Definition Shewanella amazonensis SB2B chromosome, complete genome.
Accession NC_008700
Length 4,306,142

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The map label for this gene is rec2 [H]

Identifier: 119774473

GI number: 119774473

Start: 1627401

End: 1629698

Strand: Direct

Name: rec2 [H]

Synonym: Sama_1336

Alternate gene names: 119774473

Gene position: 1627401-1629698 (Clockwise)

Preceding gene: 119774471

Following gene: 119774474

Centisome position: 37.79

GC content: 57.66

Gene sequence:

>2298_bases
GTGAAGAACCCATTTCTGCTGGGCTTTTGTGCCCTTGTCATCTCATCGCTGCTCTGGCCAGTGCTGCCGCCCTGGCCGGC
CTGCCTGCTTTTGCTTGTGGCATTGGGGTGTTACCGCAAGTTGCCTGTGCTCAGTGGAGCCCTGACTGCCGTGGCGTGGG
TTGCTGTGTACACCCATATGCTGTTCGATTACAGCCACCTGCAACAAGCCGGTGATTCCTGGGTGCGTGGCGAGATAATA
GCACCTGTGTCTGACAGCGGCGACTGGCAGAGTATAGATATACGTCTTGTTAAACCAAAATTAATCTGGCCTGTTGAGGG
CAATATCAGGCTCAACTGGCGAACAACTGACCAAATTCGTCCCGGGGAGCAGTGGGAATTTCGTCTTGCACCCCGTTCCA
TCACCTCGCCCCTCAACGAAGGCGCCTTCAACGGTCAGCGTTACCTGCTATCACGCCATGTGGGTATCAAGGCAAGAGTG
CTGGAAGCAAGAAAAGTATCCGAGGCGTCAGGGCTTCGCGGGCTATTACTGGAGCACATTGGCCATGCCATATCGGAGAA
ACCCCGGCAGGCGCTGCTGTACCCACTGCTGACGGGGGAACAGCAGGGCATAGATGCGCAGACCTGGCAGCGGCTCAGGC
AAACCGGCACCGGGCACCTGATGGCCATCTCCGGGTTGCATATGTCGGTGCTCGGAGCCTGGCTGTTGCTGCTGTGCCGC
GCGCTGTTGACCTCGTTTGCGCCGCGCCAGGACAGGCGTAATTTGGTGATTGCCATGATAGTCGCCACTGTGGGGTGTCT
GCTCTATGGTCTGCTGGCGGGCATGGGCATTCCTACCCGCCGGGCCTTTATCATGCTGGCATTGGTGGTGCTGCTGACCC
TCAGTCGCCGTTTCGCCTCGCCCTGGGAGCGTTTGTTGTACGCCCTTGCCGCTGTGTTGTTTCTCGATCCTTTGTCGCCA
CTGTCTGCCGGATTTTGGCTGTCTTTTGGCGCCATCGTGATTATGTTACTGCTATTGGACCGGCCGCCCGCCCACCTTGA
GGGTGTCCCCGGTCGATTAAAGCACTACCTGATGTCGCTGGTGACGCTGCAGTTGGCACTCAGTATCGGACTGGGAGTAT
TGCAGCTGGTGCTCTTTGGCGGTGTCAGTGTCCATAGCCTGTGGATTAATCTGCTGATGGTGCCCTGGTTTTCGCTGGTG
GCCATTCCCCTGGCGTTGGCAGGGCTTGTGTTTTTTGTTCTCTTGCTGCCTTTTGGGATATTGGCCGACTGGGCGTTTAC
TCCCGCCCTCATGGCATTGATACCGCTGGATGGGCTTCTTACGTTCAGTGACCACTTACCCGGCGCCTGGATAAGCGTGC
CGGCACAGTTGATTGCGCCCCTGTGTTTTGCCATTGCAGGCGCTGTTTTATTGTTTTTGCCTTTGGCGCGGGGTGTTAAG
TGGGTGAGCGCCTCCTTACTGTTGCCGCTACTGATAACTCTGAGTGTGAAAGGCGGGCCCCAATGGCAGATGCATTTACT
GGATGTAGGGCAGGGGCTGGCCGTCGTGGTTTTCAGCCGGGATCAAACACTGGTGTACGACACCGGATTGGCCTTTGGTG
ACACCTTCTCCCATGGTGAGCGAACCCTGGTGCCATTTTTGCGGGCCAAGGGACGTAATCACATCGATGTGTTGGTCATC
AGCCATGAGGATAAAGACCATGCCGGTGGCGCCGCCGCGCTGGCCAGAGCAATGCCAGTCCACTTACTCATCAGCGATAC
CCGGGCTGCAAGGGATACACTGGCGATGGAACATGCGCCTTGCCGCCCTCAGGCATTCGCCCTTGGCAATCTGTGGGTAG
AGGTCCTGTCGCCCGCAGACTCACCGGCTGGAAGAGTAGACAATAATGCTTCCTGTGTGGTGACAGTGGGCGATGGTCAT
TCGCGGCTGCTGTTGCCCGGCGACATTGAAGCCGAAGGGGAGACGCGGCTCCTTGGCAGTGGCGAGGCGTTGAACGCCAA
TGTCTTAGTGGCACCCCACCATGGCAGCCTGACGTCATCGACTCCGGCCTTTGTCGCGGGCGTAGCACCGGCCATCACCC
TCTTTGCTGCCGGCGCCAACAACAGATACGGTTTTCCTAAAGACGCCGTGGTGCAGCGATACCTGGCCCAGGGCAGTCAA
ACGTTTACTGCGGCGGATACCGGCCAGATAAGCCTGTACCTTGATGATGAAATCACAGTGAAAACCTATCGGGGTTCGCT
GGCCCCTTTTTGGTATAACCGGGTCTTTGGAGTTGGTGGCAGGCCGATTACAGAGTAG

Upstream 100 bases:

>100_bases
TCTTTAGATGCTTGTGATCTTTCAGTGCATCCGGGTGCGGCATAAACCTTTTGATGAGCTTTTTTGGCATAGGCGGATAA
TGCTGTCTTAACTTACTGCT

Downstream 100 bases:

>100_bases
AATGCGGACTTTGTCATACTCTCAGATGAATCAATGACTACAGCTCATAATCAGGAAGTTTGGACTGTGTTCAAACGCCT
CATGGGGTACCTCAAACCCA

Product: DNA internalization-related competence protein ComEC/Rec2

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 765; Mature: 765

Protein sequence:

>765_residues
MKNPFLLGFCALVISSLLWPVLPPWPACLLLLVALGCYRKLPVLSGALTAVAWVAVYTHMLFDYSHLQQAGDSWVRGEII
APVSDSGDWQSIDIRLVKPKLIWPVEGNIRLNWRTTDQIRPGEQWEFRLAPRSITSPLNEGAFNGQRYLLSRHVGIKARV
LEARKVSEASGLRGLLLEHIGHAISEKPRQALLYPLLTGEQQGIDAQTWQRLRQTGTGHLMAISGLHMSVLGAWLLLLCR
ALLTSFAPRQDRRNLVIAMIVATVGCLLYGLLAGMGIPTRRAFIMLALVVLLTLSRRFASPWERLLYALAAVLFLDPLSP
LSAGFWLSFGAIVIMLLLLDRPPAHLEGVPGRLKHYLMSLVTLQLALSIGLGVLQLVLFGGVSVHSLWINLLMVPWFSLV
AIPLALAGLVFFVLLLPFGILADWAFTPALMALIPLDGLLTFSDHLPGAWISVPAQLIAPLCFAIAGAVLLFLPLARGVK
WVSASLLLPLLITLSVKGGPQWQMHLLDVGQGLAVVVFSRDQTLVYDTGLAFGDTFSHGERTLVPFLRAKGRNHIDVLVI
SHEDKDHAGGAAALARAMPVHLLISDTRAARDTLAMEHAPCRPQAFALGNLWVEVLSPADSPAGRVDNNASCVVTVGDGH
SRLLLPGDIEAEGETRLLGSGEALNANVLVAPHHGSLTSSTPAFVAGVAPAITLFAAGANNRYGFPKDAVVQRYLAQGSQ
TFTAADTGQISLYLDDEITVKTYRGSLAPFWYNRVFGVGGRPITE

Sequences:

>Translated_765_residues
MKNPFLLGFCALVISSLLWPVLPPWPACLLLLVALGCYRKLPVLSGALTAVAWVAVYTHMLFDYSHLQQAGDSWVRGEII
APVSDSGDWQSIDIRLVKPKLIWPVEGNIRLNWRTTDQIRPGEQWEFRLAPRSITSPLNEGAFNGQRYLLSRHVGIKARV
LEARKVSEASGLRGLLLEHIGHAISEKPRQALLYPLLTGEQQGIDAQTWQRLRQTGTGHLMAISGLHMSVLGAWLLLLCR
ALLTSFAPRQDRRNLVIAMIVATVGCLLYGLLAGMGIPTRRAFIMLALVVLLTLSRRFASPWERLLYALAAVLFLDPLSP
LSAGFWLSFGAIVIMLLLLDRPPAHLEGVPGRLKHYLMSLVTLQLALSIGLGVLQLVLFGGVSVHSLWINLLMVPWFSLV
AIPLALAGLVFFVLLLPFGILADWAFTPALMALIPLDGLLTFSDHLPGAWISVPAQLIAPLCFAIAGAVLLFLPLARGVK
WVSASLLLPLLITLSVKGGPQWQMHLLDVGQGLAVVVFSRDQTLVYDTGLAFGDTFSHGERTLVPFLRAKGRNHIDVLVI
SHEDKDHAGGAAALARAMPVHLLISDTRAARDTLAMEHAPCRPQAFALGNLWVEVLSPADSPAGRVDNNASCVVTVGDGH
SRLLLPGDIEAEGETRLLGSGEALNANVLVAPHHGSLTSSTPAFVAGVAPAITLFAAGANNRYGFPKDAVVQRYLAQGSQ
TFTAADTGQISLYLDDEITVKTYRGSLAPFWYNRVFGVGGRPITE
>Mature_765_residues
MKNPFLLGFCALVISSLLWPVLPPWPACLLLLVALGCYRKLPVLSGALTAVAWVAVYTHMLFDYSHLQQAGDSWVRGEII
APVSDSGDWQSIDIRLVKPKLIWPVEGNIRLNWRTTDQIRPGEQWEFRLAPRSITSPLNEGAFNGQRYLLSRHVGIKARV
LEARKVSEASGLRGLLLEHIGHAISEKPRQALLYPLLTGEQQGIDAQTWQRLRQTGTGHLMAISGLHMSVLGAWLLLLCR
ALLTSFAPRQDRRNLVIAMIVATVGCLLYGLLAGMGIPTRRAFIMLALVVLLTLSRRFASPWERLLYALAAVLFLDPLSP
LSAGFWLSFGAIVIMLLLLDRPPAHLEGVPGRLKHYLMSLVTLQLALSIGLGVLQLVLFGGVSVHSLWINLLMVPWFSLV
AIPLALAGLVFFVLLLPFGILADWAFTPALMALIPLDGLLTFSDHLPGAWISVPAQLIAPLCFAIAGAVLLFLPLARGVK
WVSASLLLPLLITLSVKGGPQWQMHLLDVGQGLAVVVFSRDQTLVYDTGLAFGDTFSHGERTLVPFLRAKGRNHIDVLVI
SHEDKDHAGGAAALARAMPVHLLISDTRAARDTLAMEHAPCRPQAFALGNLWVEVLSPADSPAGRVDNNASCVVTVGDGH
SRLLLPGDIEAEGETRLLGSGEALNANVLVAPHHGSLTSSTPAFVAGVAPAITLFAAGANNRYGFPKDAVVQRYLAQGSQ
TFTAADTGQISLYLDDEITVKTYRGSLAPFWYNRVFGVGGRPITE

Specific function: Might contribute to transformation as a member of a membrane-bound pore complex at the base of the transformasome. It could directly interact with transforming DNA during translocation indirectly by participating in the assembly of the pore [H]

COG id: COG2333

COG function: function code R; Predicted hydrolase (metallo-beta-lactamase superfamily)

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI87081801, Length=687, Percent_Identity=30.2765647743814, Blast_Score=251, Evalue=1e-67,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001279
- InterPro:   IPR004477
- InterPro:   IPR004797 [H]

Pfam domain/function: PF03772 Competence; PF00753 Lactamase_B [H]

EC number: NA

Molecular weight: Translated: 82955; Mature: 82955

Theoretical pI: Translated: 8.70; Mature: 8.70

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
2.9 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
2.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKNPFLLGFCALVISSLLWPVLPPWPACLLLLVALGCYRKLPVLSGALTAVAWVAVYTHM
CCCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHH
LFDYSHLQQAGDSWVRGEIIAPVSDSGDWQSIDIRLVKPKLIWPVEGNIRLNWRTTDQIR
HHHHHHHHHCCCCCCCCEEEEECCCCCCCEEEEEEEECCEEEEECCCCEEEEEEECCCCC
PGEQWEFRLAPRSITSPLNEGAFNGQRYLLSRHVGIKARVLEARKVSEASGLRGLLLEHI
CCCCCEEEECCHHHCCCHHCCCCCCHHHHHHHCCCCHHHHHHHHHHHHHCCHHHHHHHHH
GHAISEKPRQALLYPLLTGEQQGIDAQTWQRLRQTGTGHLMAISGLHMSVLGAWLLLLCR
HHHHHCCCHHHHHHHHCCCCCCCCCHHHHHHHHHCCCCCEEEECCHHHHHHHHHHHHHHH
ALLTSFAPRQDRRNLVIAMIVATVGCLLYGLLAGMGIPTRRAFIMLALVVLLTLSRRFAS
HHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHCC
PWERLLYALAAVLFLDPLSPLSAGFWLSFGAIVIMLLLLDRPPAHLEGVPGRLKHYLMSL
HHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHCCCCHHCCCCCHHHHHHHHHH
VTLQLALSIGLGVLQLVLFGGVSVHSLWINLLMVPWFSLVAIPLALAGLVFFVLLLPFGI
HHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LADWAFTPALMALIPLDGLLTFSDHLPGAWISVPAQLIAPLCFAIAGAVLLFLPLARGVK
HHHHHHHHHHHHHHCCCCCEEECCCCCCHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHH
WVSASLLLPLLITLSVKGGPQWQMHLLDVGQGLAVVVFSRDQTLVYDTGLAFGDTFSHGE
HHHHHHHHHHHHHEECCCCCCEEEEEEECCCCEEEEEEECCCEEEEECCCCCCCCCCCCC
RTLVPFLRAKGRNHIDVLVISHEDKDHAGGAAALARAMPVHLLISDTRAARDTLAMEHAP
HHHHHHHHHCCCCCEEEEEEECCCCCCCCHHHHHHHHCCEEEEEECCHHHHHHHHHCCCC
CRPQAFALGNLWVEVLSPADSPAGRVDNNASCVVTVGDGHSRLLLPGDIEAEGETRLLGS
CCCCHHHHHHHHHHHHCCCCCCCCCCCCCCEEEEEECCCCCEEEECCCCCCCCCEEEEEC
GEALNANVLVAPHHGSLTSSTPAFVAGVAPAITLFAAGANNRYGFPKDAVVQRYLAQGSQ
CCEECCEEEEECCCCCCCCCCCHHHHHHHHHHHHEECCCCCCCCCCHHHHHHHHHHCCCC
TFTAADTGQISLYLDDEITVKTYRGSLAPFWYNRVFGVGGRPITE
EEEEECCCEEEEEECCCEEEEEECCCCCHHHHHHHCCCCCCCCCC
>Mature Secondary Structure
MKNPFLLGFCALVISSLLWPVLPPWPACLLLLVALGCYRKLPVLSGALTAVAWVAVYTHM
CCCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHH
LFDYSHLQQAGDSWVRGEIIAPVSDSGDWQSIDIRLVKPKLIWPVEGNIRLNWRTTDQIR
HHHHHHHHHCCCCCCCCEEEEECCCCCCCEEEEEEEECCEEEEECCCCEEEEEEECCCCC
PGEQWEFRLAPRSITSPLNEGAFNGQRYLLSRHVGIKARVLEARKVSEASGLRGLLLEHI
CCCCCEEEECCHHHCCCHHCCCCCCHHHHHHHCCCCHHHHHHHHHHHHHCCHHHHHHHHH
GHAISEKPRQALLYPLLTGEQQGIDAQTWQRLRQTGTGHLMAISGLHMSVLGAWLLLLCR
HHHHHCCCHHHHHHHHCCCCCCCCCHHHHHHHHHCCCCCEEEECCHHHHHHHHHHHHHHH
ALLTSFAPRQDRRNLVIAMIVATVGCLLYGLLAGMGIPTRRAFIMLALVVLLTLSRRFAS
HHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHCC
PWERLLYALAAVLFLDPLSPLSAGFWLSFGAIVIMLLLLDRPPAHLEGVPGRLKHYLMSL
HHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHCCCCHHCCCCCHHHHHHHHHH
VTLQLALSIGLGVLQLVLFGGVSVHSLWINLLMVPWFSLVAIPLALAGLVFFVLLLPFGI
HHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LADWAFTPALMALIPLDGLLTFSDHLPGAWISVPAQLIAPLCFAIAGAVLLFLPLARGVK
HHHHHHHHHHHHHHCCCCCEEECCCCCCHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHH
WVSASLLLPLLITLSVKGGPQWQMHLLDVGQGLAVVVFSRDQTLVYDTGLAFGDTFSHGE
HHHHHHHHHHHHHEECCCCCCEEEEEEECCCCEEEEEEECCCEEEEECCCCCCCCCCCCC
RTLVPFLRAKGRNHIDVLVISHEDKDHAGGAAALARAMPVHLLISDTRAARDTLAMEHAP
HHHHHHHHHCCCCCEEEEEEECCCCCCCCHHHHHHHHCCEEEEEECCHHHHHHHHHCCCC
CRPQAFALGNLWVEVLSPADSPAGRVDNNASCVVTVGDGHSRLLLPGDIEAEGETRLLGS
CCCCHHHHHHHHHHHHCCCCCCCCCCCCCCEEEEEECCCCCEEEECCCCCCCCCEEEEEC
GEALNANVLVAPHHGSLTSSTPAFVAGVAPAITLFAAGANNRYGFPKDAVVQRYLAQGSQ
CCEECCEEEEECCCCCCCCCCCHHHHHHHHHHHHEECCCCCCCCCCHHHHHHHHHHCCCC
TFTAADTGQISLYLDDEITVKTYRGSLAPFWYNRVFGVGGRPITE
EEEEECCCEEEEEECCCEEEEEECCCCCHHHHHHHCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 8063112; 7542800 [H]