Definition Shewanella amazonensis SB2B chromosome, complete genome.
Accession NC_008700
Length 4,306,142

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The map label for this gene is 119774659

Identifier: 119774659

GI number: 119774659

Start: 1851483

End: 1851749

Strand: Direct

Name: 119774659

Synonym: Sama_1522

Alternate gene names: NA

Gene position: 1851483-1851749 (Clockwise)

Preceding gene: 119774658

Following gene: 119774660

Centisome position: 43.0

GC content: 46.44

Gene sequence:

>267_bases
ATGGCATTCGAAAGCAACGAAAAGGCTCAGGGTTACTGGCGCGAAAATCTTCGCCTGGTGATCAGCCTGCTGGCAGTGTG
GTTTGTCGTATCTTACGGCTTTGGCATTCTGTTGGTGGATGTGCTCAATCAAATTACCTTTATGGGTTTCAAACTGGGAT
TCTGGTTTGCTCAGCAGGGTTCCATGTACGTGTTCGTGGCGTTGATTTTTATCTACGCAGCCAAGGCGAATGCACTCGAT
AAAAAATATAACGTTCACGAAGACTGA

Upstream 100 bases:

>100_bases
AATCATCACTTAGACTAAGGTCGTGATTGAGGTCACACTCTGCCTTGTTAGATTAACCGTGACTTAACTTAATTATTACA
AACACAGGGGAGTCACAACA

Downstream 100 bases:

>100_bases
GGAGCACTGCAATGGATGTTAAAACTCTGACATACCTGATTGTGGGGCTCTCATTTGCCCTCTATATCGGTATCGCGATT
TGGTCCCGTGCCGGTTCGAC

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 88; Mature: 87

Protein sequence:

>88_residues
MAFESNEKAQGYWRENLRLVISLLAVWFVVSYGFGILLVDVLNQITFMGFKLGFWFAQQGSMYVFVALIFIYAAKANALD
KKYNVHED

Sequences:

>Translated_88_residues
MAFESNEKAQGYWRENLRLVISLLAVWFVVSYGFGILLVDVLNQITFMGFKLGFWFAQQGSMYVFVALIFIYAAKANALD
KKYNVHED
>Mature_87_residues
AFESNEKAQGYWRENLRLVISLLAVWFVVSYGFGILLVDVLNQITFMGFKLGFWFAQQGSMYVFVALIFIYAAKANALDK
KYNVHED

Specific function: Unknown

COG id: COG4327

COG function: function code S; Predicted membrane protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 10167; Mature: 10036

Theoretical pI: Translated: 7.51; Mature: 7.51

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.4 %Met     (Translated Protein)
3.4 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
2.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAFESNEKAQGYWRENLRLVISLLAVWFVVSYGFGILLVDVLNQITFMGFKLGFWFAQQG
CCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHCCC
SMYVFVALIFIYAAKANALDKKYNVHED
CHHHHHHHHHHHHHHCHHCCCCCCCCCC
>Mature Secondary Structure 
AFESNEKAQGYWRENLRLVISLLAVWFVVSYGFGILLVDVLNQITFMGFKLGFWFAQQG
CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHCCC
SMYVFVALIFIYAAKANALDKKYNVHED
CHHHHHHHHHHHHHHCHHCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA