
Sequences:
>Translated_204_residues MANKSGILMRLLSRFGSKMKKSLAVLTAILTLSGCAGSPSNYLALSPDVPAITSSANGRIALSTQDARSSNTAVRIIKGD DPAKLMGTGESPAIQLGNLFRQSFSSKGFQLDPAATNILELKLERLQSDINETMLGYEAANEIIISAYARNEQQLFSKRY TARGTMKGPLSLDLATLELEMNKLITQLAGDIVNDPELTQFLMQ >Mature_203_residues ANKSGILMRLLSRFGSKMKKSLAVLTAILTLSGCAGSPSNYLALSPDVPAITSSANGRIALSTQDARSSNTAVRIIKGDD PAKLMGTGESPAIQLGNLFRQSFSSKGFQLDPAATNILELKLERLQSDINETMLGYEAANEIIISAYARNEQQLFSKRYT ARGTMKGPLSLDLATLELEMNKLITQLAGDIVNDPELTQFLMQ
Specific function: Unknown
COG id: COG3056
COG function: function code M; Uncharacterized lipoprotein
Gene ontology:
Cell location: Attached To The Membrane By A Lipid Anchor [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 22016; Mature: 21884
Theoretical pI: Translated: 9.03; Mature: 9.03
Prosite motif: PS00013 PROKAR_LIPOPROTEIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 3.9 %Met (Translated Protein) 4.4 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 3.4 %Met (Mature Protein) 3.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MANKSGILMRLLSRFGSKMKKSLAVLTAILTLSGCAGSPSNYLALSPDVPAITSSANGRI CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEECCCCCCEECCCCCEE ALSTQDARSSNTAVRIIKGDDPAKLMGTGESPAIQLGNLFRQSFSSKGFQLDPAATNILE EEEECCCCCCCCEEEEEECCCCCEEEECCCCCHHHHHHHHHHHHCCCCEEECHHHHHHHH LKLERLQSDINETMLGYEAANEIIISAYARNEQQLFSKRYTARGTMKGPLSLDLATLELE HHHHHHHHHHHHHHHHHHHHHHHEEEHHHCCHHHHHHHHHHCCCCCCCCCEEEHHHHHHH MNKLITQLAGDIVNDPELTQFLMQ HHHHHHHHHHHCCCCHHHHHHHHC >Mature Secondary Structure ANKSGILMRLLSRFGSKMKKSLAVLTAILTLSGCAGSPSNYLALSPDVPAITSSANGRI CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEECCCCCCEECCCCCEE ALSTQDARSSNTAVRIIKGDDPAKLMGTGESPAIQLGNLFRQSFSSKGFQLDPAATNILE EEEECCCCCCCCEEEEEECCCCCEEEECCCCCHHHHHHHHHHHHCCCCEEECHHHHHHHH LKLERLQSDINETMLGYEAANEIIISAYARNEQQLFSKRYTARGTMKGPLSLDLATLELE HHHHHHHHHHHHHHHHHHHHHHHEEEHHHCCHHHHHHHHHHCCCCCCCCCEEEHHHHHHH MNKLITQLAGDIVNDPELTQFLMQ HHHHHHHHHHHCCCCHHHHHHHHC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: NA