Definition | Shewanella amazonensis SB2B chromosome, complete genome. |
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Accession | NC_008700 |
Length | 4,306,142 |
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The map label for this gene is gshB [H]
Identifier: 119773712
GI number: 119773712
Start: 715316
End: 716266
Strand: Reverse
Name: gshB [H]
Synonym: Sama_0574
Alternate gene names: 119773712
Gene position: 716266-715316 (Counterclockwise)
Preceding gene: 119773713
Following gene: 119773711
Centisome position: 16.63
GC content: 55.63
Gene sequence:
>951_bases ATGATTAAACTCGGCATAGTGATGGACCCCATCAGCGACATCAACATCAAGAAAGACTCCAGCTTTGCCATGCTGATGGC CGCCCAAAGTCGCGGCTATGAGCTGTTTTATATGGAAATGCAGGACCTGGCCATGGTCAAGGGTGAGGCCCGCGCCCGCA TGCATCCCCTCAAGGTAATGCAGAACGCCGATTGCTGGTTTGAATTGGGCGATGCAGTTGAGCAGCCGCTGGCCGAGCTT GATGTCATCCTGATGCGTAAAGACCCGCCATTCGACACCGAATATATTTACGCCACTTATATGTTGGAACGCGCCGAAGA GGCGGGCGTGTTGATTGTCAACAAGCCCCAGAGCCTGCGGGACGCCAACGAAAAGCTGTTTACCGCCTGGTTCAGCGAGT TTACTCCACTGACCATGGTCACCCGCGATGCTGGCCGCATCCGTGAGTTCCACGCCGAGCATGGTGACATTATCTTAAAG CCGCTGGATGGCATGGGCGGCGCCTCTATCTTTCGCGTCAAACAGGACGACCCGAACCTTGGCGTCATCATAGAAACCCT CACCAACCACGGTAATTGCTACGCCATGGCTCAGGTGTTTATTCCTGAAATCACCGCGGGCGACAAACGTATTCTGGTGG TGGATGGTGAGCCAGTTCCATATTGCCTGGCCCGTATCCCCAAGCAGGGTGAAACCCGGGGTAATCTTGCTGCCGGTGGC CGTGGAGTAGCACAGCCGCTGTCTGACGCCGACTGGCGCATTGCCAAGGCTCTGGGGCCGGAACTCAAGCGCCGGGGTCT GATTTTTGTGGGTCTGGACGTGATTGGCGATAAACTCACCGAAATCAACGTGACCAGCCCGACCTGTATCCGCGAAATCG AAGCGGCCTTCGACGTGGATATCACGGGCATGCTGATGAACGCCATCGAAGCCCGTATCAACAAGAAATAA
Upstream 100 bases:
>100_bases ACTTCGTACTGAAACGGCCGCGCTAACCGCCATTACGGCACTGCAAATGAAATTTGGCGATCTGGGTTAAACCCGGCTCC CCCGCATGAGAGGACGCAAT
Downstream 100 bases:
>100_bases CCGCGGGCGCCTTGCGCCCTTCTGCCTTGGGGAACCCTATGTCATCGAAATTATTGGCCCTGTTGCTGCTGGCCCTGCCC CTGACAGCCGCTGCGGCCGA
Product: glutathione synthetase
Products: NA
Alternate protein names: GSH synthetase; GSH-S; GSHase; Glutathione synthase [H]
Number of amino acids: Translated: 316; Mature: 316
Protein sequence:
>316_residues MIKLGIVMDPISDINIKKDSSFAMLMAAQSRGYELFYMEMQDLAMVKGEARARMHPLKVMQNADCWFELGDAVEQPLAEL DVILMRKDPPFDTEYIYATYMLERAEEAGVLIVNKPQSLRDANEKLFTAWFSEFTPLTMVTRDAGRIREFHAEHGDIILK PLDGMGGASIFRVKQDDPNLGVIIETLTNHGNCYAMAQVFIPEITAGDKRILVVDGEPVPYCLARIPKQGETRGNLAAGG RGVAQPLSDADWRIAKALGPELKRRGLIFVGLDVIGDKLTEINVTSPTCIREIEAAFDVDITGMLMNAIEARINKK
Sequences:
>Translated_316_residues MIKLGIVMDPISDINIKKDSSFAMLMAAQSRGYELFYMEMQDLAMVKGEARARMHPLKVMQNADCWFELGDAVEQPLAEL DVILMRKDPPFDTEYIYATYMLERAEEAGVLIVNKPQSLRDANEKLFTAWFSEFTPLTMVTRDAGRIREFHAEHGDIILK PLDGMGGASIFRVKQDDPNLGVIIETLTNHGNCYAMAQVFIPEITAGDKRILVVDGEPVPYCLARIPKQGETRGNLAAGG RGVAQPLSDADWRIAKALGPELKRRGLIFVGLDVIGDKLTEINVTSPTCIREIEAAFDVDITGMLMNAIEARINKK >Mature_316_residues MIKLGIVMDPISDINIKKDSSFAMLMAAQSRGYELFYMEMQDLAMVKGEARARMHPLKVMQNADCWFELGDAVEQPLAEL DVILMRKDPPFDTEYIYATYMLERAEEAGVLIVNKPQSLRDANEKLFTAWFSEFTPLTMVTRDAGRIREFHAEHGDIILK PLDGMGGASIFRVKQDDPNLGVIIETLTNHGNCYAMAQVFIPEITAGDKRILVVDGEPVPYCLARIPKQGETRGNLAAGG RGVAQPLSDADWRIAKALGPELKRRGLIFVGLDVIGDKLTEINVTSPTCIREIEAAFDVDITGMLMNAIEARINKK
Specific function: Glutathione biosynthesis; second step. [C]
COG id: COG0189
COG function: function code HJ; Glutathione synthase/Ribosomal protein S6 modification enzyme (glutaminyl transferase)
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 ATP-grasp domain [H]
Homologues:
Organism=Escherichia coli, GI1789316, Length=316, Percent_Identity=72.1518987341772, Blast_Score=477, Evalue=1e-136,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR011761 - InterPro: IPR013815 - InterPro: IPR013816 - InterPro: IPR006284 - InterPro: IPR004218 - InterPro: IPR004215 - InterPro: IPR013817 - InterPro: IPR016185 [H]
Pfam domain/function: PF02955 GSH-S_ATP; PF02951 GSH-S_N [H]
EC number: =6.3.2.3 [H]
Molecular weight: Translated: 35150; Mature: 35150
Theoretical pI: Translated: 4.83; Mature: 4.83
Prosite motif: PS50975 ATP_GRASP
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 5.1 %Met (Translated Protein) 6.3 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 5.1 %Met (Mature Protein) 6.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MIKLGIVMDPISDINIKKDSSFAMLMAAQSRGYELFYMEMQDLAMVKGEARARMHPLKVM CEEEEEEECCCCCCCCCCCCCEEEEEEECCCCCEEEEEEHHHHHHHCCCHHHHCCHHHHH QNADCWFELGDAVEQPLAELDVILMRKDPPFDTEYIYATYMLERAEEAGVLIVNKPQSLR CCCCHHEEHHHHHHCCHHHEEEEEEECCCCCCCHHHHHHHHHHHHHHCCEEEEECCHHHH DANEKLFTAWFSEFTPLTMVTRDAGRIREFHAEHGDIILKPLDGMGGASIFRVKQDDPNL HHHHHHHHHHHHHCCCEEEEECCHHHHHHHHCCCCCEEEEECCCCCCCEEEEEECCCCCC GVIIETLTNHGNCYAMAQVFIPEITAGDKRILVVDGEPVPYCLARIPKQGETRGNLAAGG EEEEEEECCCCCEEEEEEEEECCCCCCCCEEEEECCCCCCHHHHHCCCCCCCCCCCCCCC RGVAQPLSDADWRIAKALGPELKRRGLIFVGLDVIGDKLTEINVTSPTCIREIEAAFDVD CCCCCCCCCCCHHHHHHCCHHHHHCCEEEEEHHHHCCCEEEEECCCCHHHHHHHHHHCCC ITGMLMNAIEARINKK HHHHHHHHHHHHHCCC >Mature Secondary Structure MIKLGIVMDPISDINIKKDSSFAMLMAAQSRGYELFYMEMQDLAMVKGEARARMHPLKVM CEEEEEEECCCCCCCCCCCCCEEEEEEECCCCCEEEEEEHHHHHHHCCCHHHHCCHHHHH QNADCWFELGDAVEQPLAELDVILMRKDPPFDTEYIYATYMLERAEEAGVLIVNKPQSLR CCCCHHEEHHHHHHCCHHHEEEEEEECCCCCCCHHHHHHHHHHHHHHCCEEEEECCHHHH DANEKLFTAWFSEFTPLTMVTRDAGRIREFHAEHGDIILKPLDGMGGASIFRVKQDDPNL HHHHHHHHHHHHHCCCEEEEECCHHHHHHHHCCCCCEEEEECCCCCCCEEEEEECCCCCC GVIIETLTNHGNCYAMAQVFIPEITAGDKRILVVDGEPVPYCLARIPKQGETRGNLAAGG EEEEEEECCCCCEEEEEEEEECCCCCCCCEEEEECCCCCCHHHHHCCCCCCCCCCCCCCC RGVAQPLSDADWRIAKALGPELKRRGLIFVGLDVIGDKLTEINVTSPTCIREIEAAFDVD CCCCCCCCCCCHHHHHHCCHHHHHCCEEEEEHHHHCCCEEEEECCCCHHHHHHHHHHCCC ITGMLMNAIEARINKK HHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 12368813 [H]