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The map label for this gene is ybgC [C]

Identifier: 119774144

GI number: 119774144

Start: 1219262

End: 1219684

Strand: Reverse

Name: ybgC [C]

Synonym: Sama_1007

Alternate gene names: 119774144

Gene position: 1219684-1219262 (Counterclockwise)

Preceding gene: 119774145

Following gene: 119774141

Centisome position: 28.32

GC content: 52.01

Gene sequence:

>423_bases
ATGTCACAACCTGATTTCAGCCAAGCCAGATGCCACAGTTATCCGGTACAGATTTTTTACGAAGATACCGATTTCTCCGG
CGTGGTGTATCACGCCAACTTCATCAAGTACTTTGAGCGGGCCAGAGAGCAGGTAATAGGCGCAAATGAACTGCGTCGCC
TGTGGCTTGAGCAGGGATTGGGCTTTGCTGTGTATCGCTGTGACATGGTGTGCAACGAAGGCGTTGAATTCGCCGACATC
GTGGAGGTTAGAAGCCGGGTACTGATTGAAAGTAAGTACCGCACCCTGTGGCAGCAGGAAATCTGGCGCGAAGGAGGTTC
ACGTCCGGCTGTGAGCGGCTATATCGAAATGGTCTGTTTGAACCAGCAACGCCAACTCACCCCCATGCCAGCACAACTGA
TGGCAAGCTTACTGGAAGCTTAA

Upstream 100 bases:

>100_bases
ATACCACAGCCTGATTGCCGGTGTCACATCCGCCCCAGAGGGTTTGAGAAAAACTGCCGGCGGGGTAAACTGAGCCAGTT
TTTCACACTGCGAGCCCTTC

Downstream 100 bases:

>100_bases
TCAGGCACGTCTGGCAATGCCAAGCCGCCGCAGGTCCATTTCCAGCTCCAATGCCCGCATCGGCCTGGCGAAATATTGCC
CCTGAATATTATCGGCGCCC

Product: 4-hydroxybenzoyl-CoA thioesterase

Products: NA

Alternate protein names: L-Pal System-Associated Acyl-CoA Thioesterase; 4-Hydroxybenzoyl-CoA Thioesterase; Thioesterase Family Protein; Thioesterase Superfamily; Thioesterase; Pol-Pal System-Associated Acyl-CoA Thioesterase

Number of amino acids: Translated: 140; Mature: 139

Protein sequence:

>140_residues
MSQPDFSQARCHSYPVQIFYEDTDFSGVVYHANFIKYFERAREQVIGANELRRLWLEQGLGFAVYRCDMVCNEGVEFADI
VEVRSRVLIESKYRTLWQQEIWREGGSRPAVSGYIEMVCLNQQRQLTPMPAQLMASLLEA

Sequences:

>Translated_140_residues
MSQPDFSQARCHSYPVQIFYEDTDFSGVVYHANFIKYFERAREQVIGANELRRLWLEQGLGFAVYRCDMVCNEGVEFADI
VEVRSRVLIESKYRTLWQQEIWREGGSRPAVSGYIEMVCLNQQRQLTPMPAQLMASLLEA
>Mature_139_residues
SQPDFSQARCHSYPVQIFYEDTDFSGVVYHANFIKYFERAREQVIGANELRRLWLEQGLGFAVYRCDMVCNEGVEFADIV
EVRSRVLIESKYRTLWQQEIWREGGSRPAVSGYIEMVCLNQQRQLTPMPAQLMASLLEA

Specific function: Unknown

COG id: COG0824

COG function: function code R; Predicted thioesterase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 16309; Mature: 16178

Theoretical pI: Translated: 4.95; Mature: 4.95

Prosite motif: PS01328 4HBCOA_THIOESTERASE

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.9 %Cys     (Translated Protein)
3.6 %Met     (Translated Protein)
6.4 %Cys+Met (Translated Protein)
2.9 %Cys     (Mature Protein)
2.9 %Met     (Mature Protein)
5.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSQPDFSQARCHSYPVQIFYEDTDFSGVVYHANFIKYFERAREQVIGANELRRLWLEQGL
CCCCCCCHHHHCCCCEEEEEECCCCCCEEHHHHHHHHHHHHHHHHCCHHHHHHHHHHHCC
GFAVYRCDMVCNEGVEFADIVEVRSRVLIESKYRTLWQQEIWREGGSRPAVSGYIEMVCL
CEEHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHEEE
NQQRQLTPMPAQLMASLLEA
CCCCCCCCCCHHHHHHHHCC
>Mature Secondary Structure 
SQPDFSQARCHSYPVQIFYEDTDFSGVVYHANFIKYFERAREQVIGANELRRLWLEQGL
CCCCCCHHHHCCCCEEEEEECCCCCCEEHHHHHHHHHHHHHHHHCCHHHHHHHHHHHCC
GFAVYRCDMVCNEGVEFADIVEVRSRVLIESKYRTLWQQEIWREGGSRPAVSGYIEMVCL
CEEHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHEEE
NQQRQLTPMPAQLMASLLEA
CCCCCCCCCCHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA