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The map label for this gene is pqqL [C]

Identifier: 119773862

GI number: 119773862

Start: 888905

End: 890341

Strand: Reverse

Name: pqqL [C]

Synonym: Sama_0724

Alternate gene names: 119773862

Gene position: 890341-888905 (Counterclockwise)

Preceding gene: 119773864

Following gene: 119773861

Centisome position: 20.68

GC content: 58.66

Gene sequence:

>1437_bases
ATGGGATTGCTGGCAGTACTTGGCCTGACGATGATGACACTCGCGCCCCTTTCCGAATGCCAGTTCGATGACCAGCCGTT
AAGGCGTCTGGATGACGCCGTTGTGACAAGGCAGCTTGATAATGGTATCCGACTGTTTTGGCTTCCAAAGGCAGGCAAAC
AAAGCATCACCCTGGCGAGCCGCTTTGCCGTAGGCTCTCGCCACGAGGCTTTGAGACAAACCGGCTGGGCACATTTGTTT
GAGCATCTGCTTTTCAAGGGCAGTCGCCAGGCCCCCGGCGATGGTTACAGCCAGCTGATGAACGCCATGGGAGCCAGTTT
TAATGCCAGCACCCTGTTCGATGACACCCGCTACTACACCCGAATCCCCGCTCAGGGGCTGGCCTTTACCCTGGCGCTGG
AGCGGGACCGCTTTGAGCATCCGCAATTTGCCGTCGAGGCTATTACCAATCAGCAAAAAACCGTGCTGGCCGAAATGGCA
CAAACCATAGATAACCAACCCTACTTTCGTGCGGCGATGACCTTTTTGCTGAGCCAGGCGACGGATACACCTTACCGTCA
CGCCATTATCGGCAGTCGCGCCGACATCCTCGGTGCCGATGCTGACAGCCTTAGGGCTTTTCATCGGCGCTTTTATCGGC
CATCGCGTCTGAGTATGGCGCTCATCGGTGCCCTGCCCGGGGATGTTGAAACCCAGATCAGGGGCCAATTTGGCACCTGG
CATGAGCCGGCACAGCCACCCGAAACAGCAGGGTTCAACCAAGCGGCAGTTCCTGATGACGCAGCGAAGCCAGATTTCAC
TCTGCGCGCACCCGTACATGGCGAAGTCATAGATGAACGAGCCCCCTGGCCCGGGCTGCTGATGGCCTGGCACACGGTGG
GGCGCAGTCACCGGGATGCCGCCGCCATCAAGCTGCTGGAGCTCAGGCTGTTTCAGCGTATCGCCAGTGGTCTCGAGCGA
GCTGGCATCAGTGGCAAGCAGAGCCTGCTGCACTATTCTCTGCCGCTGGAAATGGAGCACCATGGCATGACCAATCTGGT
ACTGGTGCCCCGGGCCAATGTGAGCCTGGATACCCTGGCTGCGGGTATCGAAAAGCTGATAGACCAGGCTGCCCGAGAGC
CCATGAAAAACACAGCGCTTTGCCAACTGAAACAGCTCTGGCTCGCCGACTACCAGGAGCAGCTCAGCCGTGATGAAACC
CTGGCGCAGTGGCTCGCCGCAAGCCCTGCCACGGATAATGCACAGCCTCTGCTCAGCCCTTGGATCAGGATACGGGATGT
CAGTGAGGACGACTTGATGCGGGTGGCGCAGCGCTATTTTGCAGGCCACAGCGTCCGGCTCGATTTAAAACCGGCATGGC
ACACCCGGCTTGGAAAAGGTCTGCTGGAATGGCTCCCCGAAAGCTGGGCCGAAGGCCTTGAGGAACTTGCATTATGA

Upstream 100 bases:

>100_bases
GGCATCCTTGGCTTAATAACAAGTAGGTTGAAAGCTCTTGCCATCATATCAGTAATGATGAAAAACTGAATGCCATTCCA
AAGGCTTGGGGAAGATATTC

Downstream 100 bases:

>100_bases
GCGCCAGAAGACACCTGCTTTTGGCCGTGCTGGGCTCAGGCTTGCTGGCTGGCTGCCAACATAAGGCGCTGGAGTACGAA
CCCATCGCGCCTCCGGTCCT

Product: Zn-dependent peptidase-like protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 478; Mature: 477

Protein sequence:

>478_residues
MGLLAVLGLTMMTLAPLSECQFDDQPLRRLDDAVVTRQLDNGIRLFWLPKAGKQSITLASRFAVGSRHEALRQTGWAHLF
EHLLFKGSRQAPGDGYSQLMNAMGASFNASTLFDDTRYYTRIPAQGLAFTLALERDRFEHPQFAVEAITNQQKTVLAEMA
QTIDNQPYFRAAMTFLLSQATDTPYRHAIIGSRADILGADADSLRAFHRRFYRPSRLSMALIGALPGDVETQIRGQFGTW
HEPAQPPETAGFNQAAVPDDAAKPDFTLRAPVHGEVIDERAPWPGLLMAWHTVGRSHRDAAAIKLLELRLFQRIASGLER
AGISGKQSLLHYSLPLEMEHHGMTNLVLVPRANVSLDTLAAGIEKLIDQAAREPMKNTALCQLKQLWLADYQEQLSRDET
LAQWLAASPATDNAQPLLSPWIRIRDVSEDDLMRVAQRYFAGHSVRLDLKPAWHTRLGKGLLEWLPESWAEGLEELAL

Sequences:

>Translated_478_residues
MGLLAVLGLTMMTLAPLSECQFDDQPLRRLDDAVVTRQLDNGIRLFWLPKAGKQSITLASRFAVGSRHEALRQTGWAHLF
EHLLFKGSRQAPGDGYSQLMNAMGASFNASTLFDDTRYYTRIPAQGLAFTLALERDRFEHPQFAVEAITNQQKTVLAEMA
QTIDNQPYFRAAMTFLLSQATDTPYRHAIIGSRADILGADADSLRAFHRRFYRPSRLSMALIGALPGDVETQIRGQFGTW
HEPAQPPETAGFNQAAVPDDAAKPDFTLRAPVHGEVIDERAPWPGLLMAWHTVGRSHRDAAAIKLLELRLFQRIASGLER
AGISGKQSLLHYSLPLEMEHHGMTNLVLVPRANVSLDTLAAGIEKLIDQAAREPMKNTALCQLKQLWLADYQEQLSRDET
LAQWLAASPATDNAQPLLSPWIRIRDVSEDDLMRVAQRYFAGHSVRLDLKPAWHTRLGKGLLEWLPESWAEGLEELAL
>Mature_477_residues
GLLAVLGLTMMTLAPLSECQFDDQPLRRLDDAVVTRQLDNGIRLFWLPKAGKQSITLASRFAVGSRHEALRQTGWAHLFE
HLLFKGSRQAPGDGYSQLMNAMGASFNASTLFDDTRYYTRIPAQGLAFTLALERDRFEHPQFAVEAITNQQKTVLAEMAQ
TIDNQPYFRAAMTFLLSQATDTPYRHAIIGSRADILGADADSLRAFHRRFYRPSRLSMALIGALPGDVETQIRGQFGTWH
EPAQPPETAGFNQAAVPDDAAKPDFTLRAPVHGEVIDERAPWPGLLMAWHTVGRSHRDAAAIKLLELRLFQRIASGLERA
GISGKQSLLHYSLPLEMEHHGMTNLVLVPRANVSLDTLAAGIEKLIDQAAREPMKNTALCQLKQLWLADYQEQLSRDETL
AQWLAASPATDNAQPLLSPWIRIRDVSEDDLMRVAQRYFAGHSVRLDLKPAWHTRLGKGLLEWLPESWAEGLEELAL

Specific function: Unknown

COG id: COG0612

COG function: function code R; Predicted Zn-dependent peptidases

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the peptidase M16 family [H]

Homologues:

Organism=Escherichia coli, GI1787770, Length=204, Percent_Identity=25.9803921568627, Blast_Score=68, Evalue=1e-12,
Organism=Caenorhabditis elegans, GI17553678, Length=271, Percent_Identity=22.5092250922509, Blast_Score=65, Evalue=7e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011249
- InterPro:   IPR011237
- InterPro:   IPR011765
- InterPro:   IPR001431
- InterPro:   IPR007863 [H]

Pfam domain/function: PF00675 Peptidase_M16; PF05193 Peptidase_M16_C [H]

EC number: 3.4.99.- [C]

Molecular weight: Translated: 53426; Mature: 53294

Theoretical pI: Translated: 6.68; Mature: 6.68

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
3.1 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
2.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGLLAVLGLTMMTLAPLSECQFDDQPLRRLDDAVVTRQLDNGIRLFWLPKAGKQSITLAS
CHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCCEEEEECCCCCCCCHHHH
RFAVGSRHEALRQTGWAHLFEHLLFKGSRQAPGDGYSQLMNAMGASFNASTLFDDTRYYT
HHHCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHCCCCCCHHHCCCCHHHE
RIPAQGLAFTLALERDRFEHPQFAVEAITNQQKTVLAEMAQTIDNQPYFRAAMTFLLSQA
ECCCCCCEEEEEECCCCCCCHHHHHHHHHCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHC
TDTPYRHAIIGSRADILGADADSLRAFHRRFYRPSRLSMALIGALPGDVETQIRGQFGTW
CCCCHHHHHHCCCHHHCCCCHHHHHHHHHHHCCCCHHHHHHHHCCCCCCCHHHCCCCCCC
HEPAQPPETAGFNQAAVPDDAAKPDFTLRAPVHGEVIDERAPWPGLLMAWHTVGRSHRDA
CCCCCCCCCCCCCCCCCCCCCCCCCCEEECCCCCCHHHCCCCCCHHHHHHHHHCCCCCHH
AAIKLLELRLFQRIASGLERAGISGKQSLLHYSLPLEMEHHGMTNLVLVPRANVSLDTLA
HHHHHHHHHHHHHHHHHHHHCCCCCHHHHEEECCCCEECCCCCCEEEEEECCCCCHHHHH
AGIEKLIDQAAREPMKNTALCQLKQLWLADYQEQLSRDETLAQWLAASPATDNAQPLLSP
HHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHH
WIRIRDVSEDDLMRVAQRYFAGHSVRLDLKPAWHTRLGKGLLEWLPESWAEGLEELAL
HHHEECCCHHHHHHHHHHHHCCCCEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure 
GLLAVLGLTMMTLAPLSECQFDDQPLRRLDDAVVTRQLDNGIRLFWLPKAGKQSITLAS
HHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCCEEEEECCCCCCCCHHHH
RFAVGSRHEALRQTGWAHLFEHLLFKGSRQAPGDGYSQLMNAMGASFNASTLFDDTRYYT
HHHCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHCCCCCCHHHCCCCHHHE
RIPAQGLAFTLALERDRFEHPQFAVEAITNQQKTVLAEMAQTIDNQPYFRAAMTFLLSQA
ECCCCCCEEEEEECCCCCCCHHHHHHHHHCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHC
TDTPYRHAIIGSRADILGADADSLRAFHRRFYRPSRLSMALIGALPGDVETQIRGQFGTW
CCCCHHHHHHCCCHHHCCCCHHHHHHHHHHHCCCCHHHHHHHHCCCCCCCHHHCCCCCCC
HEPAQPPETAGFNQAAVPDDAAKPDFTLRAPVHGEVIDERAPWPGLLMAWHTVGRSHRDA
CCCCCCCCCCCCCCCCCCCCCCCCCCEEECCCCCCHHHCCCCCCHHHHHHHHHCCCCCHH
AAIKLLELRLFQRIASGLERAGISGKQSLLHYSLPLEMEHHGMTNLVLVPRANVSLDTLA
HHHHHHHHHHHHHHHHHHHHCCCCCHHHHEEECCCCEECCCCCCEEEEEECCCCCHHHHH
AGIEKLIDQAAREPMKNTALCQLKQLWLADYQEQLSRDETLAQWLAASPATDNAQPLLSP
HHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHH
WIRIRDVSEDDLMRVAQRYFAGHSVRLDLKPAWHTRLGKGLLEWLPESWAEGLEELAL
HHHEECCCHHHHHHHHHHHHCCCCEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: Zn [C]

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: Hydrolase; Acting on peptide bonds (Peptidases); Endopeptidases of unknown catalytic mechanism [C]

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA