Definition Shewanella amazonensis SB2B chromosome, complete genome.
Accession NC_008700
Length 4,306,142

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The map label for this gene is 119773983

Identifier: 119773983

GI number: 119773983

Start: 1029743

End: 1032268

Strand: Reverse

Name: 119773983

Synonym: Sama_0846

Alternate gene names: NA

Gene position: 1032268-1029743 (Counterclockwise)

Preceding gene: 119773985

Following gene: 119773982

Centisome position: 23.97

GC content: 57.56

Gene sequence:

>2526_bases
ATGAAACTCTGCCCCCCGATACCAGCCCTCATAATAAGCAGTCTGCTCTCATTCCCACTCAGCCTGGCCAACCTTGCCCT
GGCCGGTGAACAAGTGGCGGGCTATCAGATACCGAGCTCGCCTCTCGCAGCCTTGGTTGAACAGGCCAAACAGAACAAGG
TGCTCTTGTCACCGGATGGCTTTTGGTTGTTAAGTTTAAGCCCACAGGGCGCCCCCACCGTCAAGCAACTCGCTCAGCCC
ATGATGCGTTTGGGAGGAACGGAAATCGACAGCCATGGTCATCTGCCGGGCAAATTACCCACCTTGTACGACGAGCTGAG
TCTGAGGCGCGCCAGTGACATGCAGCGTCAATCCATCCCGGGACTGAGCGCATTAATGCCGGTTATGGCGCCCAAATTCT
CCCCCGACGGTAAAACCCTGGCCTTGATAAGCCTCGCCACCGACCAGCCGAGATTACAACTGATTGAGCTGGCATCGGGT
AAGGTGCAGGAACAGGACTTAAGGCTCAATTTCAGTTTGGGGGTAAATTATCGCTGGCTGCCAGACAGCAGCGCCTTGCT
TCTGCCCCTTGTTGTCGGTGAGCATGGTCAGGCGCCCAGTTCGCAAAGCGCCATCCCTGGCATGCCCGCCATCAAAGAGA
GTCAACCCAATCAGGTGGCCAAACGTACCCACAGAAATTTGCTGAAAAACCCAGCCGATCACCAGGCCTTTGCACAGCAG
GTGTTAAGTCAGTTGGCTTTACTCTCTACAGAAGGTGAACTTCGTCCACTGGGAAGCCCCGTTTTTTTGCTGGATGCCGA
CGCTTCGCCCGACGGCCGCTTTATATTGGTTGAGCAGCTGACCGAACCCTTCTCAAACAGAGTCCCCTACCGCGGTTTTG
CCAAACGCTTCGAGGTTATGAGTCTGACAAGCGGTGATGCCCTTTACCGTGTCCGGGTACCCGGCAGCGATGCTGAGCGG
GATGATGCTGATATGCCCGGCCCTGCGCCAAGGCTGTTCCACTGGCAGGGCGAGGCCAACCTGGTGTGGGTCGAGGGACA
TCGCAGCGAGGCAAAACGTTCAAAGACGCAAGAAACTGACGCACCGGCAAACGACGCAGCAGTACATGAGAGCAGCGACG
CGCAAAAAGCTGAAGCCAGCTTCAGGGATACCCTCTATACCCTGAGTCCGCCTTTTACTGTGTCCGCTAAAGTACTGGGG
CAAACCCAGTGGCCCATCAGCGCCATCAATTGGCGCGATGATGGCAAGGCCTTGATAAGCCAAATCCGTCGCAGCAAGCA
ACTTATCAAAGTGAGCCTGCTAAGCCCCGCCACTGCCAATACCGCAACCGCCTGGCAGGACTGGTACCAGATAAGCAGCA
AAGATAAATATCAGGATCCGGGCACGCTGGTACGTGACCCTGTGACCCATCTGGTGGCGACCCGAAACGGTGCCATGTAT
CACTATGGCGATGGTCACTCAGATGACGGTATGCGCCCTTTTTTGGCCACCAGTAAGGCAGGAGAAGCCCGCAGCCTTCT
GTGGCAAAGTGCGCCATCGGCGTTCGAGCGGGTGGTGGCACTGGAGTCTCTCTCACCGCTTCAGTTGCTCGTGAGCCAGG
AAACACCATTGCAACCACCCCGGCTCTACCGGGTTTGGCCTGAAAGTGGTAAACGCGAACCCTTGATACCACTGGCAAAA
CGCCAACCCGCCCTCGAAGGCATACAGAAGGAGCATATTCAGTTCAGCCGCGCCGACGGCCAACCCTTGTCCGGCACCCT
CTATCTTCCGGCCAATTACCGCCACGGCGATGGTCCGCTGCCTGTGCTGATTTGGGCGTATCCGAGGGAGTATAAGAATG
CCGAGGTGGCCGCTCAGGTCGACTTTAATCCACTCTCTTACCCCAGACTGAGTCCGCTCAGTGCTCCAGCCATGGTAGCT
GCGGGATTCGCGGTGTTCGACAGGGTGTCGATGCCGATTATCGGTGTTGGTAAAAACAAGCCCAATGATACTTTTCTCGC
GCAACTGGTGGCCAATGCCGAGGCTGCCGTCAAAGTGCTGACTGACAGAGGCATAGCCGAACCCGGTCGCATCGCCGTTG
GCGGCCACTCCTACGGCGCCTTTATGGTGGCCAACCTGCTGGCACACACCGACCTTTTTGCAACCGGTATCGCCCGAAGC
GGCGCCTATAATCGCAGCCTCACGCCTTTTGGGTTCCAAAACGAGCGGCGCAATTACTGGGAGGCCCAGGCGCTGTATCA
GCAGATGTCACCCTTTAACGTGGCCGACAAGATAAACGAGCCGCTGCTGCTTATCCACGGTGAAGCGGATGCCAACTCCG
GCACCTACCCCATGCAGTCAAGCCGCCTGTTTGATGCAGTGTCCACCCTTGGCGGTCAGGCCCGTTTGGTGACCCTGCCC
TTTGAGGGCCACAGCTATCGCGCGCGGGAGTCCCAGTTGCATGTCCTGTGGGAACAGGAAGCCTGGCTTCGAAGCCATCT
GTCACCCAAAGAAACGACGGCCGCTGCGGCAGCTCAGCCCCTGTAG

Upstream 100 bases:

>100_bases
AAAATAGAGATAGAAACAAGCAATAATCGAGGCGCCTTTGATTGCTGCATCCGTCAACATTTTTTACAACCCGGTAATCA
ATCCGTCTGTGGGATCTTCC

Downstream 100 bases:

>100_bases
ATTGGGCCCGGTCAGGATGATTCCCGGGGAATGGCAAACCACAGCACTCTTTTTCCCCGGGTGAACAAATGTTACCATGC
GGCCACAATCGGGCCGTGCC

Product: hypothetical protein

Products: NA

Alternate protein names: Glutamyl Peptidase; Aminoacyl Peptidase; Peptidase S9A/B/C Family Catalytic Domain Protein; Exported Oligopeptidase; Prolyl Oligopeptidase; Serine Peptidase; Acylamino-Acid-Releasing; Peptidase S9C Family Protein; S9 Family Peptidase; Secreted Protein

Number of amino acids: Translated: 841; Mature: 841

Protein sequence:

>841_residues
MKLCPPIPALIISSLLSFPLSLANLALAGEQVAGYQIPSSPLAALVEQAKQNKVLLSPDGFWLLSLSPQGAPTVKQLAQP
MMRLGGTEIDSHGHLPGKLPTLYDELSLRRASDMQRQSIPGLSALMPVMAPKFSPDGKTLALISLATDQPRLQLIELASG
KVQEQDLRLNFSLGVNYRWLPDSSALLLPLVVGEHGQAPSSQSAIPGMPAIKESQPNQVAKRTHRNLLKNPADHQAFAQQ
VLSQLALLSTEGELRPLGSPVFLLDADASPDGRFILVEQLTEPFSNRVPYRGFAKRFEVMSLTSGDALYRVRVPGSDAER
DDADMPGPAPRLFHWQGEANLVWVEGHRSEAKRSKTQETDAPANDAAVHESSDAQKAEASFRDTLYTLSPPFTVSAKVLG
QTQWPISAINWRDDGKALISQIRRSKQLIKVSLLSPATANTATAWQDWYQISSKDKYQDPGTLVRDPVTHLVATRNGAMY
HYGDGHSDDGMRPFLATSKAGEARSLLWQSAPSAFERVVALESLSPLQLLVSQETPLQPPRLYRVWPESGKREPLIPLAK
RQPALEGIQKEHIQFSRADGQPLSGTLYLPANYRHGDGPLPVLIWAYPREYKNAEVAAQVDFNPLSYPRLSPLSAPAMVA
AGFAVFDRVSMPIIGVGKNKPNDTFLAQLVANAEAAVKVLTDRGIAEPGRIAVGGHSYGAFMVANLLAHTDLFATGIARS
GAYNRSLTPFGFQNERRNYWEAQALYQQMSPFNVADKINEPLLLIHGEADANSGTYPMQSSRLFDAVSTLGGQARLVTLP
FEGHSYRARESQLHVLWEQEAWLRSHLSPKETTAAAAAQPL

Sequences:

>Translated_841_residues
MKLCPPIPALIISSLLSFPLSLANLALAGEQVAGYQIPSSPLAALVEQAKQNKVLLSPDGFWLLSLSPQGAPTVKQLAQP
MMRLGGTEIDSHGHLPGKLPTLYDELSLRRASDMQRQSIPGLSALMPVMAPKFSPDGKTLALISLATDQPRLQLIELASG
KVQEQDLRLNFSLGVNYRWLPDSSALLLPLVVGEHGQAPSSQSAIPGMPAIKESQPNQVAKRTHRNLLKNPADHQAFAQQ
VLSQLALLSTEGELRPLGSPVFLLDADASPDGRFILVEQLTEPFSNRVPYRGFAKRFEVMSLTSGDALYRVRVPGSDAER
DDADMPGPAPRLFHWQGEANLVWVEGHRSEAKRSKTQETDAPANDAAVHESSDAQKAEASFRDTLYTLSPPFTVSAKVLG
QTQWPISAINWRDDGKALISQIRRSKQLIKVSLLSPATANTATAWQDWYQISSKDKYQDPGTLVRDPVTHLVATRNGAMY
HYGDGHSDDGMRPFLATSKAGEARSLLWQSAPSAFERVVALESLSPLQLLVSQETPLQPPRLYRVWPESGKREPLIPLAK
RQPALEGIQKEHIQFSRADGQPLSGTLYLPANYRHGDGPLPVLIWAYPREYKNAEVAAQVDFNPLSYPRLSPLSAPAMVA
AGFAVFDRVSMPIIGVGKNKPNDTFLAQLVANAEAAVKVLTDRGIAEPGRIAVGGHSYGAFMVANLLAHTDLFATGIARS
GAYNRSLTPFGFQNERRNYWEAQALYQQMSPFNVADKINEPLLLIHGEADANSGTYPMQSSRLFDAVSTLGGQARLVTLP
FEGHSYRARESQLHVLWEQEAWLRSHLSPKETTAAAAAQPL
>Mature_841_residues
MKLCPPIPALIISSLLSFPLSLANLALAGEQVAGYQIPSSPLAALVEQAKQNKVLLSPDGFWLLSLSPQGAPTVKQLAQP
MMRLGGTEIDSHGHLPGKLPTLYDELSLRRASDMQRQSIPGLSALMPVMAPKFSPDGKTLALISLATDQPRLQLIELASG
KVQEQDLRLNFSLGVNYRWLPDSSALLLPLVVGEHGQAPSSQSAIPGMPAIKESQPNQVAKRTHRNLLKNPADHQAFAQQ
VLSQLALLSTEGELRPLGSPVFLLDADASPDGRFILVEQLTEPFSNRVPYRGFAKRFEVMSLTSGDALYRVRVPGSDAER
DDADMPGPAPRLFHWQGEANLVWVEGHRSEAKRSKTQETDAPANDAAVHESSDAQKAEASFRDTLYTLSPPFTVSAKVLG
QTQWPISAINWRDDGKALISQIRRSKQLIKVSLLSPATANTATAWQDWYQISSKDKYQDPGTLVRDPVTHLVATRNGAMY
HYGDGHSDDGMRPFLATSKAGEARSLLWQSAPSAFERVVALESLSPLQLLVSQETPLQPPRLYRVWPESGKREPLIPLAK
RQPALEGIQKEHIQFSRADGQPLSGTLYLPANYRHGDGPLPVLIWAYPREYKNAEVAAQVDFNPLSYPRLSPLSAPAMVA
AGFAVFDRVSMPIIGVGKNKPNDTFLAQLVANAEAAVKVLTDRGIAEPGRIAVGGHSYGAFMVANLLAHTDLFATGIARS
GAYNRSLTPFGFQNERRNYWEAQALYQQMSPFNVADKINEPLLLIHGEADANSGTYPMQSSRLFDAVSTLGGQARLVTLP
FEGHSYRARESQLHVLWEQEAWLRSHLSPKETTAAAAAQPL

Specific function: Unknown

COG id: COG1506

COG function: function code E; Dipeptidyl aminopeptidases/acylaminoacyl-peptidases

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 91919; Mature: 91919

Theoretical pI: Translated: 7.63; Mature: 7.63

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.1 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
2.0 %Cys+Met (Translated Protein)
0.1 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
2.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKLCPPIPALIISSLLSFPLSLANLALAGEQVAGYQIPSSPLAALVEQAKQNKVLLSPDG
CCCCCCCHHHHHHHHHHHHHHHHHHHHCCCHHCCCCCCCHHHHHHHHHHHCCCEEECCCC
FWLLSLSPQGAPTVKQLAQPMMRLGGTEIDSHGHLPGKLPTLYDELSLRRASDMQRQSIP
EEEEEECCCCCHHHHHHHHHHHHHCCCEECCCCCCCCCCCHHHHHHHHHHHHHHHHHCCC
GLSALMPVMAPKFSPDGKTLALISLATDQPRLQLIELASGKVQEQDLRLNFSLGVNYRWL
CHHHHHHHHCCCCCCCCCEEEEEEEECCCCCEEEEECCCCCCCCCCEEEEEEECCEEEEC
PDSSALLLPLVVGEHGQAPSSQSAIPGMPAIKESQPNQVAKRTHRNLLKNPADHQAFAQQ
CCCCCEEEEEEECCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCHHHHHHH
VLSQLALLSTEGELRPLGSPVFLLDADASPDGRFILVEQLTEPFSNRVPYRGFAKRFEVM
HHHHHHHHCCCCCCCCCCCEEEEEECCCCCCCCEEEHHHHHHHHHCCCCCHHHHHHEEEE
SLTSGDALYRVRVPGSDAERDDADMPGPAPRLFHWQGEANLVWVEGHRSEAKRSKTQETD
EECCCCEEEEEECCCCCCCCCCCCCCCCCCCEEEECCCCEEEEEECCHHHHHHHHCCCCC
APANDAAVHESSDAQKAEASFRDTLYTLSPPFTVSAKVLGQTQWPISAINWRDDGKALIS
CCCCCCCCCCCCCHHHHHHHHHHEEEECCCCCEEEHHEECCCCCCCEEECCCCCHHHHHH
QIRRSKQLIKVSLLSPATANTATAWQDWYQISSKDKYQDPGTLVRDPVTHLVATRNGAMY
HHHHHHHEEEEEEECCCCCCCHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHCCCCCCEE
HYGDGHSDDGMRPFLATSKAGEARSLLWQSAPSAFERVVALESLSPLQLLVSQETPLQPP
ECCCCCCCCCCCCEEECCCCCHHHHHHHHCCHHHHHHHHHHHCCCHHHHEECCCCCCCCC
RLYRVWPESGKREPLIPLAKRQPALEGIQKEHIQFSRADGQPLSGTLYLPANYRHGDGPL
CEEEECCCCCCCCCCCCCHHCCHHHHHHHHHHHEEECCCCCCCCEEEEECCCCCCCCCCC
PVLIWAYPREYKNAEVAAQVDFNPLSYPRLSPLSAPAMVAAGFAVFDRVSMPIIGVGKNK
EEEEEECCCCCCCCEEEEEECCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCEEECCCCC
PNDTFLAQLVANAEAAVKVLTDRGIAEPGRIAVGGHSYGAFMVANLLAHTDLFATGIARS
CCHHHHHHHHHCHHHHHHHHHCCCCCCCCCEEECCCCHHHHHHHHHHHHHHHHHHHHHHC
GAYNRSLTPFGFQNERRNYWEAQALYQQMSPFNVADKINEPLLLIHGEADANSGTYPMQS
CCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCHHHHCCCCEEEEECCCCCCCCCCCCCH
SRLFDAVSTLGGQARLVTLPFEGHSYRARESQLHVLWEQEAWLRSHLSPKETTAAAAAQP
HHHHHHHHHCCCCEEEEEEECCCCCCCCCCCCEEEEECHHHHHHHCCCCHHHHHHHHCCC
L
C
>Mature Secondary Structure
MKLCPPIPALIISSLLSFPLSLANLALAGEQVAGYQIPSSPLAALVEQAKQNKVLLSPDG
CCCCCCCHHHHHHHHHHHHHHHHHHHHCCCHHCCCCCCCHHHHHHHHHHHCCCEEECCCC
FWLLSLSPQGAPTVKQLAQPMMRLGGTEIDSHGHLPGKLPTLYDELSLRRASDMQRQSIP
EEEEEECCCCCHHHHHHHHHHHHHCCCEECCCCCCCCCCCHHHHHHHHHHHHHHHHHCCC
GLSALMPVMAPKFSPDGKTLALISLATDQPRLQLIELASGKVQEQDLRLNFSLGVNYRWL
CHHHHHHHHCCCCCCCCCEEEEEEEECCCCCEEEEECCCCCCCCCCEEEEEEECCEEEEC
PDSSALLLPLVVGEHGQAPSSQSAIPGMPAIKESQPNQVAKRTHRNLLKNPADHQAFAQQ
CCCCCEEEEEEECCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCHHHHHHH
VLSQLALLSTEGELRPLGSPVFLLDADASPDGRFILVEQLTEPFSNRVPYRGFAKRFEVM
HHHHHHHHCCCCCCCCCCCEEEEEECCCCCCCCEEEHHHHHHHHHCCCCCHHHHHHEEEE
SLTSGDALYRVRVPGSDAERDDADMPGPAPRLFHWQGEANLVWVEGHRSEAKRSKTQETD
EECCCCEEEEEECCCCCCCCCCCCCCCCCCCEEEECCCCEEEEEECCHHHHHHHHCCCCC
APANDAAVHESSDAQKAEASFRDTLYTLSPPFTVSAKVLGQTQWPISAINWRDDGKALIS
CCCCCCCCCCCCCHHHHHHHHHHEEEECCCCCEEEHHEECCCCCCCEEECCCCCHHHHHH
QIRRSKQLIKVSLLSPATANTATAWQDWYQISSKDKYQDPGTLVRDPVTHLVATRNGAMY
HHHHHHHEEEEEEECCCCCCCHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHCCCCCCEE
HYGDGHSDDGMRPFLATSKAGEARSLLWQSAPSAFERVVALESLSPLQLLVSQETPLQPP
ECCCCCCCCCCCCEEECCCCCHHHHHHHHCCHHHHHHHHHHHCCCHHHHEECCCCCCCCC
RLYRVWPESGKREPLIPLAKRQPALEGIQKEHIQFSRADGQPLSGTLYLPANYRHGDGPL
CEEEECCCCCCCCCCCCCHHCCHHHHHHHHHHHEEECCCCCCCCEEEEECCCCCCCCCCC
PVLIWAYPREYKNAEVAAQVDFNPLSYPRLSPLSAPAMVAAGFAVFDRVSMPIIGVGKNK
EEEEEECCCCCCCCEEEEEECCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCEEECCCCC
PNDTFLAQLVANAEAAVKVLTDRGIAEPGRIAVGGHSYGAFMVANLLAHTDLFATGIARS
CCHHHHHHHHHCHHHHHHHHHCCCCCCCCCEEECCCCHHHHHHHHHHHHHHHHHHHHHHC
GAYNRSLTPFGFQNERRNYWEAQALYQQMSPFNVADKINEPLLLIHGEADANSGTYPMQS
CCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCHHHHCCCCEEEEECCCCCCCCCCCCCH
SRLFDAVSTLGGQARLVTLPFEGHSYRARESQLHVLWEQEAWLRSHLSPKETTAAAAAQP
HHHHHHHHHCCCCEEEEEEECCCCCCCCCCCCEEEEECHHHHHHHCCCCHHHHHHHHCCC
L
C

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA