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The map label for this gene is recN [H]

Identifier: 119774163

GI number: 119774163

Start: 1241013

End: 1242677

Strand: Reverse

Name: recN [H]

Synonym: Sama_1026

Alternate gene names: 119774163

Gene position: 1242677-1241013 (Counterclockwise)

Preceding gene: 119774164

Following gene: 119774162

Centisome position: 28.86

GC content: 55.5

Gene sequence:

>1665_bases
ATGCTTTGTCAGCTCAGCATCAATAACTTTGCCATTGTTCGCTTTCTGGAATTGGACTTCCGTCCGGGTATGACCAGTAT
TACCGGTGAAACCGGTGCCGGTAAGTCTATCGCCATCGATGCCCTGGGGCTGTGCCTGGGTAACCGCGCCGACGCCGGTG
CCGTGCGCCCCGGAGCCAGCAAAACCGAGGTCAGCGCCCGTTTCTCTCTGGATGATGTGCCACTGGCCCGGCGCTGGCTG
GAGGACAACGATCTCGAGCTGGACGACGAATGTATTCTCAGGCGTACCATCACTTCCGATGGCCGTTCACGGGCCTACAT
CAATGGCAATCCTGTCCCCCTCTCTCAGCTCAAATCCCTCGGGCAATATCTGGTGGGGATCCACGGCCAGCATGCACACC
ACGCTCTCTTAAAAAACGAACACCAACTGACGCTGCTGGATAGCTATGCCAATCACCGCATGCTGCAGGAGTCGGTCGCC
AGCGCCTATCAGCGCTGTCGTCAGATCGAAGCCGAATTAAGGCAGCTTGAGCAAAGCCAGCAGGAACGCATCGCCCGCAA
ACAGCTGCTGCAGTATCAGGTTGAAGAATTGGACGAATTCGCCCTGATGGAAGGAGAGTTTGAACAAATCGAGGCCGAAC
ACAAACGCCTCGCCAATGGCACCGCACTGATTGAAGATTGTCAGCACACCTTGTCGCTGCTCAGTGAATCCGACGAAGGC
AATATTGAGTCGCTGTTAAACCGAGCCTTATCCCTGGCCGCAACCCTGGAGTCGCTTGACCCTACCCTGGCCCCCATTGG
GAATATGCTCAATGACGCCCTTATTCAGGTGCAGGAAAGCAGCAGCGAACTTGGCCGTTACCTGTCCAATCTGGAGCTGG
ACCCGGAACATTTTGCCTATCTCGAAGAGCGACTCTCCAAAGCCATGACCCTGGCACGAAAACACCATGTTGCCGCCGAT
AAACTGGCTGCGCATCATCAGGAGCTTGCCAGGGAACTGGCCGGATTGGATTCCGATGAGGCGCAGCTGGATGAACTGAA
GCAACAGGTGCAAACCAGCAGGGAGGCTTATCTCAGTCACGCGCAGAAGCTCAGTCAAAGCCGTCTTCGCTATGCCAAAG
AACTGGATAAGCAGGTCACCGCCTCCATTCAGGAGCTCAACATGCCAAAAGGTAAGTTCACCATCGAGGTGAACTTCAAC
GACAAGGTGATGAGTGCAAACGGCAGTGACAGTGTGGAGTTTTTGGTTACCACCAACCCAGGCCAGCCCCTGTCGCCATT
GGCCAAGGTTGCCTCGGGCGGTGAACTGAGCCGCATTGGACTGGGTATTCAGGTGATCACCGCGAAAAAGGTCTCGACAC
CCACACTGATTTTTGACGAAGTGGATGTGGGGATTTCCGGCCCAACTGCGGCCGTGGTTGGCCGTATGCTCCGTGCCCTC
GGTGAGGCAACTCAGGTGTTTTGTGTCACCCACTTGCCCCAGGTTGCCGGTAATGGCCATCAACATATGTTTGTGAACAA
ATCCACTAAGGGTGGACAAACAGAAACCTCGATGAAGCCACTGGACAAAGACGCCCGGATACAGGAACTGGCTCGCTTGC
TGGGCGGCGATACCATTACCGAAAATACTCTCGCCAATGCCCGCGAGCTGCTGCAAGGAACGTAA

Upstream 100 bases:

>100_bases
TTTTCACGTCGGGCCTCTGGGATAATTTACTGTACAAAAAATCAGTATATACTGTGTATCAATACAGTACTTTGATTGCT
AATCACACAGGATTGCCGTC

Downstream 100 bases:

>100_bases
GCCAGGCTTTCCAACAAAATATTCAATTAATCAATTGGATAGACCTTAATCTCACCATAGTGTCACGCCCGGATGACAGC
GCGTTATCCGGGCAGATGCA

Product: recombination and repair protein

Products: NA

Alternate protein names: Recombination protein N [H]

Number of amino acids: Translated: 554; Mature: 554

Protein sequence:

>554_residues
MLCQLSINNFAIVRFLELDFRPGMTSITGETGAGKSIAIDALGLCLGNRADAGAVRPGASKTEVSARFSLDDVPLARRWL
EDNDLELDDECILRRTITSDGRSRAYINGNPVPLSQLKSLGQYLVGIHGQHAHHALLKNEHQLTLLDSYANHRMLQESVA
SAYQRCRQIEAELRQLEQSQQERIARKQLLQYQVEELDEFALMEGEFEQIEAEHKRLANGTALIEDCQHTLSLLSESDEG
NIESLLNRALSLAATLESLDPTLAPIGNMLNDALIQVQESSSELGRYLSNLELDPEHFAYLEERLSKAMTLARKHHVAAD
KLAAHHQELARELAGLDSDEAQLDELKQQVQTSREAYLSHAQKLSQSRLRYAKELDKQVTASIQELNMPKGKFTIEVNFN
DKVMSANGSDSVEFLVTTNPGQPLSPLAKVASGGELSRIGLGIQVITAKKVSTPTLIFDEVDVGISGPTAAVVGRMLRAL
GEATQVFCVTHLPQVAGNGHQHMFVNKSTKGGQTETSMKPLDKDARIQELARLLGGDTITENTLANARELLQGT

Sequences:

>Translated_554_residues
MLCQLSINNFAIVRFLELDFRPGMTSITGETGAGKSIAIDALGLCLGNRADAGAVRPGASKTEVSARFSLDDVPLARRWL
EDNDLELDDECILRRTITSDGRSRAYINGNPVPLSQLKSLGQYLVGIHGQHAHHALLKNEHQLTLLDSYANHRMLQESVA
SAYQRCRQIEAELRQLEQSQQERIARKQLLQYQVEELDEFALMEGEFEQIEAEHKRLANGTALIEDCQHTLSLLSESDEG
NIESLLNRALSLAATLESLDPTLAPIGNMLNDALIQVQESSSELGRYLSNLELDPEHFAYLEERLSKAMTLARKHHVAAD
KLAAHHQELARELAGLDSDEAQLDELKQQVQTSREAYLSHAQKLSQSRLRYAKELDKQVTASIQELNMPKGKFTIEVNFN
DKVMSANGSDSVEFLVTTNPGQPLSPLAKVASGGELSRIGLGIQVITAKKVSTPTLIFDEVDVGISGPTAAVVGRMLRAL
GEATQVFCVTHLPQVAGNGHQHMFVNKSTKGGQTETSMKPLDKDARIQELARLLGGDTITENTLANARELLQGT
>Mature_554_residues
MLCQLSINNFAIVRFLELDFRPGMTSITGETGAGKSIAIDALGLCLGNRADAGAVRPGASKTEVSARFSLDDVPLARRWL
EDNDLELDDECILRRTITSDGRSRAYINGNPVPLSQLKSLGQYLVGIHGQHAHHALLKNEHQLTLLDSYANHRMLQESVA
SAYQRCRQIEAELRQLEQSQQERIARKQLLQYQVEELDEFALMEGEFEQIEAEHKRLANGTALIEDCQHTLSLLSESDEG
NIESLLNRALSLAATLESLDPTLAPIGNMLNDALIQVQESSSELGRYLSNLELDPEHFAYLEERLSKAMTLARKHHVAAD
KLAAHHQELARELAGLDSDEAQLDELKQQVQTSREAYLSHAQKLSQSRLRYAKELDKQVTASIQELNMPKGKFTIEVNFN
DKVMSANGSDSVEFLVTTNPGQPLSPLAKVASGGELSRIGLGIQVITAKKVSTPTLIFDEVDVGISGPTAAVVGRMLRAL
GEATQVFCVTHLPQVAGNGHQHMFVNKSTKGGQTETSMKPLDKDARIQELARLLGGDTITENTLANARELLQGT

Specific function: May be involved in recombinational repair of damaged DNA [H]

COG id: COG0497

COG function: function code L; ATPase involved in DNA repair

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the recN family [H]

Homologues:

Organism=Escherichia coli, GI48994901, Length=551, Percent_Identity=56.442831215971, Blast_Score=608, Evalue=1e-175,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004604
- InterPro:   IPR003395 [H]

Pfam domain/function: PF02463 SMC_N [H]

EC number: NA

Molecular weight: Translated: 60895; Mature: 60895

Theoretical pI: Translated: 5.20; Mature: 5.20

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
3.1 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
3.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLCQLSINNFAIVRFLELDFRPGMTSITGETGAGKSIAIDALGLCLGNRADAGAVRPGAS
CEEEEECCCEEEEEEEEECCCCCCCCCCCCCCCCCEEHHHHHHHHHCCCCCCCCCCCCCC
KTEVSARFSLDDVPLARRWLEDNDLELDDECILRRTITSDGRSRAYINGNPVPLSQLKSL
CCCCEEEECCCCCHHHHHHCCCCCCCCCHHHHHHHHHCCCCCCEEEECCCCCCHHHHHHH
GQYLVGIHGQHAHHALLKNEHQLTLLDSYANHRMLQESVASAYQRCRQIEAELRQLEQSQ
HHHHHCCCCCHHHHHHHCCCCCEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
QERIARKQLLQYQVEELDEFALMEGEFEQIEAEHKRLANGTALIEDCQHTLSLLSESDEG
HHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCCCC
NIESLLNRALSLAATLESLDPTLAPIGNMLNDALIQVQESSSELGRYLSNLELDPEHFAY
CHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHH
LEERLSKAMTLARKHHVAADKLAAHHQELARELAGLDSDEAQLDELKQQVQTSREAYLSH
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHH
AQKLSQSRLRYAKELDKQVTASIQELNMPKGKFTIEVNFNDKVMSANGSDSVEFLVTTNP
HHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEECCCEEEECCCCCCEEEEEECCC
GQPLSPLAKVASGGELSRIGLGIQVITAKKVSTPTLIFDEVDVGISGPTAAVVGRMLRAL
CCCHHHHHHHHCCCCEEECCCCEEEEEECCCCCCEEEEECCCCCCCCCHHHHHHHHHHHH
GEATQVFCVTHLPQVAGNGHQHMFVNKSTKGGQTETSMKPLDKDARIQELARLLGGDTIT
HHHHHHHHHHHCHHHHCCCCCEEEEECCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCCC
ENTLANARELLQGT
HHHHHHHHHHHCCC
>Mature Secondary Structure
MLCQLSINNFAIVRFLELDFRPGMTSITGETGAGKSIAIDALGLCLGNRADAGAVRPGAS
CEEEEECCCEEEEEEEEECCCCCCCCCCCCCCCCCEEHHHHHHHHHCCCCCCCCCCCCCC
KTEVSARFSLDDVPLARRWLEDNDLELDDECILRRTITSDGRSRAYINGNPVPLSQLKSL
CCCCEEEECCCCCHHHHHHCCCCCCCCCHHHHHHHHHCCCCCCEEEECCCCCCHHHHHHH
GQYLVGIHGQHAHHALLKNEHQLTLLDSYANHRMLQESVASAYQRCRQIEAELRQLEQSQ
HHHHHCCCCCHHHHHHHCCCCCEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
QERIARKQLLQYQVEELDEFALMEGEFEQIEAEHKRLANGTALIEDCQHTLSLLSESDEG
HHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCCCC
NIESLLNRALSLAATLESLDPTLAPIGNMLNDALIQVQESSSELGRYLSNLELDPEHFAY
CHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHH
LEERLSKAMTLARKHHVAADKLAAHHQELARELAGLDSDEAQLDELKQQVQTSREAYLSH
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHH
AQKLSQSRLRYAKELDKQVTASIQELNMPKGKFTIEVNFNDKVMSANGSDSVEFLVTTNP
HHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEECCCEEEECCCCCCEEEEEECCC
GQPLSPLAKVASGGELSRIGLGIQVITAKKVSTPTLIFDEVDVGISGPTAAVVGRMLRAL
CCCHHHHHHHHCCCCEEECCCCEEEEEECCCCCCEEEEECCCCCCCCCHHHHHHHHHHHH
GEATQVFCVTHLPQVAGNGHQHMFVNKSTKGGQTETSMKPLDKDARIQELARLLGGDTIT
HHHHHHHHHHHCHHHHCCCCCEEEEECCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCCC
ENTLANARELLQGT
HHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA