Definition Shewanella amazonensis SB2B chromosome, complete genome.
Accession NC_008700
Length 4,306,142

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The map label for this gene is 119773875

Identifier: 119773875

GI number: 119773875

Start: 904781

End: 906094

Strand: Reverse

Name: 119773875

Synonym: Sama_0737

Alternate gene names: NA

Gene position: 906094-904781 (Counterclockwise)

Preceding gene: 119773879

Following gene: 119773872

Centisome position: 21.04

GC content: 54.79

Gene sequence:

>1314_bases
ATGACATCAGGAATTCAGACAAGCTTTCAGCAAAGTCGGCCTCGCAGCCTGCTCCTTGGTCTGTGGCTGGCGATTGCCGC
CCCAATAGTGTGTGCACAGACAGAGACATCCGCCGCCGATAATCTTCCCATCGCCGCCAACGCCACTGCGCTGAGCTACG
GCACTGCGTATCAGGCCCCTTCCCGTCATTTTGGTGAAGACAGACGCTTCATGGTAGCGCTGCCGGAGCGCTATCACGCC
GGTGAACGCCGCTATCCGGTGCTTTATGTCATCGATGGCGACTTTCAGTTTCGCCATGTCTCAGCCGCAGTGAATAACCT
CAGTCGCATGGGCAAAATCCCCCCCATGATAGTGGTGGGTGTGGCAACCCAGGGACAGGCAGACTATATCAAATCCACCA
CCTGGGCCTCCGAGCGGGAAGGTGATGAGTTTGGCGGCGCCGACACCCTGATGGCCTACCTGAAAGATGAACTCTTGCCC
CTGATTGACGGGAAGTTTCGCACCAGCGGCAAAAATGCCATCGCGGGCTATTCTCTGGGCGGCCTCTTTACCCTCGAGGC
CATGATGGCCGATGACACGCCCTTTTCCGCTTTTTTGGCCATGAGCCCCAGCGCCTGGTACGACGATTACGGTATCAACG
ACCGCATGGCGGCTTACATCAAAAAGCACAGGACAATGCCACCGCTGTTTTTATCGGTCGCCAACGAAGAGGGCATGGGC
GTGCAGCCGCTGTTCAAGCTGATTGAAACGTCGATGCCAAACTCCGGAGTGGTATTTAAGCACTACCCGGATGAAACCCA
CTACACCACCGCCATGCCTGCGCTTTTGGATGCCCTGGCGTATCTGGCCCCGGCCTACTACACCGACCTGGACGTGCTGC
TGCCAATGGCCAACTACCAGGATGTGTTAAACCATTTCGAAGCCAAAGGCAGCCAATGGGCCGGATTTCGCTTCGAGTGG
TTACAGTCCTACTACCTTGCCAAATATTTTTTCATTACCAAACAGCAAGATAAAATAGAATCCTTCCTCGATGATGCACA
AAAACGCTTCCCCGAATCCAACACAGAACTGTGCGTTGCCATGGCCAAAGCCTATTTGAAAAATCAGCAACCAAAGAATG
CGGTAAACGTGCTGATGCGCGCTGAAAAGGAAGGCCAGCAAAGCGCCGATTGGCTGGCACAAATGAGCGAAGCCCAAAAA
GCCATGGGCGCCATAAAAGAAGCCGAGGCCCTCCACAGCCGTGCAATGGCGCTGGCGAAAGCACAGGGGCTCGAAAGCTG
GGAATATTGGGAACTTAACCCGAGACGTTTTTAA

Upstream 100 bases:

>100_bases
TCTATTACAAGGCGAAAAAGCCTGCATTCTTCACTTTTGCAGCCAACTCTGTCAGGGTTAAAGACGGGAAAAACAATGCT
AAAAATAACAGGGACCTCAG

Downstream 100 bases:

>100_bases
CTTCCAGCAGGGCCAAAGGGCGAAATGAGCATCAAAAAAGGCGCCTGTGGCGCCTTTCTCATTAAGCTTAACGGCTGACC
CTGACCTCAGGGGAGTTCAT

Product: putative esterase

Products: NA

Alternate protein names: Alpha/Beta Superfamily Hydrolase; IroE Protein; Tetratricopeptide Tpr_1 Repeat-Containing Protein; Alpha/Beta Fold Family Hydrolase; Ferric-Enterobactin Hydrolase; TPR Repeat-Containing Protein; Iron-Chelator Esterase; Exported Esterase; Esterase Family Protein

Number of amino acids: Translated: 437; Mature: 436

Protein sequence:

>437_residues
MTSGIQTSFQQSRPRSLLLGLWLAIAAPIVCAQTETSAADNLPIAANATALSYGTAYQAPSRHFGEDRRFMVALPERYHA
GERRYPVLYVIDGDFQFRHVSAAVNNLSRMGKIPPMIVVGVATQGQADYIKSTTWASEREGDEFGGADTLMAYLKDELLP
LIDGKFRTSGKNAIAGYSLGGLFTLEAMMADDTPFSAFLAMSPSAWYDDYGINDRMAAYIKKHRTMPPLFLSVANEEGMG
VQPLFKLIETSMPNSGVVFKHYPDETHYTTAMPALLDALAYLAPAYYTDLDVLLPMANYQDVLNHFEAKGSQWAGFRFEW
LQSYYLAKYFFITKQQDKIESFLDDAQKRFPESNTELCVAMAKAYLKNQQPKNAVNVLMRAEKEGQQSADWLAQMSEAQK
AMGAIKEAEALHSRAMALAKAQGLESWEYWELNPRRF

Sequences:

>Translated_437_residues
MTSGIQTSFQQSRPRSLLLGLWLAIAAPIVCAQTETSAADNLPIAANATALSYGTAYQAPSRHFGEDRRFMVALPERYHA
GERRYPVLYVIDGDFQFRHVSAAVNNLSRMGKIPPMIVVGVATQGQADYIKSTTWASEREGDEFGGADTLMAYLKDELLP
LIDGKFRTSGKNAIAGYSLGGLFTLEAMMADDTPFSAFLAMSPSAWYDDYGINDRMAAYIKKHRTMPPLFLSVANEEGMG
VQPLFKLIETSMPNSGVVFKHYPDETHYTTAMPALLDALAYLAPAYYTDLDVLLPMANYQDVLNHFEAKGSQWAGFRFEW
LQSYYLAKYFFITKQQDKIESFLDDAQKRFPESNTELCVAMAKAYLKNQQPKNAVNVLMRAEKEGQQSADWLAQMSEAQK
AMGAIKEAEALHSRAMALAKAQGLESWEYWELNPRRF
>Mature_436_residues
TSGIQTSFQQSRPRSLLLGLWLAIAAPIVCAQTETSAADNLPIAANATALSYGTAYQAPSRHFGEDRRFMVALPERYHAG
ERRYPVLYVIDGDFQFRHVSAAVNNLSRMGKIPPMIVVGVATQGQADYIKSTTWASEREGDEFGGADTLMAYLKDELLPL
IDGKFRTSGKNAIAGYSLGGLFTLEAMMADDTPFSAFLAMSPSAWYDDYGINDRMAAYIKKHRTMPPLFLSVANEEGMGV
QPLFKLIETSMPNSGVVFKHYPDETHYTTAMPALLDALAYLAPAYYTDLDVLLPMANYQDVLNHFEAKGSQWAGFRFEWL
QSYYLAKYFFITKQQDKIESFLDDAQKRFPESNTELCVAMAKAYLKNQQPKNAVNVLMRAEKEGQQSADWLAQMSEAQKA
MGAIKEAEALHSRAMALAKAQGLESWEYWELNPRRF

Specific function: Unknown

COG id: COG2819

COG function: function code R; Predicted hydrolase of the alpha/beta superfamily

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 48899; Mature: 48768

Theoretical pI: Translated: 5.68; Mature: 5.68

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
4.3 %Met     (Translated Protein)
4.8 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
4.1 %Met     (Mature Protein)
4.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTSGIQTSFQQSRPRSLLLGLWLAIAAPIVCAQTETSAADNLPIAANATALSYGTAYQAP
CCCCCCCHHHHCCCHHHHHHHHHHHHCCEEEECCCCCCCCCCCEECCCCEEECCCCCCCC
SRHFGEDRRFMVALPERYHAGERRYPVLYVIDGDFQFRHVSAAVNNLSRMGKIPPMIVVG
CHHCCCCCEEEEECCHHHCCCCCCCCEEEEECCCCEEHHHHHHHHHHHHHCCCCCEEEEE
VATQGQADYIKSTTWASEREGDEFGGADTLMAYLKDELLPLIDGKFRTSGKNAIAGYSLG
ECCCCCHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCC
GLFTLEAMMADDTPFSAFLAMSPSAWYDDYGINDRMAAYIKKHRTMPPLFLSVANEEGMG
HHHHHHHHHCCCCCHHHHEEECCCCCCCCCCCCHHHHHHHHHHCCCCCCEEEECCCCCCC
VQPLFKLIETSMPNSGVVFKHYPDETHYTTAMPALLDALAYLAPAYYTDLDVLLPMANYQ
HHHHHHHHHHCCCCCCEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHCCHHHHHCCCCHH
DVLNHFEAKGSQWAGFRFEWLQSYYLAKYFFITKQQDKIESFLDDAQKRFPESNTELCVA
HHHHHHHHCCCCCCCHHHHHHHHHHHHHHHEEECCHHHHHHHHHHHHHHCCCCCHHHHHH
MAKAYLKNQQPKNAVNVLMRAEKEGQQSADWLAQMSEAQKAMGAIKEAEALHSRAMALAK
HHHHHHCCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
AQGLESWEYWELNPRRF
HHCCCCCCEECCCCCCC
>Mature Secondary Structure 
TSGIQTSFQQSRPRSLLLGLWLAIAAPIVCAQTETSAADNLPIAANATALSYGTAYQAP
CCCCCCHHHHCCCHHHHHHHHHHHHCCEEEECCCCCCCCCCCEECCCCEEECCCCCCCC
SRHFGEDRRFMVALPERYHAGERRYPVLYVIDGDFQFRHVSAAVNNLSRMGKIPPMIVVG
CHHCCCCCEEEEECCHHHCCCCCCCCEEEEECCCCEEHHHHHHHHHHHHHCCCCCEEEEE
VATQGQADYIKSTTWASEREGDEFGGADTLMAYLKDELLPLIDGKFRTSGKNAIAGYSLG
ECCCCCHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCC
GLFTLEAMMADDTPFSAFLAMSPSAWYDDYGINDRMAAYIKKHRTMPPLFLSVANEEGMG
HHHHHHHHHCCCCCHHHHEEECCCCCCCCCCCCHHHHHHHHHHCCCCCCEEEECCCCCCC
VQPLFKLIETSMPNSGVVFKHYPDETHYTTAMPALLDALAYLAPAYYTDLDVLLPMANYQ
HHHHHHHHHHCCCCCCEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHCCHHHHHCCCCHH
DVLNHFEAKGSQWAGFRFEWLQSYYLAKYFFITKQQDKIESFLDDAQKRFPESNTELCVA
HHHHHHHHCCCCCCCHHHHHHHHHHHHHHHEEECCHHHHHHHHHHHHHHCCCCCHHHHHH
MAKAYLKNQQPKNAVNVLMRAEKEGQQSADWLAQMSEAQKAMGAIKEAEALHSRAMALAK
HHHHHHCCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
AQGLESWEYWELNPRRF
HHCCCCCCEECCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA