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The map label for this gene is yhbY [H]

Identifier: 119774089

GI number: 119774089

Start: 1152075

End: 1152374

Strand: Reverse

Name: yhbY [H]

Synonym: Sama_0952

Alternate gene names: 119774089

Gene position: 1152374-1152075 (Counterclockwise)

Preceding gene: 119774102

Following gene: 119774077

Centisome position: 26.76

GC content: 52.67

Gene sequence:

>300_bases
ATGAATCTGACCACCAAACAAAAACAGCATCTCAAAGGACTGGCGCACGATTTAAAGCCGGTGGTGCTGCTCGGGGCCAA
TGGCCTGACCGAGGGAGTACTGGCTGAAATCGACGGAGCCCTGAGTCACCATGAACTTATCAAGGTGAAAGTGGCCAGCA
GCGATCGTGAAATGAAAAACGCCATCGTTGACGCCATTGTACGTGAAACCCAAGCCGCCAAGGTGCAGCTTATCGGTCAC
GTACTGGTGCTGTATCGCCAGTCCGAAGAACAAAAGATTGCCCTGCCAAAGGCGCGATAA

Upstream 100 bases:

>100_bases
TTAGCTGTCATTAAAAATCCGCGACAATGAGAGTTACACAAGGGCTATATAAGGGTAGAATACCCAACTTTCAACAGTAA
CTCAGCAAAAGTTGGTACAA

Downstream 100 bases:

>100_bases
TCTTTCGCTCTTTTTAATTAAGAGCATCAACAAAAAAGCCGCTAAATAGCGGCTTTTTTGTTTTGTCAGCACCGAAAGCA
ATCAGATGTATTGCACTTCC

Product: RNA-binding protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 99; Mature: 99

Protein sequence:

>99_residues
MNLTTKQKQHLKGLAHDLKPVVLLGANGLTEGVLAEIDGALSHHELIKVKVASSDREMKNAIVDAIVRETQAAKVQLIGH
VLVLYRQSEEQKIALPKAR

Sequences:

>Translated_99_residues
MNLTTKQKQHLKGLAHDLKPVVLLGANGLTEGVLAEIDGALSHHELIKVKVASSDREMKNAIVDAIVRETQAAKVQLIGH
VLVLYRQSEEQKIALPKAR
>Mature_99_residues
MNLTTKQKQHLKGLAHDLKPVVLLGANGLTEGVLAEIDGALSHHELIKVKVASSDREMKNAIVDAIVRETQAAKVQLIGH
VLVLYRQSEEQKIALPKAR

Specific function: Unknown

COG id: COG1534

COG function: function code J; Predicted RNA-binding protein containing KH domain, possibly ribosomal protein

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 CRM domain [H]

Homologues:

Organism=Escherichia coli, GI1789570, Length=97, Percent_Identity=74.2268041237113, Blast_Score=147, Evalue=1e-37,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001890
- InterPro:   IPR017924
- ProDom:   PD010559 [H]

Pfam domain/function: PF01985 CRS1_YhbY [H]

EC number: NA

Molecular weight: Translated: 10837; Mature: 10837

Theoretical pI: Translated: 10.06; Mature: 10.06

Prosite motif: PS01301 UPF0044

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
2.0 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
2.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNLTTKQKQHLKGLAHDLKPVVLLGANGLTEGVLAEIDGALSHHELIKVKVASSDREMKN
CCCCCHHHHHHHHHHHCCCCEEEECCCCCCHHHHHHHHCCCCCCEEEEEEECCCCHHHHH
AIVDAIVRETQAAKVQLIGHVLVLYRQSEEQKIALPKAR
HHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEECCCCCC
>Mature Secondary Structure
MNLTTKQKQHLKGLAHDLKPVVLLGANGLTEGVLAEIDGALSHHELIKVKVASSDREMKN
CCCCCHHHHHHHHHHHCCCCEEEECCCCCCHHHHHHHHCCCCCCEEEEEEECCCCHHHHH
AIVDAIVRETQAAKVQLIGHVLVLYRQSEEQKIALPKAR
HHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEECCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]