Definition Shewanella amazonensis SB2B chromosome, complete genome.
Accession NC_008700
Length 4,306,142

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The map label for this gene is fabH [H]

Identifier: 119774647

GI number: 119774647

Start: 1833648

End: 1834772

Strand: Direct

Name: fabH [H]

Synonym: Sama_1510

Alternate gene names: 119774647

Gene position: 1833648-1834772 (Clockwise)

Preceding gene: 119774646

Following gene: 119774648

Centisome position: 42.58

GC content: 55.2

Gene sequence:

>1125_bases
ATGACTCAGTCAATTGCCATTACCGGCACCGGCGTTTTTACGCCGCCGGAAGGAATAGACAATGATGCCCTGGTGGCCAG
CTTCAATGCCTATGTGGATCTCTTTAACCGAGAGCATGAAGGCCAAATCGACCTTGGCCATATTGAGCCGCTTGCATACT
CATCCAGTGAATTTATTGAAAAGGCCTCGGGGATTAAGCATCGCTACGTGATGGTGAAAGACGGGATCCTGGACCCTGAA
ATCATGATGCCGCTTATTCCCGAGCGGCCAGCGGATGCCCTGTCACTGCAGGGTGAAATGGGGGTATTGGCCGCTCAAGA
GGCACTGGCCAATGCCGGGCTGCAACCATCAGATATCGACCTGGTCATAGTCGCCTGCGCCTATACCCAAAGGGCGTATC
CTGCAATGGCCATTGAAATTCAGCAGGCCCTCGGCACTTCGGGCTTCGGGTTTGACATGCAGGTGGCCTGCAGCTCGGCC
ACCTTCGGATTGGCCGCCGCCAAGGGCTTGATTGCCCAGGGCAGTGCCCGGCGAGCCCTGGTGATTTGCCCTGAAATCTG
CTCGGCCCAGGTGAACTACCGCGATCGCGACAGCCATTTTATTTTTGGTGATGTGGCGACAGCCATGGTCGTCGAACCTT
TAGCCGGCAGTCGCAGCCACCAGAGTTTTGAAATACTGGGGCATCGCTGTGTGACCCAGTATTCCAACAACATTCGCAGC
AATTTTGGCTTTCTCAATCGCTGCGATCCGGCCACGGCCTATGATGCCGACAAGCTGTTCCATCAGCAGGGGCGAAAAGT
CTTCAAAGAACTCTTGCCTATGATCTACAGTCATCTCGACAGTCAGTTCGCCGATGCTGGCCTCACGCCTGAAGCCATGA
AGCGGCTGTGGCTGCACCAGGCCAACATCAATATGAACCAGTTTGTGGTGAAAAAACTGCTTGGGGATGATGTGAGTGCC
GATACGGCGCCGGTAGTGCTAGACCGTTATGCCAATACCGCATCGGCCGGCTCTGTCATTGCACTGCATCAACACAGAGA
AGGGCTTGGCAGTGGCGACCTGGGGCTTCTGTGCTCCTTTGGCGCCGGTTATTCCATCGGCAGCTTTATTTTGCGGGCAG
TGTAA

Upstream 100 bases:

>100_bases
GGGATGCAAATCGTCAGGCCATTCAGGACAAGATATCGTCCACTGTGGTGATTGATTTAACCAAGCCACGGCAGACTCCG
ATTTCAGAAGGAAACAAAAC

Downstream 100 bases:

>100_bases
GGAGTATCGGTGTGCGGATTCTGGTGGTAGAAGACAGCAGCGTGGCAGCACGCATCCTCAAACATATGCTGACCCATCAG
CTCGAGTGCAGCATTGATGT

Product: 3-oxoacyl-(acyl carrier protein) synthase III

Products: NA

Alternate protein names: 3-oxoacyl-[acyl-carrier-protein] synthase III; Beta-ketoacyl-ACP synthase III; KAS III [H]

Number of amino acids: Translated: 374; Mature: 373

Protein sequence:

>374_residues
MTQSIAITGTGVFTPPEGIDNDALVASFNAYVDLFNREHEGQIDLGHIEPLAYSSSEFIEKASGIKHRYVMVKDGILDPE
IMMPLIPERPADALSLQGEMGVLAAQEALANAGLQPSDIDLVIVACAYTQRAYPAMAIEIQQALGTSGFGFDMQVACSSA
TFGLAAAKGLIAQGSARRALVICPEICSAQVNYRDRDSHFIFGDVATAMVVEPLAGSRSHQSFEILGHRCVTQYSNNIRS
NFGFLNRCDPATAYDADKLFHQQGRKVFKELLPMIYSHLDSQFADAGLTPEAMKRLWLHQANINMNQFVVKKLLGDDVSA
DTAPVVLDRYANTASAGSVIALHQHREGLGSGDLGLLCSFGAGYSIGSFILRAV

Sequences:

>Translated_374_residues
MTQSIAITGTGVFTPPEGIDNDALVASFNAYVDLFNREHEGQIDLGHIEPLAYSSSEFIEKASGIKHRYVMVKDGILDPE
IMMPLIPERPADALSLQGEMGVLAAQEALANAGLQPSDIDLVIVACAYTQRAYPAMAIEIQQALGTSGFGFDMQVACSSA
TFGLAAAKGLIAQGSARRALVICPEICSAQVNYRDRDSHFIFGDVATAMVVEPLAGSRSHQSFEILGHRCVTQYSNNIRS
NFGFLNRCDPATAYDADKLFHQQGRKVFKELLPMIYSHLDSQFADAGLTPEAMKRLWLHQANINMNQFVVKKLLGDDVSA
DTAPVVLDRYANTASAGSVIALHQHREGLGSGDLGLLCSFGAGYSIGSFILRAV
>Mature_373_residues
TQSIAITGTGVFTPPEGIDNDALVASFNAYVDLFNREHEGQIDLGHIEPLAYSSSEFIEKASGIKHRYVMVKDGILDPEI
MMPLIPERPADALSLQGEMGVLAAQEALANAGLQPSDIDLVIVACAYTQRAYPAMAIEIQQALGTSGFGFDMQVACSSAT
FGLAAAKGLIAQGSARRALVICPEICSAQVNYRDRDSHFIFGDVATAMVVEPLAGSRSHQSFEILGHRCVTQYSNNIRSN
FGFLNRCDPATAYDADKLFHQQGRKVFKELLPMIYSHLDSQFADAGLTPEAMKRLWLHQANINMNQFVVKKLLGDDVSAD
TAPVVLDRYANTASAGSVIALHQHREGLGSGDLGLLCSFGAGYSIGSFILRAV

Specific function: Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP. Catalyzes the first condensation reaction which initiates fatty acid synthesis and may therefore play a role in governing the

COG id: COG0332

COG function: function code I; 3-oxoacyl-[acyl-carrier-protein] synthase III

Gene ontology:

Cell location: Cytoplasm [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the fabH family [H]

Homologues:

Organism=Escherichia coli, GI1787333, Length=330, Percent_Identity=28.1818181818182, Blast_Score=103, Evalue=2e-23,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR013751
- InterPro:   IPR013747
- InterPro:   IPR004655
- InterPro:   IPR016039
- InterPro:   IPR016038 [H]

Pfam domain/function: PF08545 ACP_syn_III; PF08541 ACP_syn_III_C [H]

EC number: =2.3.1.180 [H]

Molecular weight: Translated: 40336; Mature: 40205

Theoretical pI: Translated: 5.18; Mature: 5.18

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.9 %Cys     (Translated Protein)
2.9 %Met     (Translated Protein)
4.8 %Cys+Met (Translated Protein)
1.9 %Cys     (Mature Protein)
2.7 %Met     (Mature Protein)
4.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTQSIAITGTGVFTPPEGIDNDALVASFNAYVDLFNREHEGQIDLGHIEPLAYSSSEFIE
CCCEEEEEECCCCCCCCCCCCCCEEEHHHHHHHHHCCCCCCCEECCCCCCCCCCHHHHHH
KASGIKHRYVMVKDGILDPEIMMPLIPERPADALSLQGEMGVLAAQEALANAGLQPSDID
HHCCCCEEEEEEECCCCCHHHHCCCCCCCCCHHHCCCCCCCHHHHHHHHHHCCCCCCCCC
LVIVACAYTQRAYPAMAIEIQQALGTSGFGFDMQVACSSATFGLAAAKGLIAQGSARRAL
EEEEEEHHHHHCCCHHHHHHHHHHCCCCCCCEEEEEECCCHHHHHHHHHHHHCCCCCEEE
VICPEICSAQVNYRDRDSHFIFGDVATAMVVEPLAGSRSHQSFEILGHRCVTQYSNNIRS
EECHHHHCCCCCCCCCCCCEEEHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHH
NFGFLNRCDPATAYDADKLFHQQGRKVFKELLPMIYSHLDSQFADAGLTPEAMKRLWLHQ
CCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHH
ANINMNQFVVKKLLGDDVSADTAPVVLDRYANTASAGSVIALHQHREGLGSGDLGLLCSF
CCCCHHHHHHHHHHCCCCCCCCCHHHHHHHCCCCCCCCEEEEECHHCCCCCCCHHEEEEC
GAGYSIGSFILRAV
CCCCHHHHHHHHCC
>Mature Secondary Structure 
TQSIAITGTGVFTPPEGIDNDALVASFNAYVDLFNREHEGQIDLGHIEPLAYSSSEFIE
CCEEEEEECCCCCCCCCCCCCCEEEHHHHHHHHHCCCCCCCEECCCCCCCCCCHHHHHH
KASGIKHRYVMVKDGILDPEIMMPLIPERPADALSLQGEMGVLAAQEALANAGLQPSDID
HHCCCCEEEEEEECCCCCHHHHCCCCCCCCCHHHCCCCCCCHHHHHHHHHHCCCCCCCCC
LVIVACAYTQRAYPAMAIEIQQALGTSGFGFDMQVACSSATFGLAAAKGLIAQGSARRAL
EEEEEEHHHHHCCCHHHHHHHHHHCCCCCCCEEEEEECCCHHHHHHHHHHHHCCCCCEEE
VICPEICSAQVNYRDRDSHFIFGDVATAMVVEPLAGSRSHQSFEILGHRCVTQYSNNIRS
EECHHHHCCCCCCCCCCCCEEEHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHH
NFGFLNRCDPATAYDADKLFHQQGRKVFKELLPMIYSHLDSQFADAGLTPEAMKRLWLHQ
CCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHH
ANINMNQFVVKKLLGDDVSADTAPVVLDRYANTASAGSVIALHQHREGLGSGDLGLLCSF
CCCCHHHHHHHHHHCCCCCCCCCHHHHHHHCCCCCCCCEEEEECHHCCCCCCCHHEEEEC
GAGYSIGSFILRAV
CCCCHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA