Definition Shewanella amazonensis SB2B chromosome, complete genome.
Accession NC_008700
Length 4,306,142

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The map label for this gene is 119773702

Identifier: 119773702

GI number: 119773702

Start: 701524

End: 703878

Strand: Reverse

Name: 119773702

Synonym: Sama_0564

Alternate gene names: NA

Gene position: 703878-701524 (Counterclockwise)

Preceding gene: 119773704

Following gene: 119773701

Centisome position: 16.35

GC content: 56.43

Gene sequence:

>2355_bases
ATGGGAATGTTAACAAAATGGTCGCTGCTGACCTGTGTGCTGCTGGGCAGCCTTCAGCTGCATGCCGAAGATCTCACTCA
ATGGGTTGACCCTTTCATCGGCACAGGCGGCGATGGCCATACCTTTCCCGGTGCCGTTGTGCCCTTCGGCATGGTGCAGT
TAAGCCCCGATACCGACAATCCCATGCGTGGCGTATCGCCTCAAAGCGAAATCTACAAGCGCTGCGCCGGTTACCACTAT
GACGACAGCACCATAGTTGGCTTCTCCCACACGCATTTCAGCGGCACAGGCCACTCGGATCTGGGCGATCTCTTGATTAT
GCCGATGACAGGCACTCCCCACACAGAGCCAGGCACGGCGACAGATCCAGACAGTGGCTATCGCTCCCGTTTCAGCCACG
ACGATGAAGAAGCCTCACCCGGCTACTACCGGGTTAAACTCACCGATTATCAAATCGATGCCGAACTCACCACTACCGCT
CGCACCGGCATGCACAGGTACAGCTTCCCCGAAACCCATCAGGGCCATGTACTGATTGATTTGACCCACGGCATCTACAA
CTTTGCCAATAAGGTGATTTGGAGCGATGTGCGGGTGGTGGACGACAGCACCCTTATCACCTCGCGTCGCTCCAACGGCT
GGGCGCACGAGCGGCCCATGTACTTCGCCATCCGTTTCTCCCGCCCTTTCGACGACATTGAACTTATCAACGAAGACAAC
GCCCGCTACCGCTGCATGGGCTGTCTCGACAAGAAAGATGGCAAGCACTCCACCATAGTCAACAGCCGCATCCCTTTTAC
TGCGGGTAAGGCGGTGAAGGTGCTGGCTCGATTCGATAACCCCCATCAGGCGCCGCTTTTGGTAAAAGTGGGCATATCAG
CAGTGGATAAGAGTAATGCGCTGGATAACTTAACCAGCGAGCTGCCCCACTGGGATTTTGACAAGGTACGCAGCGACGCC
AACGCCGCCTGGCAGACCGAGCTTGAACGGATGGAAGCCAAGGGCGACCAGTCGCAAAAGCGCCAGTTCTATACCGCGTT
CTACCACGCGCTGCAGGCACCGAGTCTGTATCAGGACGTCAATGGCGAGTACCTCGGTGTAGATGGTGAAATCCATAAGG
CCGACTTTCCCCACTACAGCCTTTTTTCACTGTGGGATACCTACCGCGCCCTGCATCCGCTGCTGACTCTGGTGTCCCCC
GAGCGGGTGCCGGACATGATTAACTCCATGCTGGCCCATTATGACCAGAGCTATGACCGTATCCTGCCGATATGGTCTTT
TCAGGGCCACGAGACCTGGACCATGATTGGCTACCATGCTGTCTCTGTTATCAGCGACGCCTGGCAAAAGGGTATTCGCG
GCTTTGATGGAGAGCGGGCGCTGGATGCCATGACCGCCACCGCCAACCACCCCAACTACGATGCCATCCCTGAGTATCTT
AAATACGGCTATGTGCCCATGGATGTGCTGCCCGAGTCAGTGTCCATCACCCTGGAATACGCCTACGATGACTTTGCCAT
CGCCCGCATGGCACAGAGCATGGGCGAAACAGACATCGCCAAAGCCTTCGACAAGCGCGCCCAGAGCTGGCGTAACGTGT
TTGATCCCGAAACCAAATTTGCCCGCGGCCGCGACAGCAAAGGCCACTGGGACAAAGACTTCGACGTGGAAGAAGCCAAG
TACATGGGCCCCTTTACCGAGGGCAACAGCTTCCAGTACAGCTTCTATGTACCCCACGATGTGGCGGGGCTTATCGATAT
CAAGGGGGGCGACGGCGCCTTTATCGAGCGTTTGGATGAGCTTTTTACCCGTCCGCTCCATGCCGACAAAATCAAGGAAC
ATGAGGATATCGCCGGTTTGATTGGCCAGTACGCCCACGGCAACGAGCCAAGCCACCACATTGCTTATCTATACAACCAC
GCCGGCGCCCCCTGGATGACCCAGGCACGTATCCGCCAAATCATGGATACCCTGTCAAATGACACGCCATCGGGCCTCGC
CGGTAACGACGATGTGGGTCAGATGTCGGCCTGGTATCTGTTCTCAGCCATGGGCTTTTACCCGGTGACGCCGGGGGATA
TGACCTACGTGATTGGCGCGCCGCAGCTGCCTGAGGTGACTCTCAATCTCAGTAACGGCAAGCACTTTAAGGTTATCGCC
AAGGGGCTGTCCAAGGACAAGCTGTACATTGCCAGCGTCAGTCTGAATGGCAAGCCGCTAAATCGAAGCTATCTGCACCA
CGATGACATCATGGCCGGTGGCGAGCTGGTGTTTGAGATGGCAGCTACGCCGAACAAAGCCTGGGGCATGGCAATTGATA
CCCGCCCCAAGGCCATGAGCCCTTACAAAAACTAA

Upstream 100 bases:

>100_bases
ACCAGCCACTAATTATATTAACACAAATTGGAACGTTCCAATTGCATTTTATCCATACTAACCCATTGCCTAAAAAAGAA
AACAGCAAGGAGCCCTGCGG

Downstream 100 bases:

>100_bases
AAACGTCCATAGTCAAAAACGGAAAAGGACAAACAAGGACAGACAATGCACATACCTCGTACCCTCATCGGCATCGCCGT
TTCTGCCGCGCTTGGCGCCA

Product: alpha-1,2-mannosidase family protein

Products: NA

Alternate protein names: Alpha-1 2-Mannosidase Family Protein; Glycoside Hydrolase Family; Glycosyl Hydrolase Family; Sugar Hydrolase; Secreted Protein; Glycoside Hydrolase Family Protein; Outer Membrane Protein; Immunoreactive; Exported Alpha-1 2-Mannosidase; Antigen; Alpha-1 2-Mannosidase Protein; Lipoprotein

Number of amino acids: Translated: 784; Mature: 783

Protein sequence:

>784_residues
MGMLTKWSLLTCVLLGSLQLHAEDLTQWVDPFIGTGGDGHTFPGAVVPFGMVQLSPDTDNPMRGVSPQSEIYKRCAGYHY
DDSTIVGFSHTHFSGTGHSDLGDLLIMPMTGTPHTEPGTATDPDSGYRSRFSHDDEEASPGYYRVKLTDYQIDAELTTTA
RTGMHRYSFPETHQGHVLIDLTHGIYNFANKVIWSDVRVVDDSTLITSRRSNGWAHERPMYFAIRFSRPFDDIELINEDN
ARYRCMGCLDKKDGKHSTIVNSRIPFTAGKAVKVLARFDNPHQAPLLVKVGISAVDKSNALDNLTSELPHWDFDKVRSDA
NAAWQTELERMEAKGDQSQKRQFYTAFYHALQAPSLYQDVNGEYLGVDGEIHKADFPHYSLFSLWDTYRALHPLLTLVSP
ERVPDMINSMLAHYDQSYDRILPIWSFQGHETWTMIGYHAVSVISDAWQKGIRGFDGERALDAMTATANHPNYDAIPEYL
KYGYVPMDVLPESVSITLEYAYDDFAIARMAQSMGETDIAKAFDKRAQSWRNVFDPETKFARGRDSKGHWDKDFDVEEAK
YMGPFTEGNSFQYSFYVPHDVAGLIDIKGGDGAFIERLDELFTRPLHADKIKEHEDIAGLIGQYAHGNEPSHHIAYLYNH
AGAPWMTQARIRQIMDTLSNDTPSGLAGNDDVGQMSAWYLFSAMGFYPVTPGDMTYVIGAPQLPEVTLNLSNGKHFKVIA
KGLSKDKLYIASVSLNGKPLNRSYLHHDDIMAGGELVFEMAATPNKAWGMAIDTRPKAMSPYKN

Sequences:

>Translated_784_residues
MGMLTKWSLLTCVLLGSLQLHAEDLTQWVDPFIGTGGDGHTFPGAVVPFGMVQLSPDTDNPMRGVSPQSEIYKRCAGYHY
DDSTIVGFSHTHFSGTGHSDLGDLLIMPMTGTPHTEPGTATDPDSGYRSRFSHDDEEASPGYYRVKLTDYQIDAELTTTA
RTGMHRYSFPETHQGHVLIDLTHGIYNFANKVIWSDVRVVDDSTLITSRRSNGWAHERPMYFAIRFSRPFDDIELINEDN
ARYRCMGCLDKKDGKHSTIVNSRIPFTAGKAVKVLARFDNPHQAPLLVKVGISAVDKSNALDNLTSELPHWDFDKVRSDA
NAAWQTELERMEAKGDQSQKRQFYTAFYHALQAPSLYQDVNGEYLGVDGEIHKADFPHYSLFSLWDTYRALHPLLTLVSP
ERVPDMINSMLAHYDQSYDRILPIWSFQGHETWTMIGYHAVSVISDAWQKGIRGFDGERALDAMTATANHPNYDAIPEYL
KYGYVPMDVLPESVSITLEYAYDDFAIARMAQSMGETDIAKAFDKRAQSWRNVFDPETKFARGRDSKGHWDKDFDVEEAK
YMGPFTEGNSFQYSFYVPHDVAGLIDIKGGDGAFIERLDELFTRPLHADKIKEHEDIAGLIGQYAHGNEPSHHIAYLYNH
AGAPWMTQARIRQIMDTLSNDTPSGLAGNDDVGQMSAWYLFSAMGFYPVTPGDMTYVIGAPQLPEVTLNLSNGKHFKVIA
KGLSKDKLYIASVSLNGKPLNRSYLHHDDIMAGGELVFEMAATPNKAWGMAIDTRPKAMSPYKN
>Mature_783_residues
GMLTKWSLLTCVLLGSLQLHAEDLTQWVDPFIGTGGDGHTFPGAVVPFGMVQLSPDTDNPMRGVSPQSEIYKRCAGYHYD
DSTIVGFSHTHFSGTGHSDLGDLLIMPMTGTPHTEPGTATDPDSGYRSRFSHDDEEASPGYYRVKLTDYQIDAELTTTAR
TGMHRYSFPETHQGHVLIDLTHGIYNFANKVIWSDVRVVDDSTLITSRRSNGWAHERPMYFAIRFSRPFDDIELINEDNA
RYRCMGCLDKKDGKHSTIVNSRIPFTAGKAVKVLARFDNPHQAPLLVKVGISAVDKSNALDNLTSELPHWDFDKVRSDAN
AAWQTELERMEAKGDQSQKRQFYTAFYHALQAPSLYQDVNGEYLGVDGEIHKADFPHYSLFSLWDTYRALHPLLTLVSPE
RVPDMINSMLAHYDQSYDRILPIWSFQGHETWTMIGYHAVSVISDAWQKGIRGFDGERALDAMTATANHPNYDAIPEYLK
YGYVPMDVLPESVSITLEYAYDDFAIARMAQSMGETDIAKAFDKRAQSWRNVFDPETKFARGRDSKGHWDKDFDVEEAKY
MGPFTEGNSFQYSFYVPHDVAGLIDIKGGDGAFIERLDELFTRPLHADKIKEHEDIAGLIGQYAHGNEPSHHIAYLYNHA
GAPWMTQARIRQIMDTLSNDTPSGLAGNDDVGQMSAWYLFSAMGFYPVTPGDMTYVIGAPQLPEVTLNLSNGKHFKVIAK
GLSKDKLYIASVSLNGKPLNRSYLHHDDIMAGGELVFEMAATPNKAWGMAIDTRPKAMSPYKN

Specific function: Unknown

COG id: COG3537

COG function: function code G; Putative alpha-1,2-mannosidase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 88007; Mature: 87875

Theoretical pI: Translated: 5.78; Mature: 5.78

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
3.4 %Met     (Translated Protein)
4.0 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
3.3 %Met     (Mature Protein)
3.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGMLTKWSLLTCVLLGSLQLHAEDLTQWVDPFIGTGGDGHTFPGAVVPFGMVQLSPDTDN
CCCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCCCCCCCCCCHHCCCCEEEECCCCCC
PMRGVSPQSEIYKRCAGYHYDDSTIVGFSHTHFSGTGHSDLGDLLIMPMTGTPHTEPGTA
CCCCCCCHHHHHHHHCCCCCCCCEEEEEEECCCCCCCCCCCCCEEEEECCCCCCCCCCCC
TDPDSGYRSRFSHDDEEASPGYYRVKLTDYQIDAELTTTARTGMHRYSFPETHQGHVLID
CCCCCCHHHHCCCCCCCCCCCEEEEEEEEEEECCEEEHHHHHCCCCCCCCCCCCCCEEEE
LTHGIYNFANKVIWSDVRVVDDSTLITSRRSNGWAHERPMYFAIRFSRPFDDIELINEDN
ECHHHHHHHHHHHHCCEEEECCCEEEEECCCCCCCCCCCEEEEEEECCCCCCHHEECCCC
ARYRCMGCLDKKDGKHSTIVNSRIPFTAGKAVKVLARFDNPHQAPLLVKVGISAVDKSNA
CCEEEEECCCCCCCCCCEEECCCCCCCCCHHHHHEECCCCCCCCCEEEEECCHHHCCCHH
LDNLTSELPHWDFDKVRSDANAAWQTELERMEAKGDQSQKRQFYTAFYHALQAPSLYQDV
HHHHHHHCCCCCHHHHHCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCHHHHHC
NGEYLGVDGEIHKADFPHYSLFSLWDTYRALHPLLTLVSPERVPDMINSMLAHYDQSYDR
CCCEEECCCEEECCCCCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCCC
ILPIWSFQGHETWTMIGYHAVSVISDAWQKGIRGFDGERALDAMTATANHPNYDAIPEYL
EEEEEECCCCCEEEEHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHCCCCCCHHHHHHHH
KYGYVPMDVLPESVSITLEYAYDDFAIARMAQSMGETDIAKAFDKRAQSWRNVFDPETKF
HCCCCCHHHCCCCEEEEEEECCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCCCHHH
ARGRDSKGHWDKDFDVEEAKYMGPFTEGNSFQYSFYVPHDVAGLIDIKGGDGAFIERLDE
HCCCCCCCCCCCCCCHHHHHHCCCCCCCCCEEEEEECCCCCCEEEEEECCCCHHHHHHHH
LFTRPLHADKIKEHEDIAGLIGQYAHGNEPSHHIAYLYNHAGAPWMTQARIRQIMDTLSN
HHHCCCCHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEEECCCCCCHHHHHHHHHHHHHCC
DTPSGLAGNDDVGQMSAWYLFSAMGFYPVTPGDMTYVIGAPQLPEVTLNLSNGKHFKVIA
CCCCCCCCCCCCHHHHHHHHHHHCCCEECCCCCEEEEECCCCCCEEEEECCCCCEEEEEE
KGLSKDKLYIASVSLNGKPLNRSYLHHDDIMAGGELVFEMAATPNKAWGMAIDTRPKAMS
CCCCCCEEEEEEEEECCCCCCCCCCCCCCCCCCCCEEEEECCCCCCCCCEEECCCCCCCC
PYKN
CCCC
>Mature Secondary Structure 
GMLTKWSLLTCVLLGSLQLHAEDLTQWVDPFIGTGGDGHTFPGAVVPFGMVQLSPDTDN
CCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCCCCCCCCCCHHCCCCEEEECCCCCC
PMRGVSPQSEIYKRCAGYHYDDSTIVGFSHTHFSGTGHSDLGDLLIMPMTGTPHTEPGTA
CCCCCCCHHHHHHHHCCCCCCCCEEEEEEECCCCCCCCCCCCCEEEEECCCCCCCCCCCC
TDPDSGYRSRFSHDDEEASPGYYRVKLTDYQIDAELTTTARTGMHRYSFPETHQGHVLID
CCCCCCHHHHCCCCCCCCCCCEEEEEEEEEEECCEEEHHHHHCCCCCCCCCCCCCCEEEE
LTHGIYNFANKVIWSDVRVVDDSTLITSRRSNGWAHERPMYFAIRFSRPFDDIELINEDN
ECHHHHHHHHHHHHCCEEEECCCEEEEECCCCCCCCCCCEEEEEEECCCCCCHHEECCCC
ARYRCMGCLDKKDGKHSTIVNSRIPFTAGKAVKVLARFDNPHQAPLLVKVGISAVDKSNA
CCEEEEECCCCCCCCCCEEECCCCCCCCCHHHHHEECCCCCCCCCEEEEECCHHHCCCHH
LDNLTSELPHWDFDKVRSDANAAWQTELERMEAKGDQSQKRQFYTAFYHALQAPSLYQDV
HHHHHHHCCCCCHHHHHCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCHHHHHC
NGEYLGVDGEIHKADFPHYSLFSLWDTYRALHPLLTLVSPERVPDMINSMLAHYDQSYDR
CCCEEECCCEEECCCCCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCCC
ILPIWSFQGHETWTMIGYHAVSVISDAWQKGIRGFDGERALDAMTATANHPNYDAIPEYL
EEEEEECCCCCEEEEHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHCCCCCCHHHHHHHH
KYGYVPMDVLPESVSITLEYAYDDFAIARMAQSMGETDIAKAFDKRAQSWRNVFDPETKF
HCCCCCHHHCCCCEEEEEEECCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCCCHHH
ARGRDSKGHWDKDFDVEEAKYMGPFTEGNSFQYSFYVPHDVAGLIDIKGGDGAFIERLDE
HCCCCCCCCCCCCCCHHHHHHCCCCCCCCCEEEEEECCCCCCEEEEEECCCCHHHHHHHH
LFTRPLHADKIKEHEDIAGLIGQYAHGNEPSHHIAYLYNHAGAPWMTQARIRQIMDTLSN
HHHCCCCHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEEECCCCCCHHHHHHHHHHHHHCC
DTPSGLAGNDDVGQMSAWYLFSAMGFYPVTPGDMTYVIGAPQLPEVTLNLSNGKHFKVIA
CCCCCCCCCCCCHHHHHHHHHHHCCCEECCCCCEEEEECCCCCCEEEEECCCCCEEEEEE
KGLSKDKLYIASVSLNGKPLNRSYLHHDDIMAGGELVFEMAATPNKAWGMAIDTRPKAMS
CCCCCCEEEEEEEEECCCCCCCCCCCCCCCCCCCCEEEEECCCCCCCCCEEECCCCCCCC
PYKN
CCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA