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The map label for this gene is 119773776

Identifier: 119773776

GI number: 119773776

Start: 794055

End: 795434

Strand: Reverse

Name: 119773776

Synonym: Sama_0638

Alternate gene names: NA

Gene position: 795434-794055 (Counterclockwise)

Preceding gene: 119773777

Following gene: 119773775

Centisome position: 18.47

GC content: 54.42

Gene sequence:

>1380_bases
GTGAGTCAACGGGCCCCAGTACTCATGACAGCGCTCTTCCTTGGCGGCTGCGCCATGGGCGGCTTCTTTATGAGTTATCC
GGCGCAGATGGCACAGGTAAAGCAAGCCCTTTCGGGCCCAACACCCCTGTCGCCGTTGACACAAATGAGCTCTGAGCTCA
GCGGCAAAGATGGCCTGCTCTATGCGCAGGAAGCGGGACGGGTCGCCCAGATCGGAGGCGACTTTAAGGCAAGCCAGGAC
TATTACCGCAGTGCCATTGCGGCCTATGCCAAATTCGACGACCAGGCCACCGTCAGCCTCAGCAACCTCGGTGCCAATGC
CGGCAGTCTGGTATTGAATGATAATGTTATTCCCTACCGGGGGCCGGGATTTGAGCGTGTGATGCTACACCAGTATCAGG
CGCTCAATTACCTGATTCAATACGACTTTGAAGGGGCTCTGGTGGAGGTGCGCCGGGCCAACGAATTACAGGCGCAGGAG
CAAAAACGCTATGAAAAATCCAAAGAGTCCGTCAAGGCCATGGCCAACGGAACCGTGGATAGTGAAATAAACCGCCTCGA
ACAGCAGGCAGGTCAGGTCACCAGTTCTTTCTTAAATGCCTACAGCTACTACACCACAGGCCTTATCCATGAACTCCTGG
GTGAAGAAAACGACGCCTTTATCGATTATCGCAAGGCCGCTCAAATCCTCCCGGGTAATCCATACCTGGAGCAGGATTTA
GTGCGTTTGGCCAAAAAACTCGCCATGCCTCAGTATGAGGAATTTAAAGACAGGTTCGGCGACGCCATATTGCCCGGCCA
ACAGGACGGTCAACTGGTACTGCTGCTGGAGCGAGATTTTGTGTTGGCCAAGCAGCCACTGACAGTCCCCTTTACCATCA
GCGGTAACTGGCAAACTGTGTCGCTGCCAACCTATGGCAGCAGTGGTCCTGCGCCTCAACCCCTCAGTCTGATGGGACTG
GATACCCCCTTGCAACCGGCGACCATCACCAACATTGATGCACTCGCCATCAATGCCCTTAAAGAGGACTTGCCCGCGCT
GCTCATTCGCCAGGCTGCCCGGGTCTATGCCAAATCAGAGCTGACCCGCGGTGTGGAAAGCCAAAGCAAAAAACGCCGGG
ACGAATTTGATGGCGCCGCCGTGGCCATGCAGATTTTTAATGTATTAAGCGAACAGGCCGATTTACGCAGCTGGTTGACC
CTGCCAAAACAGGCACAGATTGGCCGCCGGTTTTTACCTGAGGGCGATTACAGTGTTACCCTTGGCAATGCCAGCAGGAA
CATAGAGATACGTCCCGGACAGACCACCCTGGTATGGGCGATTGACACGGGCAGCAACATCCGCTTTTATTCAATCAACA
TCAAAAGTAAATGGAACTGA

Upstream 100 bases:

>100_bases
TCTTTCAGCATGAGCTGGACCATCTCGATGGCATCACCCTGTTGGAACGCGTCACCATGGCCGCACAAGCGCACACGATG
AACGCGGGAGAGACGCCACT

Downstream 100 bases:

>100_bases
CTATGAAACACTTCAAACTGATTTTCATCCTGGCAGCGTCCCTTGGCCTGGGCGCCTGTCAATCCAGGGTTGAGTACGGA
GACGCCACCGAAGTGGAAAC

Product: TPR domain-containing protein

Products: NA

Alternate protein names: Lipoprotein; TPR Domain-Containing Protein; Adenine DNA Methylase; Tetratricopeptide Repeat Domain Protein; Tetratricopeptide TPR_2 Repeat Protein; Tetratricopeptide Repeat-Containing Protein

Number of amino acids: Translated: 459; Mature: 458

Protein sequence:

>459_residues
MSQRAPVLMTALFLGGCAMGGFFMSYPAQMAQVKQALSGPTPLSPLTQMSSELSGKDGLLYAQEAGRVAQIGGDFKASQD
YYRSAIAAYAKFDDQATVSLSNLGANAGSLVLNDNVIPYRGPGFERVMLHQYQALNYLIQYDFEGALVEVRRANELQAQE
QKRYEKSKESVKAMANGTVDSEINRLEQQAGQVTSSFLNAYSYYTTGLIHELLGEENDAFIDYRKAAQILPGNPYLEQDL
VRLAKKLAMPQYEEFKDRFGDAILPGQQDGQLVLLLERDFVLAKQPLTVPFTISGNWQTVSLPTYGSSGPAPQPLSLMGL
DTPLQPATITNIDALAINALKEDLPALLIRQAARVYAKSELTRGVESQSKKRRDEFDGAAVAMQIFNVLSEQADLRSWLT
LPKQAQIGRRFLPEGDYSVTLGNASRNIEIRPGQTTLVWAIDTGSNIRFYSINIKSKWN

Sequences:

>Translated_459_residues
MSQRAPVLMTALFLGGCAMGGFFMSYPAQMAQVKQALSGPTPLSPLTQMSSELSGKDGLLYAQEAGRVAQIGGDFKASQD
YYRSAIAAYAKFDDQATVSLSNLGANAGSLVLNDNVIPYRGPGFERVMLHQYQALNYLIQYDFEGALVEVRRANELQAQE
QKRYEKSKESVKAMANGTVDSEINRLEQQAGQVTSSFLNAYSYYTTGLIHELLGEENDAFIDYRKAAQILPGNPYLEQDL
VRLAKKLAMPQYEEFKDRFGDAILPGQQDGQLVLLLERDFVLAKQPLTVPFTISGNWQTVSLPTYGSSGPAPQPLSLMGL
DTPLQPATITNIDALAINALKEDLPALLIRQAARVYAKSELTRGVESQSKKRRDEFDGAAVAMQIFNVLSEQADLRSWLT
LPKQAQIGRRFLPEGDYSVTLGNASRNIEIRPGQTTLVWAIDTGSNIRFYSINIKSKWN
>Mature_458_residues
SQRAPVLMTALFLGGCAMGGFFMSYPAQMAQVKQALSGPTPLSPLTQMSSELSGKDGLLYAQEAGRVAQIGGDFKASQDY
YRSAIAAYAKFDDQATVSLSNLGANAGSLVLNDNVIPYRGPGFERVMLHQYQALNYLIQYDFEGALVEVRRANELQAQEQ
KRYEKSKESVKAMANGTVDSEINRLEQQAGQVTSSFLNAYSYYTTGLIHELLGEENDAFIDYRKAAQILPGNPYLEQDLV
RLAKKLAMPQYEEFKDRFGDAILPGQQDGQLVLLLERDFVLAKQPLTVPFTISGNWQTVSLPTYGSSGPAPQPLSLMGLD
TPLQPATITNIDALAINALKEDLPALLIRQAARVYAKSELTRGVESQSKKRRDEFDGAAVAMQIFNVLSEQADLRSWLTL
PKQAQIGRRFLPEGDYSVTLGNASRNIEIRPGQTTLVWAIDTGSNIRFYSINIKSKWN

Specific function: Unknown

COG id: COG3014

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 50652; Mature: 50521

Theoretical pI: Translated: 5.35; Mature: 5.35

Prosite motif: PS00013 PROKAR_LIPOPROTEIN ; PS50005 TPR ; PS50293 TPR_REGION

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.2 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
2.6 %Cys+Met (Translated Protein)
0.2 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
2.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSQRAPVLMTALFLGGCAMGGFFMSYPAQMAQVKQALSGPTPLSPLTQMSSELSGKDGLL
CCCCCHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHCCCCCCCHHHHHHHHCCCCCCEE
YAQEAGRVAQIGGDFKASQDYYRSAIAAYAKFDDQATVSLSNLGANAGSLVLNDNVIPYR
EECCCCCEEECCCCCCCCHHHHHHHHHHHHHCCCCCEEEHHHCCCCCCCEEEECCCCCCC
GPGFERVMLHQYQALNYLIQYDFEGALVEVRRANELQAQEQKRYEKSKESVKAMANGTVD
CCCHHHHHHHHHHHHHHHEEECCCCCEEEEHHHHHHHHHHHHHHHHHHHHHHHHHCCCHH
SEINRLEQQAGQVTSSFLNAYSYYTTGLIHELLGEENDAFIDYRKAAQILPGNPYLEQDL
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEHHHHHHCCCCCCCHHHHH
VRLAKKLAMPQYEEFKDRFGDAILPGQQDGQLVLLLERDFVLAKQPLTVPFTISGNWQTV
HHHHHHHCCCCHHHHHHHCCCCCCCCCCCCCEEEEEECCEEEECCCCEEEEEECCCEEEE
SLPTYGSSGPAPQPLSLMGLDTPLQPATITNIDALAINALKEDLPALLIRQAARVYAKSE
EECCCCCCCCCCCCEEEEECCCCCCCCEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LTRGVESQSKKRRDEFDGAAVAMQIFNVLSEQADLRSWLTLPKQAQIGRRFLPEGDYSVT
HHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHCCCCCCCEEE
LGNASRNIEIRPGQTTLVWAIDTGSNIRFYSINIKSKWN
ECCCCCEEEECCCCEEEEEEEECCCCEEEEEEEECCCCC
>Mature Secondary Structure 
SQRAPVLMTALFLGGCAMGGFFMSYPAQMAQVKQALSGPTPLSPLTQMSSELSGKDGLL
CCCCHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHCCCCCCCHHHHHHHHCCCCCCEE
YAQEAGRVAQIGGDFKASQDYYRSAIAAYAKFDDQATVSLSNLGANAGSLVLNDNVIPYR
EECCCCCEEECCCCCCCCHHHHHHHHHHHHHCCCCCEEEHHHCCCCCCCEEEECCCCCCC
GPGFERVMLHQYQALNYLIQYDFEGALVEVRRANELQAQEQKRYEKSKESVKAMANGTVD
CCCHHHHHHHHHHHHHHHEEECCCCCEEEEHHHHHHHHHHHHHHHHHHHHHHHHHCCCHH
SEINRLEQQAGQVTSSFLNAYSYYTTGLIHELLGEENDAFIDYRKAAQILPGNPYLEQDL
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEHHHHHHCCCCCCCHHHHH
VRLAKKLAMPQYEEFKDRFGDAILPGQQDGQLVLLLERDFVLAKQPLTVPFTISGNWQTV
HHHHHHHCCCCHHHHHHHCCCCCCCCCCCCCEEEEEECCEEEECCCCEEEEEECCCEEEE
SLPTYGSSGPAPQPLSLMGLDTPLQPATITNIDALAINALKEDLPALLIRQAARVYAKSE
EECCCCCCCCCCCCEEEEECCCCCCCCEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LTRGVESQSKKRRDEFDGAAVAMQIFNVLSEQADLRSWLTLPKQAQIGRRFLPEGDYSVT
HHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHCCCCCCCEEE
LGNASRNIEIRPGQTTLVWAIDTGSNIRFYSINIKSKWN
ECCCCCEEEECCCCEEEEEEEECCCCEEEEEEEECCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA