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The map label for this gene is torD [H]

Identifier: 119774123

GI number: 119774123

Start: 1193315

End: 1194022

Strand: Reverse

Name: torD [H]

Synonym: Sama_0986

Alternate gene names: 119774123

Gene position: 1194022-1193315 (Counterclockwise)

Preceding gene: 119774124

Following gene: 119774121

Centisome position: 27.73

GC content: 58.19

Gene sequence:

>708_bases
ATGAACAAGATGTCTCATTCCGAAGAGTTCGCCGCAGGCGAAATGAATGCCATCCGCGCCTCAGTGTGGCAACTGCTAAG
CTCGCTCTACGCCAAAGAGCTGAGCCGTGAGCGCATCTGTGAGCTTGCTGGCGCCGAGCTGTGGCAGGCATTTGCAGCAC
AAGTCGAGCTTCAGGCGTCGGCTTCGCAAATCCAGGCGGCGCTCGCTCACGCAGCTAAGTATGACGCAAGTCAGGGCGGC
GATGACGCCCGCCTCGAACTTGCCGCCGACTTTTGCAGCGCCTTTTTGCAAAATGCCGAGCACTGCGCCGCGCCTTACGC
GAGCCTGTATCTGGGTGATGCTGGCAAAACTGAGCGGAATGAGACAGCGAGTTATGATACGGAGAGTCAGGATAAGGCCG
CCCGAAGCCTCTACGGTGAAAAACATCAGCTGATGAGTGATTACCTGCGCTCGGCGGGCCTTGGCCTTGATGCGGATTTT
CGCGAGCCAAGCGATCATCTGGCGGTGATCCTTGGGCTGATGGCGCACCTGTGCACCTCAGCAACTGAGGAGAGCCAGCG
GGCGTTCCTTGAAAGCGCCATCTTAAGCTGGCTGCCCGAGTTCAACGCAAGACTTGGCAAGCTCAAGCTTGAAAGTCCGC
TCTATGGCGCCCTTGGCGACTTTACCCTCGCCTGGGCCCGACTCGATACTGAGCTTTTGGGTGGTTAA

Upstream 100 bases:

>100_bases
AGGCCTGTGCGGCCTACACCTGTCTGGTGGACTTTGAGAAGTTCGAGGGCAAGGTGCCCGAGGTCAGCTCATTCACAGGC
CCTGTGGAGGTTAATCTGTC

Downstream 100 bases:

>100_bases
GAGGAAAAAACCGACTGGAAATTGGCAAAGGGGCTGACGGGCTTACCCCCAAGTAAGCCGCTTGCCATCAAACATTGAGC
TGAATCATTCGTTGGCCTTA

Product: chaperone protein TorD

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 235; Mature: 235

Protein sequence:

>235_residues
MNKMSHSEEFAAGEMNAIRASVWQLLSSLYAKELSRERICELAGAELWQAFAAQVELQASASQIQAALAHAAKYDASQGG
DDARLELAADFCSAFLQNAEHCAAPYASLYLGDAGKTERNETASYDTESQDKAARSLYGEKHQLMSDYLRSAGLGLDADF
REPSDHLAVILGLMAHLCTSATEESQRAFLESAILSWLPEFNARLGKLKLESPLYGALGDFTLAWARLDTELLGG

Sequences:

>Translated_235_residues
MNKMSHSEEFAAGEMNAIRASVWQLLSSLYAKELSRERICELAGAELWQAFAAQVELQASASQIQAALAHAAKYDASQGG
DDARLELAADFCSAFLQNAEHCAAPYASLYLGDAGKTERNETASYDTESQDKAARSLYGEKHQLMSDYLRSAGLGLDADF
REPSDHLAVILGLMAHLCTSATEESQRAFLESAILSWLPEFNARLGKLKLESPLYGALGDFTLAWARLDTELLGG
>Mature_235_residues
MNKMSHSEEFAAGEMNAIRASVWQLLSSLYAKELSRERICELAGAELWQAFAAQVELQASASQIQAALAHAAKYDASQGG
DDARLELAADFCSAFLQNAEHCAAPYASLYLGDAGKTERNETASYDTESQDKAARSLYGEKHQLMSDYLRSAGLGLDADF
REPSDHLAVILGLMAHLCTSATEESQRAFLESAILSWLPEFNARLGKLKLESPLYGALGDFTLAWARLDTELLGG

Specific function: Involved in the biogenesis of torA. Acts on torA before the insertion of the molybdenum cofactor and, as a result, probably favors a conformation of the apoenzyme that is competent for acquiring the cofactor [H]

COG id: COG3381

COG function: function code R; Uncharacterized component of anaerobic dehydrogenases

Gene ontology:

Cell location: Cytoplasm [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the torD/dmsD family. TorD subfamily [H]

Homologues:

Organism=Escherichia coli, GI1787232, Length=196, Percent_Identity=31.1224489795918, Blast_Score=79, Evalue=2e-16,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR023069
- InterPro:   IPR020945
- InterPro:   IPR009073 [H]

Pfam domain/function: PF02613 Nitrate_red_del [H]

EC number: NA

Molecular weight: Translated: 25561; Mature: 25561

Theoretical pI: Translated: 4.48; Mature: 4.48

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.7 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
3.8 %Cys+Met (Translated Protein)
1.7 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
3.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNKMSHSEEFAAGEMNAIRASVWQLLSSLYAKELSRERICELAGAELWQAFAAQVELQAS
CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
ASQIQAALAHAAKYDASQGGDDARLELAADFCSAFLQNAEHCAAPYASLYLGDAGKTERN
HHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHCHHHHHCCHHHHHCCCCCCCCCC
ETASYDTESQDKAARSLYGEKHQLMSDYLRSAGLGLDADFREPSDHLAVILGLMAHLCTS
CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHH
ATEESQRAFLESAILSWLPEFNARLGKLKLESPLYGALGDFTLAWARLDTELLGG
CHHHHHHHHHHHHHHHHHHHHHHHHCCEECCCCCHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MNKMSHSEEFAAGEMNAIRASVWQLLSSLYAKELSRERICELAGAELWQAFAAQVELQAS
CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
ASQIQAALAHAAKYDASQGGDDARLELAADFCSAFLQNAEHCAAPYASLYLGDAGKTERN
HHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHCHHHHHCCHHHHHCCCCCCCCCC
ETASYDTESQDKAARSLYGEKHQLMSDYLRSAGLGLDADFREPSDHLAVILGLMAHLCTS
CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHH
ATEESQRAFLESAILSWLPEFNARLGKLKLESPLYGALGDFTLAWARLDTELLGG
CHHHHHHHHHHHHHHHHHHHHHHHHCCEECCCCCHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA