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The map label for this gene is 119773828

Identifier: 119773828

GI number: 119773828

Start: 854104

End: 854457

Strand: Reverse

Name: 119773828

Synonym: Sama_0690

Alternate gene names: NA

Gene position: 854457-854104 (Counterclockwise)

Preceding gene: 119773829

Following gene: 119773827

Centisome position: 19.84

GC content: 55.08

Gene sequence:

>354_bases
ATGATTATTTTCGCGCTGGTGTTTTATTTATTGCTGGCCATTGGGGTGGCACTGAACTGGTTGCCGCTGTGGCTGCTTGT
AGGCTATGGCGGACTCGGGCTGGCAGCCTTTGTGGTCTTTGCTCTTGATAAACGCGCCGCCTTAAAAGACAAACCCAGGA
CCGCCGAAATCAAGCTCTGGCTGCTGGCACTGGTTGGTGGCTTCGGTGGTGCCATGCTGGCCATGGCGCTGTTTCGCCAT
AAAACCAGTAAACGCGGATTTTTGTGGCCATTTTACGCGGCGACCCTGCTGCATCTGCTGCTGGCACTTGGCGCCTTTTA
TTACGTCACTGCAGCAGCGCCAGCCCAGGGATAA

Upstream 100 bases:

>100_bases
GGTATTTGAGGTGCTTTAAACAAGGGCCACTGGAAAGACTATGGCGCTATCTCGCCTTTGGTCGCACTCAGAGGGCAACG
AATACCCACGGGGTAAACTC

Downstream 100 bases:

>100_bases
GCCTTGGCACCGACATCCAGGCTTTACCCGGCAGCAGCTTAACCATAAGATATTGAGTTCCATACGATAGTCAAAAGTCA
GCCATTACGGAATCCATCCC

Product: cold shock DNA-binding domain-containing protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 117; Mature: 117

Protein sequence:

>117_residues
MIIFALVFYLLLAIGVALNWLPLWLLVGYGGLGLAAFVVFALDKRAALKDKPRTAEIKLWLLALVGGFGGAMLAMALFRH
KTSKRGFLWPFYAATLLHLLLALGAFYYVTAAAPAQG

Sequences:

>Translated_117_residues
MIIFALVFYLLLAIGVALNWLPLWLLVGYGGLGLAAFVVFALDKRAALKDKPRTAEIKLWLLALVGGFGGAMLAMALFRH
KTSKRGFLWPFYAATLLHLLLALGAFYYVTAAAPAQG
>Mature_117_residues
MIIFALVFYLLLAIGVALNWLPLWLLVGYGGLGLAAFVVFALDKRAALKDKPRTAEIKLWLLALVGGFGGAMLAMALFRH
KTSKRGFLWPFYAATLLHLLLALGAFYYVTAAAPAQG

Specific function: Unknown

COG id: COG3326

COG function: function code S; Predicted membrane protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 12713; Mature: 12713

Theoretical pI: Translated: 10.57; Mature: 10.57

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
2.6 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
2.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIIFALVFYLLLAIGVALNWLPLWLLVGYGGLGLAAFVVFALDKRAALKDKPRTAEIKLW
CHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCCCCCHHHHHH
LLALVGGFGGAMLAMALFRHKTSKRGFLWPFYAATLLHLLLALGAFYYVTAAAPAQG
HHHHHHCCCHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCC
>Mature Secondary Structure
MIIFALVFYLLLAIGVALNWLPLWLLVGYGGLGLAAFVVFALDKRAALKDKPRTAEIKLW
CHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCCCCCHHHHHH
LLALVGGFGGAMLAMALFRHKTSKRGFLWPFYAATLLHLLLALGAFYYVTAAAPAQG
HHHHHHCCCHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA