Definition Shewanella amazonensis SB2B chromosome, complete genome.
Accession NC_008700
Length 4,306,142

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The map label for this gene is 119774191

Identifier: 119774191

GI number: 119774191

Start: 1276155

End: 1276328

Strand: Reverse

Name: 119774191

Synonym: Sama_1054

Alternate gene names: NA

Gene position: 1276328-1276155 (Counterclockwise)

Preceding gene: 119774192

Following gene: 119774182

Centisome position: 29.64

GC content: 48.85

Gene sequence:

>174_bases
ATGACCAAGCTCTTTTTGTTTCCCATCATCCTTTGCCTGTTGTGGACGATTTTTTTACGCTTTAACGGCATTCCACTGGC
CAAAGGCAAAACCGGTTACATCTATATCACCGCCATCAGCGGCACCCTGATTGTCCTGATGACGCTCCTGCTATGGCTGA
CCCGGGTTCAGTAA

Upstream 100 bases:

>100_bases
CACACGGAATGGCCTTTTTGTTTACCTTATCCGTAGTTTACCTTGGTAGGCAAAGCACCTACACTGACCCTAGTGACATC
AATAATAACAAGCCGTTGCC

Downstream 100 bases:

>100_bases
TAGCCTGCAATAAAAAAGCGCCCTCAGGCGCTTTTTTTATTGCATTGACCGCTACCCCAATACTGCGAGCAAGATACCGG
CAGCCACCGCACTGCCGAGC

Product: membrane protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 57; Mature: 56

Protein sequence:

>57_residues
MTKLFLFPIILCLLWTIFLRFNGIPLAKGKTGYIYITAISGTLIVLMTLLLWLTRVQ

Sequences:

>Translated_57_residues
MTKLFLFPIILCLLWTIFLRFNGIPLAKGKTGYIYITAISGTLIVLMTLLLWLTRVQ
>Mature_56_residues
TKLFLFPIILCLLWTIFLRFNGIPLAKGKTGYIYITAISGTLIVLMTLLLWLTRVQ

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 6544; Mature: 6413

Theoretical pI: Translated: 10.72; Mature: 10.72

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.8 %Cys     (Translated Protein)
3.5 %Met     (Translated Protein)
5.3 %Cys+Met (Translated Protein)
1.8 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
3.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTKLFLFPIILCLLWTIFLRFNGIPLAKGKTGYIYITAISGTLIVLMTLLLWLTRVQ
CCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEEEECCCHHHHHHHHHHHHHCCC
>Mature Secondary Structure 
TKLFLFPIILCLLWTIFLRFNGIPLAKGKTGYIYITAISGTLIVLMTLLLWLTRVQ
CHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEEEECCCHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA