Definition Shewanella amazonensis SB2B chromosome, complete genome.
Accession NC_008700
Length 4,306,142

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The map label for this gene is yqgI [H]

Identifier: 119774546

GI number: 119774546

Start: 1711855

End: 1713507

Strand: Direct

Name: yqgI [H]

Synonym: Sama_1409

Alternate gene names: 119774546

Gene position: 1711855-1713507 (Clockwise)

Preceding gene: 119774545

Following gene: 119774547

Centisome position: 39.75

GC content: 57.71

Gene sequence:

>1653_bases
ATGGGTAAGTGGTTTAAATCGGGTTCCCCCTGGATTTGGATGACTGGCGGCGCGGTGAGCATCAGCCTTATCGCCGTGCT
GGGCCTCTTGCTCCTTATCGCCTGGCGCGGTCTGTCGTATTTCTGGCCAGCTGACATCTACGAGTGGAAACTGCGCGATG
CCAAAGGGGTGGAGTCCACCCTGATTGGCGAAATTTATGATAGTGAAGCCGTGCCCACTGAGCGCCTTATCACCGCCGGT
GTGGAGTTTGCCGAGCCTCCCGGCGAGTTCGTCACCCGTTATCTGGTGAAAACCGGGAACCGTGAATTCGTGGGGCTGGA
TTTCCGCTGGATTTTGGAGACTGACATCGTCTCGCGCACTACTCCCGAAGGCATTGCCAAAATCGAGCGCACCAAAAACG
GTAACTTCTATGGTTATCCGCTGGCGGTGATTGAAGATGGCAAGCGTCTGGAACTTACCGACGTGCAGCACTCACTGGAA
GAGCATATTGCTCGTGCGGTGAGCATTGCCGACAAGGCGATGACACTGCAAAAGCGTGATATCGGCGCCATCAACTACGA
GCTGGAACGCCTGCGTCTGAAAGCGCGCCGCGCCGAACTGGACGGTGAGCTCAGCGACAGCAAAAAGCAGGAGTTTGAAG
CGGCCCGTCAAAAGCTTGAAGCCGACTATCTGGTGCTGGAAAAAGAACTCTTTGCCCTGCGTGATGAAGCGGCCCGCGAC
AGCGTGATTATTCGAGACATGCGCGGTGAAGAAGTGGTGCTCAAGCTCGATAGCGTGCTGGACGTGGCCTATGCAAATCG
TCTCGGCTTCGTTGGCAAGATTGGTCACTGGTTCGCCGGTGTGGCGAACTTTGTCAGCGCCGATCCCCGCGAGGCCAACA
CCGAAGGCGGTGTCTTCCCGGCAATCTTCGGCACCGTGTTTATGGTGCTGCTGATGGCCGTAATCGTGACGCCATTCGGG
GTGATTGCCGCCATTTACCTGCACGAATATGCCAAAAAAGGCCCGCTTACCAAGATTATCCGCATTGCCGTGATTAACCT
TGCCGGCGTGCCGTCGATTGTGTACGGCGTGTTCGGTCTGGGCTTCTTTGTGTACATGCTGGGGGGCTCCATCGACCAGC
TGTTTTACCCCGAAGCGCTGCCGTCGCCCACCTTTGGTTCGCCCGGTGTGATTTGGTCGGCGCTGACGCTTGCCATTCTT
ACCCTGCCGGTGGTGATTGTGTCCACCGAGGAAGGTTTGTCGCGTATTCCAAGCGCAGTGCGACAGGGCAGTTTGGCGCT
GGGCGCCACCAAGGCTGAGACCCTGTGGCGGATTGTGATCCCCATGGCGAGCCCTGCGATTATGACGGGCCTTATCCTGG
CAGTCGCACGTGCCGCCGGTGAAGTGGCGCCGCTGATGCTGGTGGGTGTAGTCAAGCTTGCGCCAACGCTGCCCATCGAC
ATGAACTTCCCCTTTGTGCACCTGGACCGTAAGTTCATGCACCTCGGGTTCCATATTTACGACGTGGGCTTCCAGAGCCC
CAACGTGGAGGCGGCCCGTCCGTTGGTGTACGCCACCTCCTTCCTGCTGGTGTCCGTGATTGTGGCGCTGAACCTGACCG
CCATCAGTGTACGTAACCACCTGCGTGAAAAATATCGCTCCCTTGAGCATTGA

Upstream 100 bases:

>100_bases
TCGTCAACGCCTCCGTGAGCGTTACAGCTCGCTGTAATGACGCTCTGATAAGCAGGAATTGTTCTGATGGAATGCATTGA
AATGAATTGGGGAAAGCACA

Downstream 100 bases:

>100_bases
TAATCCGACGATTATCCTGAGAATTGGTACAGAATATGATTTCGATAGACAGCACTGTAATGAAGACCGAAACCCTGGAT
TTGGCCAATCTGCCCGCGTC

Product: phosphate ABC transporter permease

Products: ADP; phosphate [Cytoplasm]; phosphate [Cytoplasm] [C]

Alternate protein names: NA

Number of amino acids: Translated: 550; Mature: 549

Protein sequence:

>550_residues
MGKWFKSGSPWIWMTGGAVSISLIAVLGLLLLIAWRGLSYFWPADIYEWKLRDAKGVESTLIGEIYDSEAVPTERLITAG
VEFAEPPGEFVTRYLVKTGNREFVGLDFRWILETDIVSRTTPEGIAKIERTKNGNFYGYPLAVIEDGKRLELTDVQHSLE
EHIARAVSIADKAMTLQKRDIGAINYELERLRLKARRAELDGELSDSKKQEFEAARQKLEADYLVLEKELFALRDEAARD
SVIIRDMRGEEVVLKLDSVLDVAYANRLGFVGKIGHWFAGVANFVSADPREANTEGGVFPAIFGTVFMVLLMAVIVTPFG
VIAAIYLHEYAKKGPLTKIIRIAVINLAGVPSIVYGVFGLGFFVYMLGGSIDQLFYPEALPSPTFGSPGVIWSALTLAIL
TLPVVIVSTEEGLSRIPSAVRQGSLALGATKAETLWRIVIPMASPAIMTGLILAVARAAGEVAPLMLVGVVKLAPTLPID
MNFPFVHLDRKFMHLGFHIYDVGFQSPNVEAARPLVYATSFLLVSVIVALNLTAISVRNHLREKYRSLEH

Sequences:

>Translated_550_residues
MGKWFKSGSPWIWMTGGAVSISLIAVLGLLLLIAWRGLSYFWPADIYEWKLRDAKGVESTLIGEIYDSEAVPTERLITAG
VEFAEPPGEFVTRYLVKTGNREFVGLDFRWILETDIVSRTTPEGIAKIERTKNGNFYGYPLAVIEDGKRLELTDVQHSLE
EHIARAVSIADKAMTLQKRDIGAINYELERLRLKARRAELDGELSDSKKQEFEAARQKLEADYLVLEKELFALRDEAARD
SVIIRDMRGEEVVLKLDSVLDVAYANRLGFVGKIGHWFAGVANFVSADPREANTEGGVFPAIFGTVFMVLLMAVIVTPFG
VIAAIYLHEYAKKGPLTKIIRIAVINLAGVPSIVYGVFGLGFFVYMLGGSIDQLFYPEALPSPTFGSPGVIWSALTLAIL
TLPVVIVSTEEGLSRIPSAVRQGSLALGATKAETLWRIVIPMASPAIMTGLILAVARAAGEVAPLMLVGVVKLAPTLPID
MNFPFVHLDRKFMHLGFHIYDVGFQSPNVEAARPLVYATSFLLVSVIVALNLTAISVRNHLREKYRSLEH
>Mature_549_residues
GKWFKSGSPWIWMTGGAVSISLIAVLGLLLLIAWRGLSYFWPADIYEWKLRDAKGVESTLIGEIYDSEAVPTERLITAGV
EFAEPPGEFVTRYLVKTGNREFVGLDFRWILETDIVSRTTPEGIAKIERTKNGNFYGYPLAVIEDGKRLELTDVQHSLEE
HIARAVSIADKAMTLQKRDIGAINYELERLRLKARRAELDGELSDSKKQEFEAARQKLEADYLVLEKELFALRDEAARDS
VIIRDMRGEEVVLKLDSVLDVAYANRLGFVGKIGHWFAGVANFVSADPREANTEGGVFPAIFGTVFMVLLMAVIVTPFGV
IAAIYLHEYAKKGPLTKIIRIAVINLAGVPSIVYGVFGLGFFVYMLGGSIDQLFYPEALPSPTFGSPGVIWSALTLAILT
LPVVIVSTEEGLSRIPSAVRQGSLALGATKAETLWRIVIPMASPAIMTGLILAVARAAGEVAPLMLVGVVKLAPTLPIDM
NFPFVHLDRKFMHLGFHIYDVGFQSPNVEAARPLVYATSFLLVSVIVALNLTAISVRNHLREKYRSLEH

Specific function: Part of the binding-protein-dependent transport system yqgGHIJK. Probably responsible for the translocation of the substrate across the membrane [H]

COG id: COG0581

COG function: function code P; ABC-type phosphate transport system, permease component

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 ABC transmembrane type-1 domain [H]

Homologues:

Organism=Escherichia coli, GI1790163, Length=190, Percent_Identity=34.7368421052632, Blast_Score=90, Evalue=3e-19,
Organism=Escherichia coli, GI1790164, Length=177, Percent_Identity=33.8983050847458, Blast_Score=69, Evalue=5e-13,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000515
- InterPro:   IPR005672 [H]

Pfam domain/function: PF00528 BPD_transp_1 [H]

EC number: NA

Molecular weight: Translated: 60652; Mature: 60521

Theoretical pI: Translated: 6.45; Mature: 6.45

Prosite motif: PS50928 ABC_TM1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
2.2 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
2.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGKWFKSGSPWIWMTGGAVSISLIAVLGLLLLIAWRGLSYFWPADIYEWKLRDAKGVEST
CCCCCCCCCCEEEEECCHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHEEECCCCCCCHHH
LIGEIYDSEAVPTERLITAGVEFAEPPGEFVTRYLVKTGNREFVGLDFRWILETDIVSRT
HHHHHHCCCCCCHHHHHHCCCCCCCCCHHHHHHHHHHCCCCEEEECCEEEEEEHHHHCCC
TPEGIAKIERTKNGNFYGYPLAVIEDGKRLELTDVQHSLEEHIARAVSIADKAMTLQKRD
CCHHHHHHHHCCCCCEEEEEEEEECCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
IGAINYELERLRLKARRAELDGELSDSKKQEFEAARQKLEADYLVLEKELFALRDEAARD
CCHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCC
SVIIRDMRGEEVVLKLDSVLDVAYANRLGFVGKIGHWFAGVANFVSADPREANTEGGVFP
CEEEEECCCCEEEEEHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCHH
AIFGTVFMVLLMAVIVTPFGVIAAIYLHEYAKKGPLTKIIRIAVINLAGVPSIVYGVFGL
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCHHHHHHHHHHH
GFFVYMLGGSIDQLFYPEALPSPTFGSPGVIWSALTLAILTLPVVIVSTEEGLSRIPSAV
HHHHHHHCCCHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHEEEEECHHHHHHHHHHH
RQGSLALGATKAETLWRIVIPMASPAIMTGLILAVARAAGEVAPLMLVGVVKLAPTLPID
HCCCEEECCCHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCCCCCC
MNFPFVHLDRKFMHLGFHIYDVGFQSPNVEAARPLVYATSFLLVSVIVALNLTAISVRNH
CCCCEEECCHHHHHHCEEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LREKYRSLEH
HHHHHHHCCC
>Mature Secondary Structure 
GKWFKSGSPWIWMTGGAVSISLIAVLGLLLLIAWRGLSYFWPADIYEWKLRDAKGVEST
CCCCCCCCCEEEEECCHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHEEECCCCCCCHHH
LIGEIYDSEAVPTERLITAGVEFAEPPGEFVTRYLVKTGNREFVGLDFRWILETDIVSRT
HHHHHHCCCCCCHHHHHHCCCCCCCCCHHHHHHHHHHCCCCEEEECCEEEEEEHHHHCCC
TPEGIAKIERTKNGNFYGYPLAVIEDGKRLELTDVQHSLEEHIARAVSIADKAMTLQKRD
CCHHHHHHHHCCCCCEEEEEEEEECCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
IGAINYELERLRLKARRAELDGELSDSKKQEFEAARQKLEADYLVLEKELFALRDEAARD
CCHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCC
SVIIRDMRGEEVVLKLDSVLDVAYANRLGFVGKIGHWFAGVANFVSADPREANTEGGVFP
CEEEEECCCCEEEEEHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCHH
AIFGTVFMVLLMAVIVTPFGVIAAIYLHEYAKKGPLTKIIRIAVINLAGVPSIVYGVFGL
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCHHHHHHHHHHH
GFFVYMLGGSIDQLFYPEALPSPTFGSPGVIWSALTLAILTLPVVIVSTEEGLSRIPSAV
HHHHHHHCCCHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHEEEEECHHHHHHHHHHH
RQGSLALGATKAETLWRIVIPMASPAIMTGLILAVARAAGEVAPLMLVGVVKLAPTLPID
HCCCEEECCCHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCCCCCC
MNFPFVHLDRKFMHLGFHIYDVGFQSPNVEAARPLVYATSFLLVSVIVALNLTAISVRNH
CCCCEEECCHHHHHHCEEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LREKYRSLEH
HHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: ATP; phosphate [Periplasm]; H2O [C]

Specific reaction: ATP + phosphate [Periplasm] + H2O = ADP + phosphate [Cytoplasm] + phosphate [Cytoplasm] [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 8760913; 8969508; 9384377 [H]