Click here to switch to the map view.

The map label for this gene is 119774457

Identifier: 119774457

GI number: 119774457

Start: 1604790

End: 1607255

Strand: Direct

Name: 119774457

Synonym: Sama_1320

Alternate gene names: NA

Gene position: 1604790-1607255 (Clockwise)

Preceding gene: 119774455

Following gene: 119774459

Centisome position: 37.27

GC content: 52.51

Gene sequence:

>2466_bases
ATGAAGTCAGCGTTTAAGTTATGGTTGGCCACCTTCCTCTCGTTTTTATTAATAGCCTGCGGGGGCGGTGGTTCGATTTC
AGATACAGGGGGAGGGGATGGTGGTACGCCTCCAACAGACACAATTACGGTCACAGCTGCTATAACATTTAGCTCTTCCA
ACAGCACCATTGGCATAGATACTCCGGCCACAGTGACAGCAAATGTTAAAGGATCGCTTTCTGGTGCAAAAGCTGGAAAA
TTGGTCACCTTTAAACTGAATAACGCATCTTTAGGCACTTTTACCCCATCCACAGGAACAGCCCTGACCGATGCAGAGGG
TAATGCCACTATTACGCTGAGTACGGCAGATATTGCCGGAGCAGGAACAGTCACTGCGAGTGTCGACACCGGTGAGTCCA
GCGACCCTGTTGGTTTTACCATGAAAGGTGACGGCGGAAGCTCAACCGGTGGTGAAGCCCAGGTGAGCTTGACGCTTACC
GATGCAGATGGTGCCCCAACCGATACCATTTCGAGCACCAAGCCCGGCAAGTTGGTTGCCACTGTTTCAGGTATTTCCAA
GACAGTCATTGTTACATTCAACTCTTCCCTTGGCGATTTGCCGATTAAAACCGCGATTACAGATGCAAACGGCAAGGCCA
GTGTCGATATTTATGCAGGCAGTCAACCTGGTGCTGCCGAGGCTACAGCGACTCTTTCAACCGGTGAAAGCGGCCAGAAA
GTGTTTGTGATTGGCGCCAGCAATGTGCTGATGGGAACTGCTGAAGGCGACTTTGTTGCGGGTAAGGCCTCTGTGAGCGC
CAGTGCTATTTCTGCAGGCGGTACTGCGACGGTTTCTGTCAAGCTTCAAGATGACCAGGGTATCCTCTTTACCGAACCTG
TCAGTGTCAGCTTCTCGTCAACCTGTGCGACCAAGGGGCAAGCTGAGCTAAGTAGCCCAATTACTGCCGTTGGTGGTATC
GCGACCAGCACTTATTTGGCTAAAGGTTGTGTGGGTGATGACAATATCAGTGTCTCAGCAGATGTAGGTGGCAAGAACCT
GTCAGCGACTGGCACATTGAATGTGCTTGCAGCAGATGCTGGCAGTATTGTCTTTGTCGGAGCAACTCCTGAAAATATCA
GTATCAAGGGCACGGGTGGTGATGAGTCATCCACTGTGAAGTTCAAGGTACTAGATACCAATGGCAACCCGGTGGCCAAC
AAGGCTGTGTCTTTCACGTTAAACACCTCCGTGGGGGGCCTGACGCTAAGCCCAGCCACAGCCACTACCAATAGCCAGGG
CATTGCCCAAACAGTGGTAACTTCCGGTGCAGTGGCAACTACGGTGCGAGTTACTGCATCGATTGACGGCACCAACCCGG
TTATTTCGAGCCAATCCAGCGTGCTGGTGATTTCTACCGGTAAGCCCGATCAGGACAGCTTCTCTTTATCTGCCGAAGTA
TTGAATGCTGAAGGCTGGGATATTGATGGCACCGAAGTGAAGGTGACAGCGCGTCTTGCGGATGCCTTTAACAACCCAGT
GCCAGATGGAACGGCGGTTTATTTCACCACTGAAGGTGGTTCAATAGACCCGTCCTGTACCACTGCTAATGGAGCCTGTA
CTGTCGTATGGCGCAGTCAAAATGCCAGGCCTGGCGGCGTGACGCTTATCGACGGTTCGGGCGCCATGGTTCGTAACCCA
ACGCCTGTGTTGGTAGAAGATGGTGGTCGCTATTACGGCTTCTATGGCCAGAAGTTTGGCGGCCGCGCAACCATTACCGC
CACCGCTGTAGGTGAAGAGTCCTTCCCTGATACCAACGGTAACGGCCGATTTGATGCTGCGGAAATGGATGCCTTCTTAA
ATGGAACCGATGTTAGCGGCGACAGCTACGATTTGGCTGATGCCTTTGTCGACCATAACGAAGATGGCATATTCAACCCT
CAGCAAGCGGGTGGTCAAACCGGTGGCGAAAATGAAGAGCTCGTTGATTTTGACGAAGACGGGCAATTTGATGCTGCAGA
TAGCAAATACAATGGCGTGCTGTGCTCAGTGCCTGCCCATGCCGGCTGCGCAAGTGTCGATGCTCAGTCACTCTTCGTCA
GACGCAGTCTGGTGCTGGTGATGTCAGGCAGTGAGGCTTTTGCGACTGCAGCAGACGATGTGGTGATTGACGACCGTGAT
GGTGTGTCAACCGGCGGCAGCATCGACATTAACGGTAAATCGACTGCGTCTGTGGTCTTTGCCATCTCTGATTTGCACAA
TCAGCAGATGCCTGCAGGAACTAAAGTTCAATTCGCTACATCGACGGGTTCGATTGCCAGTACCGCCAGCTACACCTGGC
CCAGCAGTAACTACAATGGTGCGAGACAATTCTCCGTGACCGTGAAGGGGGCAGACCAACCTGAGAGCGGCGTGTTCTCT
GTGACTGTTACCACCCCAGGCGGTACGGCCACCGAGGTACTGACAGTCCCTGTAAACATCTATTGA

Upstream 100 bases:

>100_bases
TCGGGTAATAGAAAAGTTACATGAAAATTGTGTATTGTTAGCCTATAAGTAAGAAGCGGAATGCTTAGGTATTTTAACTA
GAGTAACAGGGAGTCTGACA

Downstream 100 bases:

>100_bases
TTTAGAGTTCACAATTCAAAAATACGAAAAGGCCACTTCTAAGAGTGGCCTTTCTTTTTATTGATTCACAAACATCTGCA
GAGGCTTTGGGGACTTTTGA

Product: Ig-like, group 1

Products: NA

Alternate protein names: Intimin/Invasin Family Protein; Invasin Domain-Containing Protein; Ig Domain Domain Protein; Lipoprotein

Number of amino acids: Translated: 821; Mature: 821

Protein sequence:

>821_residues
MKSAFKLWLATFLSFLLIACGGGGSISDTGGGDGGTPPTDTITVTAAITFSSSNSTIGIDTPATVTANVKGSLSGAKAGK
LVTFKLNNASLGTFTPSTGTALTDAEGNATITLSTADIAGAGTVTASVDTGESSDPVGFTMKGDGGSSTGGEAQVSLTLT
DADGAPTDTISSTKPGKLVATVSGISKTVIVTFNSSLGDLPIKTAITDANGKASVDIYAGSQPGAAEATATLSTGESGQK
VFVIGASNVLMGTAEGDFVAGKASVSASAISAGGTATVSVKLQDDQGILFTEPVSVSFSSTCATKGQAELSSPITAVGGI
ATSTYLAKGCVGDDNISVSADVGGKNLSATGTLNVLAADAGSIVFVGATPENISIKGTGGDESSTVKFKVLDTNGNPVAN
KAVSFTLNTSVGGLTLSPATATTNSQGIAQTVVTSGAVATTVRVTASIDGTNPVISSQSSVLVISTGKPDQDSFSLSAEV
LNAEGWDIDGTEVKVTARLADAFNNPVPDGTAVYFTTEGGSIDPSCTTANGACTVVWRSQNARPGGVTLIDGSGAMVRNP
TPVLVEDGGRYYGFYGQKFGGRATITATAVGEESFPDTNGNGRFDAAEMDAFLNGTDVSGDSYDLADAFVDHNEDGIFNP
QQAGGQTGGENEELVDFDEDGQFDAADSKYNGVLCSVPAHAGCASVDAQSLFVRRSLVLVMSGSEAFATAADDVVIDDRD
GVSTGGSIDINGKSTASVVFAISDLHNQQMPAGTKVQFATSTGSIASTASYTWPSSNYNGARQFSVTVKGADQPESGVFS
VTVTTPGGTATEVLTVPVNIY

Sequences:

>Translated_821_residues
MKSAFKLWLATFLSFLLIACGGGGSISDTGGGDGGTPPTDTITVTAAITFSSSNSTIGIDTPATVTANVKGSLSGAKAGK
LVTFKLNNASLGTFTPSTGTALTDAEGNATITLSTADIAGAGTVTASVDTGESSDPVGFTMKGDGGSSTGGEAQVSLTLT
DADGAPTDTISSTKPGKLVATVSGISKTVIVTFNSSLGDLPIKTAITDANGKASVDIYAGSQPGAAEATATLSTGESGQK
VFVIGASNVLMGTAEGDFVAGKASVSASAISAGGTATVSVKLQDDQGILFTEPVSVSFSSTCATKGQAELSSPITAVGGI
ATSTYLAKGCVGDDNISVSADVGGKNLSATGTLNVLAADAGSIVFVGATPENISIKGTGGDESSTVKFKVLDTNGNPVAN
KAVSFTLNTSVGGLTLSPATATTNSQGIAQTVVTSGAVATTVRVTASIDGTNPVISSQSSVLVISTGKPDQDSFSLSAEV
LNAEGWDIDGTEVKVTARLADAFNNPVPDGTAVYFTTEGGSIDPSCTTANGACTVVWRSQNARPGGVTLIDGSGAMVRNP
TPVLVEDGGRYYGFYGQKFGGRATITATAVGEESFPDTNGNGRFDAAEMDAFLNGTDVSGDSYDLADAFVDHNEDGIFNP
QQAGGQTGGENEELVDFDEDGQFDAADSKYNGVLCSVPAHAGCASVDAQSLFVRRSLVLVMSGSEAFATAADDVVIDDRD
GVSTGGSIDINGKSTASVVFAISDLHNQQMPAGTKVQFATSTGSIASTASYTWPSSNYNGARQFSVTVKGADQPESGVFS
VTVTTPGGTATEVLTVPVNIY
>Mature_821_residues
MKSAFKLWLATFLSFLLIACGGGGSISDTGGGDGGTPPTDTITVTAAITFSSSNSTIGIDTPATVTANVKGSLSGAKAGK
LVTFKLNNASLGTFTPSTGTALTDAEGNATITLSTADIAGAGTVTASVDTGESSDPVGFTMKGDGGSSTGGEAQVSLTLT
DADGAPTDTISSTKPGKLVATVSGISKTVIVTFNSSLGDLPIKTAITDANGKASVDIYAGSQPGAAEATATLSTGESGQK
VFVIGASNVLMGTAEGDFVAGKASVSASAISAGGTATVSVKLQDDQGILFTEPVSVSFSSTCATKGQAELSSPITAVGGI
ATSTYLAKGCVGDDNISVSADVGGKNLSATGTLNVLAADAGSIVFVGATPENISIKGTGGDESSTVKFKVLDTNGNPVAN
KAVSFTLNTSVGGLTLSPATATTNSQGIAQTVVTSGAVATTVRVTASIDGTNPVISSQSSVLVISTGKPDQDSFSLSAEV
LNAEGWDIDGTEVKVTARLADAFNNPVPDGTAVYFTTEGGSIDPSCTTANGACTVVWRSQNARPGGVTLIDGSGAMVRNP
TPVLVEDGGRYYGFYGQKFGGRATITATAVGEESFPDTNGNGRFDAAEMDAFLNGTDVSGDSYDLADAFVDHNEDGIFNP
QQAGGQTGGENEELVDFDEDGQFDAADSKYNGVLCSVPAHAGCASVDAQSLFVRRSLVLVMSGSEAFATAADDVVIDDRD
GVSTGGSIDINGKSTASVVFAISDLHNQQMPAGTKVQFATSTGSIASTASYTWPSSNYNGARQFSVTVKGADQPESGVFS
VTVTTPGGTATEVLTVPVNIY

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 82060; Mature: 82060

Theoretical pI: Translated: 4.02; Mature: 4.02

Prosite motif: PS00013 PROKAR_LIPOPROTEIN ; PS51127 BIG1 ; PS00430 TONB_DEPENDENT_REC_1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
0.9 %Met     (Translated Protein)
1.7 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
0.9 %Met     (Mature Protein)
1.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKSAFKLWLATFLSFLLIACGGGGSISDTGGGDGGTPPTDTITVTAAITFSSSNSTIGID
CCHHHHHHHHHHHHHHEEEECCCCCCCCCCCCCCCCCCCCEEEEEEEEEEECCCCEEEEC
TPATVTANVKGSLSGAKAGKLVTFKLNNASLGTFTPSTGTALTDAEGNATITLSTADIAG
CCCEEEEEECCCCCCCCCCEEEEEEECCCEECEECCCCCCEEEECCCCEEEEEEECCCCC
AGTVTASVDTGESSDPVGFTMKGDGGSSTGGEAQVSLTLTDADGAPTDTISSTKPGKLVA
CCEEEEEECCCCCCCCEEEEEECCCCCCCCCCEEEEEEEECCCCCCCCCCCCCCCCEEEE
TVSGISKTVIVTFNSSLGDLPIKTAITDANGKASVDIYAGSQPGAAEATATLSTGESGQK
EECCCCEEEEEEECCCCCCCEEEEEEECCCCCEEEEEEECCCCCCCCEEEEEECCCCCCE
VFVIGASNVLMGTAEGDFVAGKASVSASAISAGGTATVSVKLQDDQGILFTEPVSVSFSS
EEEEECCCEEEECCCCCEEECCCCCCEEEECCCCEEEEEEEEECCCCEEEECCCEEEECC
TCATKGQAELSSPITAVGGIATSTYLAKGCVGDDNISVSADVGGKNLSATGTLNVLAADA
CCCCCCCHHHCCCCEECCCCHHHHHHHHCCCCCCCEEEEECCCCCEEECCEEEEEEEECC
GSIVFVGATPENISIKGTGGDESSTVKFKVLDTNGNPVANKAVSFTLNTSVGGLTLSPAT
CCEEEEECCCCCEEEEECCCCCCCEEEEEEEECCCCCCCCEEEEEEEECCCCCEEECCCC
ATTNSQGIAQTVVTSGAVATTVRVTASIDGTNPVISSQSSVLVISTGKPDQDSFSLSAEV
CCCCCCCCHHHHHCCCCEEEEEEEEEEECCCCCEECCCCCEEEEECCCCCCCCEEEEEEE
LNAEGWDIDGTEVKVTARLADAFNNPVPDGTAVYFTTEGGSIDPSCTTANGACTVVWRSQ
EECCCCCCCCCEEEEEEEEHHHHCCCCCCCEEEEEEECCCCCCCCCCCCCCEEEEEECCC
NARPGGVTLIDGSGAMVRNPTPVLVEDGGRYYGFYGQKFGGRATITATAVGEESFPDTNG
CCCCCCEEEECCCCCEEECCCEEEEECCCEEEEECCCCCCCEEEEEEEECCCCCCCCCCC
NGRFDAAEMDAFLNGTDVSGDSYDLADAFVDHNEDGIFNPQQAGGQTGGENEELVDFDED
CCEECHHHHHHEECCCCCCCCCCCHHHHHHCCCCCCCCCCHHHCCCCCCCCCEEEECCCC
GQFDAADSKYNGVLCSVPAHAGCASVDAQSLFVRRSLVLVMSGSEAFATAADDVVIDDRD
CCCCCCCCCCCCEEEECCCCCCCCCCCHHHHEEEEEEEEEEECCCCEEECCCCEEEECCC
GVSTGGSIDINGKSTASVVFAISDLHNQQMPAGTKVQFATSTGSIASTASYTWPSSNYNG
CCCCCCEEEECCCCCEEEEEEEEHHCCCCCCCCCEEEEEECCCCCCCCEEECCCCCCCCC
ARQFSVTVKGADQPESGVFSVTVTTPGGTATEVLTVPVNIY
EEEEEEEEECCCCCCCCEEEEEEECCCCCEEEEEEEEEEEC
>Mature Secondary Structure
MKSAFKLWLATFLSFLLIACGGGGSISDTGGGDGGTPPTDTITVTAAITFSSSNSTIGID
CCHHHHHHHHHHHHHHEEEECCCCCCCCCCCCCCCCCCCCEEEEEEEEEEECCCCEEEEC
TPATVTANVKGSLSGAKAGKLVTFKLNNASLGTFTPSTGTALTDAEGNATITLSTADIAG
CCCEEEEEECCCCCCCCCCEEEEEEECCCEECEECCCCCCEEEECCCCEEEEEEECCCCC
AGTVTASVDTGESSDPVGFTMKGDGGSSTGGEAQVSLTLTDADGAPTDTISSTKPGKLVA
CCEEEEEECCCCCCCCEEEEEECCCCCCCCCCEEEEEEEECCCCCCCCCCCCCCCCEEEE
TVSGISKTVIVTFNSSLGDLPIKTAITDANGKASVDIYAGSQPGAAEATATLSTGESGQK
EECCCCEEEEEEECCCCCCCEEEEEEECCCCCEEEEEEECCCCCCCCEEEEEECCCCCCE
VFVIGASNVLMGTAEGDFVAGKASVSASAISAGGTATVSVKLQDDQGILFTEPVSVSFSS
EEEEECCCEEEECCCCCEEECCCCCCEEEECCCCEEEEEEEEECCCCEEEECCCEEEECC
TCATKGQAELSSPITAVGGIATSTYLAKGCVGDDNISVSADVGGKNLSATGTLNVLAADA
CCCCCCCHHHCCCCEECCCCHHHHHHHHCCCCCCCEEEEECCCCCEEECCEEEEEEEECC
GSIVFVGATPENISIKGTGGDESSTVKFKVLDTNGNPVANKAVSFTLNTSVGGLTLSPAT
CCEEEEECCCCCEEEEECCCCCCCEEEEEEEECCCCCCCCEEEEEEEECCCCCEEECCCC
ATTNSQGIAQTVVTSGAVATTVRVTASIDGTNPVISSQSSVLVISTGKPDQDSFSLSAEV
CCCCCCCCHHHHHCCCCEEEEEEEEEEECCCCCEECCCCCEEEEECCCCCCCCEEEEEEE
LNAEGWDIDGTEVKVTARLADAFNNPVPDGTAVYFTTEGGSIDPSCTTANGACTVVWRSQ
EECCCCCCCCCEEEEEEEEHHHHCCCCCCCEEEEEEECCCCCCCCCCCCCCEEEEEECCC
NARPGGVTLIDGSGAMVRNPTPVLVEDGGRYYGFYGQKFGGRATITATAVGEESFPDTNG
CCCCCCEEEECCCCCEEECCCEEEEECCCEEEEECCCCCCCEEEEEEEECCCCCCCCCCC
NGRFDAAEMDAFLNGTDVSGDSYDLADAFVDHNEDGIFNPQQAGGQTGGENEELVDFDED
CCEECHHHHHHEECCCCCCCCCCCHHHHHHCCCCCCCCCCHHHCCCCCCCCCEEEECCCC
GQFDAADSKYNGVLCSVPAHAGCASVDAQSLFVRRSLVLVMSGSEAFATAADDVVIDDRD
CCCCCCCCCCCCEEEECCCCCCCCCCCHHHHEEEEEEEEEEECCCCEEECCCCEEEECCC
GVSTGGSIDINGKSTASVVFAISDLHNQQMPAGTKVQFATSTGSIASTASYTWPSSNYNG
CCCCCCEEEECCCCCEEEEEEEEHHCCCCCCCCCEEEEEECCCCCCCCEEECCCCCCCCC
ARQFSVTVKGADQPESGVFSVTVTTPGGTATEVLTVPVNIY
EEEEEEEEECCCCCCCCEEEEEEECCCCCEEEEEEEEEEEC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA