Definition Shewanella amazonensis SB2B chromosome, complete genome.
Accession NC_008700
Length 4,306,142

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The map label for this gene is 119773716

Identifier: 119773716

GI number: 119773716

Start: 718547

End: 719704

Strand: Reverse

Name: 119773716

Synonym: Sama_0578

Alternate gene names: NA

Gene position: 719704-718547 (Counterclockwise)

Preceding gene: 119773717

Following gene: 119773715

Centisome position: 16.71

GC content: 55.01

Gene sequence:

>1158_bases
ATGTTAAAGCGTATGCTCCCTGCTCTGTTCATTGCCGGTCTGGGCACTCTGCCCCTTTTGGCACAGGCCAATCTCGACGT
GGAAGAACTGCGACTTCCCAAGGCAAACAGCGACCTCGGTGAAGTAGCAAGCCGCTATCAGGGGCTGATTGACGGTCTCA
AAGACAAACTGGCAGCCGGTAACGAAGAAAAGGCCGTGACCCAGGCGATGGCATATCAGGGCATTCGTCTATGGCAGCAA
GCGGTGCGGGATGTGCAGGCCGGTCATATCGATGATCGCAGTTTGTATTGGGCCAGACTGGCTATGCGAACCAGTTTGAA
GCAGGACAAAGCAGGCTATGCCATTGTGCCCTGGCAAAGAGACATTCTGGTGCGCGCCGTTGAAACAGCCTCCCGGGGTT
TTTCGGATATCCATTTTGGCGACGATGTACAAATTCGCATTCTGCTTACCGGCTTTGACCCCTTCTTCCTCGACCGCAAC
ATAGGCCAGAGCAATCCGTCGGGTATCACCGCGCTGATGCTGGATGGCTATAAATTTAAGGTGGGCGGCAAGCAGGCACA
AATCGAGACGGTGATGATCCCGGTGCGCTTTGCCGATTTCGATCAGGGCATGATTGAATCGCTGTTGACGCCCTTCTATC
GCAAGCGGTCCATTGATGCGGTATTTACCGTGAGCATGGGACGCGATGATTTCGACCTCGAACGTTTCCCCGGCCGCAAC
CGCAGCGCCGAGGCCCCGGATAACCTGAATGTACTGACCGGTGCCACCAAAACCCAACCCATAGCGCCCATGCTGAACGG
GAACTCACTCAACGGCGATGAATTTGTGGAATTTTCTTTACCCGTAACAGCCATGCAGGCGGCACCGGGTAACTACAAGG
TCAATGACAATCGCAAGGTCACCACCCTGGGCAAAGGCACCTTTGATGCGTCTTCCCTCGCTGAACTTCAAGAAGCCATT
TCGGTAGAAGGCTCAGGCGGCGGCTATCTTTCCAATGAAATTTCTTACCGTGCCGTGCTGCTGAGGGACCAGTTTGGCCT
CAAATTACCCGTGGGCCATATCCATACTCCCAAGGTTGCCGGATATGACGCCGAAGCAGGGAAAGCCATAGCAGAGCAGG
TGCGCGCCATGGTAGAGCTTGCCGCCGCAACGCTGTAA

Upstream 100 bases:

>100_bases
AAGCTCGCCTTTTTTTCCGTGCTGTGGTACCCCTAAAGTTTGACTAAACTAAAGCTAACCCCATAGTCTGAAAGATGAAA
TTTGTCGTTAAGGATGCCTC

Downstream 100 bases:

>100_bases
ACAACACCGCCAGGCTTGTTTGGGTCTTGGGGCCAGAGGTATTATGCCAGAGCCTTTGATTTCAGGACCCTTATGTTTTC
GTTTTTTCGCCAGTCCAAAC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 385; Mature: 385

Protein sequence:

>385_residues
MLKRMLPALFIAGLGTLPLLAQANLDVEELRLPKANSDLGEVASRYQGLIDGLKDKLAAGNEEKAVTQAMAYQGIRLWQQ
AVRDVQAGHIDDRSLYWARLAMRTSLKQDKAGYAIVPWQRDILVRAVETASRGFSDIHFGDDVQIRILLTGFDPFFLDRN
IGQSNPSGITALMLDGYKFKVGGKQAQIETVMIPVRFADFDQGMIESLLTPFYRKRSIDAVFTVSMGRDDFDLERFPGRN
RSAEAPDNLNVLTGATKTQPIAPMLNGNSLNGDEFVEFSLPVTAMQAAPGNYKVNDNRKVTTLGKGTFDASSLAELQEAI
SVEGSGGGYLSNEISYRAVLLRDQFGLKLPVGHIHTPKVAGYDAEAGKAIAEQVRAMVELAAATL

Sequences:

>Translated_385_residues
MLKRMLPALFIAGLGTLPLLAQANLDVEELRLPKANSDLGEVASRYQGLIDGLKDKLAAGNEEKAVTQAMAYQGIRLWQQ
AVRDVQAGHIDDRSLYWARLAMRTSLKQDKAGYAIVPWQRDILVRAVETASRGFSDIHFGDDVQIRILLTGFDPFFLDRN
IGQSNPSGITALMLDGYKFKVGGKQAQIETVMIPVRFADFDQGMIESLLTPFYRKRSIDAVFTVSMGRDDFDLERFPGRN
RSAEAPDNLNVLTGATKTQPIAPMLNGNSLNGDEFVEFSLPVTAMQAAPGNYKVNDNRKVTTLGKGTFDASSLAELQEAI
SVEGSGGGYLSNEISYRAVLLRDQFGLKLPVGHIHTPKVAGYDAEAGKAIAEQVRAMVELAAATL
>Mature_385_residues
MLKRMLPALFIAGLGTLPLLAQANLDVEELRLPKANSDLGEVASRYQGLIDGLKDKLAAGNEEKAVTQAMAYQGIRLWQQ
AVRDVQAGHIDDRSLYWARLAMRTSLKQDKAGYAIVPWQRDILVRAVETASRGFSDIHFGDDVQIRILLTGFDPFFLDRN
IGQSNPSGITALMLDGYKFKVGGKQAQIETVMIPVRFADFDQGMIESLLTPFYRKRSIDAVFTVSMGRDDFDLERFPGRN
RSAEAPDNLNVLTGATKTQPIAPMLNGNSLNGDEFVEFSLPVTAMQAAPGNYKVNDNRKVTTLGKGTFDASSLAELQEAI
SVEGSGGGYLSNEISYRAVLLRDQFGLKLPVGHIHTPKVAGYDAEAGKAIAEQVRAMVELAAATL

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 42071; Mature: 42071

Theoretical pI: Translated: 5.82; Mature: 5.82

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.9 %Met     (Translated Protein)
2.9 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.9 %Met     (Mature Protein)
2.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLKRMLPALFIAGLGTLPLLAQANLDVEELRLPKANSDLGEVASRYQGLIDGLKDKLAAG
CHHHHHHHHHHHCCCCCHHHEECCCCHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHCC
NEEKAVTQAMAYQGIRLWQQAVRDVQAGHIDDRSLYWARLAMRTSLKQDKAGYAIVPWQR
CHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHCCCCEEEECCCH
DILVRAVETASRGFSDIHFGDDVQIRILLTGFDPFFLDRNIGQSNPSGITALMLDGYKFK
HHHHHHHHHHHCCCCCCCCCCCCEEEEEEECCCHHHEECCCCCCCCCCEEEEEECCEEEE
VGGKQAQIETVMIPVRFADFDQGMIESLLTPFYRKRSIDAVFTVSMGRDDFDLERFPGRN
ECCCEEEEEEEEEEEEECCCCHHHHHHHHHHHHHHCCCCEEEEEECCCCCCCHHHCCCCC
RSAEAPDNLNVLTGATKTQPIAPMLNGNSLNGDEFVEFSLPVTAMQAAPGNYKVNDNRKV
CCCCCCCCCEEEECCCCCCCCCCCCCCCCCCCCCEEEEECCEEEEECCCCCEEECCCCEE
TTLGKGTFDASSLAELQEAISVEGSGGGYLSNEISYRAVLLRDQFGLKLPVGHIHTPKVA
EEECCCCCCHHHHHHHHHHHCCCCCCCCEECCCCCEEEEEEECCCCCCCCCCCCCCCCCC
GYDAEAGKAIAEQVRAMVELAAATL
CCCCHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MLKRMLPALFIAGLGTLPLLAQANLDVEELRLPKANSDLGEVASRYQGLIDGLKDKLAAG
CHHHHHHHHHHHCCCCCHHHEECCCCHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHCC
NEEKAVTQAMAYQGIRLWQQAVRDVQAGHIDDRSLYWARLAMRTSLKQDKAGYAIVPWQR
CHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHCCCCEEEECCCH
DILVRAVETASRGFSDIHFGDDVQIRILLTGFDPFFLDRNIGQSNPSGITALMLDGYKFK
HHHHHHHHHHHCCCCCCCCCCCCEEEEEEECCCHHHEECCCCCCCCCCEEEEEECCEEEE
VGGKQAQIETVMIPVRFADFDQGMIESLLTPFYRKRSIDAVFTVSMGRDDFDLERFPGRN
ECCCEEEEEEEEEEEEECCCCHHHHHHHHHHHHHHCCCCEEEEEECCCCCCCHHHCCCCC
RSAEAPDNLNVLTGATKTQPIAPMLNGNSLNGDEFVEFSLPVTAMQAAPGNYKVNDNRKV
CCCCCCCCCEEEECCCCCCCCCCCCCCCCCCCCCEEEEECCEEEEECCCCCEEECCCCEE
TTLGKGTFDASSLAELQEAISVEGSGGGYLSNEISYRAVLLRDQFGLKLPVGHIHTPKVA
EEECCCCCCHHHHHHHHHHHCCCCCCCCEECCCCCEEEEEEECCCCCCCCCCCCCCCCCC
GYDAEAGKAIAEQVRAMVELAAATL
CCCCHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 10984043 [H]