| Definition | Shewanella amazonensis SB2B chromosome, complete genome. |
|---|---|
| Accession | NC_008700 |
| Length | 4,306,142 |
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The map label for this gene is 119774191
Identifier: 119774191
GI number: 119774191
Start: 1276155
End: 1276328
Strand: Reverse
Name: 119774191
Synonym: Sama_1054
Alternate gene names: NA
Gene position: 1276328-1276155 (Counterclockwise)
Preceding gene: 119774192
Following gene: 119774182
Centisome position: 29.64
GC content: 48.85
Gene sequence:
>174_bases ATGACCAAGCTCTTTTTGTTTCCCATCATCCTTTGCCTGTTGTGGACGATTTTTTTACGCTTTAACGGCATTCCACTGGC CAAAGGCAAAACCGGTTACATCTATATCACCGCCATCAGCGGCACCCTGATTGTCCTGATGACGCTCCTGCTATGGCTGA CCCGGGTTCAGTAA
Upstream 100 bases:
>100_bases CACACGGAATGGCCTTTTTGTTTACCTTATCCGTAGTTTACCTTGGTAGGCAAAGCACCTACACTGACCCTAGTGACATC AATAATAACAAGCCGTTGCC
Downstream 100 bases:
>100_bases TAGCCTGCAATAAAAAAGCGCCCTCAGGCGCTTTTTTTATTGCATTGACCGCTACCCCAATACTGCGAGCAAGATACCGG CAGCCACCGCACTGCCGAGC
Product: membrane protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 57; Mature: 56
Protein sequence:
>57_residues MTKLFLFPIILCLLWTIFLRFNGIPLAKGKTGYIYITAISGTLIVLMTLLLWLTRVQ
Sequences:
>Translated_57_residues MTKLFLFPIILCLLWTIFLRFNGIPLAKGKTGYIYITAISGTLIVLMTLLLWLTRVQ >Mature_56_residues TKLFLFPIILCLLWTIFLRFNGIPLAKGKTGYIYITAISGTLIVLMTLLLWLTRVQ
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 6544; Mature: 6413
Theoretical pI: Translated: 10.72; Mature: 10.72
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.8 %Cys (Translated Protein) 3.5 %Met (Translated Protein) 5.3 %Cys+Met (Translated Protein) 1.8 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 3.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTKLFLFPIILCLLWTIFLRFNGIPLAKGKTGYIYITAISGTLIVLMTLLLWLTRVQ CCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEEEECCCHHHHHHHHHHHHHCCC >Mature Secondary Structure TKLFLFPIILCLLWTIFLRFNGIPLAKGKTGYIYITAISGTLIVLMTLLLWLTRVQ CHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEEEECCCHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA