Definition Shewanella amazonensis SB2B chromosome, complete genome.
Accession NC_008700
Length 4,306,142

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The map label for this gene is 119773701

Identifier: 119773701

GI number: 119773701

Start: 698929

End: 701478

Strand: Reverse

Name: 119773701

Synonym: Sama_0563

Alternate gene names: NA

Gene position: 701478-698929 (Counterclockwise)

Preceding gene: 119773702

Following gene: 119773700

Centisome position: 16.29

GC content: 57.84

Gene sequence:

>2550_bases
ATGCACATACCTCGTACCCTCATCGGCATCGCCGTTTCTGCCGCGCTTGGCGCCATCTCGCTCAGTGGCTGCAGCAGCGA
AGCCGATACAAATCGAAACCAGCAGGCCAACCCGGCGACTACTGCCGTTAACGCTACTACCAATGCTAACGCAACGGCCC
CCAACTGGATTAAACAGCCGGTGGACTTTGTTGACCCTTTGATTGGCAGCCAGGGGGTATTCAACCATCGCCAGGCCGCC
AACGTGGCTGTGGGCGCCTCACTGCCCTTTGGCATGTTCAACTTTGGTCCCGAGCACGCCTATACCGAGGCGCTGCTGAA
TGAAAGTGAAGGGCTGAAAAAGCGGGTGCTGGAAGAAAAGGTACGCATTCCTGTCTCCCCCGGCGGTTACAACTACGATG
CCACCCGCGTTAAGGGTTTCAGCTTTACCCGCCTGTCAGGCACCGGCTGCCTTGGCGCCTCCGGCGAAGTGCCTGTGCTG
CCTTTTTTAGAGCCTATCAAGCATTCACCCGACACAGACCTGATGGACACTTACTACAGCGTGGGTTACAGCCACGCCAA
TGAAAGTGTGCGCCCGGGCAGCTACCGCATCACCCTGGATAACGGCGTTGGTGTGAATTTAAGCGCCACGGAGCGCAGCG
GCATCGCTGAGTTTGCCTTCCCCAAAGACGCCGCCGCCAAACTGCTGTTTCGCACCGCCTATAACCAGCTTGGCAGCGAA
AAGGCAAGCACCCGCTTTCACCCCGAGACCGGTGAAATCACAGGCTCAGTTACCAGCGGTAACTTCTGCGGCTATTTGGG
TGAAGCCAACCGCTACAGCTATTACACCCTGCACTTTGTCGCCAAACTCGATGTACCTGTGACCTCCAGCGGCGGCTGGC
AGGATGACAAGATGCGGCCCGGCGCCAGCTACAGCGAGGGCGGTACCGGCTATGGCCCCAAGGGCGTCCCCGAATTGGGC
AAGGGTTCAGGCCTGTGGCTTGAGCTGGATACCTCAGTGCAGCAAAAGGTCACCATGCGGGTGGGTATCTCTTACGTAAG
TGAAGCCAATGCCCGCCAAAATCTGATTGCCGAGCAGGCCCATAAGGACTTTGCCGCGGTGGAAGCGGCGGCCAATCAAC
GCTGGAACGATACCCTCGCCAAGGTCGCCGTTGCTGCCGACCCCGTGGATGCCAAAAACCGGCTGACCACCTTTTACACC
GCGCTTTACCATGCCCTGCACCACCCTAATCTGTTCAGTGACGTCAATGGCGAGTACACCGGCTTCGATGGCACGGTACA
CCGCCTGAGTCAGGGCCAGCAGGCACAATACGCCAACTATTCGCTGTGGGATGTGTATCGCTCGCAGCTGCAACTTATCA
GCCTGATGGAGCCCAAAGTTGGCTCCGACATGGCCCAGTCGATGCTCAATCAGGCCAATCAATACGGCGGTGTGTGGGAC
AGATGGACCCACAATTCAGGACCCACCTCGGTGATGTCCGGCGATCCTTCCACCATCGCCATTGCCAATTTTGTCGCCTT
TGGCGCCGATGACTTTGCCGTCAAAGAGGCCTATCAGTCACTGTACAAGGCTGCTACCGAGCCGACCCAGTTTGACCTTG
GCAACACCGGCTGCCCGGTGTTCTGCCGAGGTCAGCGCCCGTCGCTGGATCAGTGGCTGTCGCTCAATTACATTTCCGAC
CAATCCAATAGCTGGGAAGGCGCCAGCGAAACCCTGGAGCAGGTGAGCGCCGATTTCGCCCTCTCGCAGCTGGCGGCACG
TCTTGGCAAGCAAAGCCAGAGCGACGAGATGCTCGCCCGCGCCGGCTACTGGAAAAACCTCTACAACCCCAAAGCCACCG
ACAAGCTGGGCTACATTCAGGGCCGTAACAAAGATGGCAGCTGGAAGGCAGACTTTGATCCCGCAAGCCCGCATCTCTTT
GTCGAAGGCAGCCCGGCTCAGTATCTGTGGATGCTGCCCTTTGATGGTGCCGGCATGTCAGCACTGCTCGGCGGTGATGC
GGCTATGGAAGCGCGACTCGATAGCCACTTTATCAAGCCCGATGGCAGCTATGTGCTGTTTCGCGATGATGCCTTTTATG
CCGATGTGTCCAATCAGCCGTCCATCAACAGCCCCTGGATGTACCTGCATACAGGCGCCGCCTATAAAACCCAGAAGGTA
GTGCGCGAAACCCTGAACACCCTGTGGCTGCCAACGCCAAAAGGCATTCCCGGGCAGGACGATTTGGGACAGATGTCATC
CTGGTACGTGTTTTCGGCACTCGGGCTTTACCCCATGCTGCCGGGCCGCGCCGAACTGGTACTGGCCGCCCCCGTGTTTG
AAGCGGCCGAGATTGGCAAGCTCAGCATTCGCGCGCCCGGCGCCAGCAACGACAGGCTCTATATCGATGAAGTAGTGCTT
AATGGCCATCCAAACCTGAAGAGCTTTATTTCGCCGGAGTATATAGACCACAAAACCAGTCTGGAATTTAAGCTCAGCGA
TAAGCCAAACCCGGCCTTTGGTCAGGCCAAAACTGACCGTCCTCCTTCATTTTCACTGACAGGGAACTAA

Upstream 100 bases:

>100_bases
CTGGGGCATGGCAATTGATACCCGCCCCAAGGCCATGAGCCCTTACAAAAACTAAAAACGTCCATAGTCAAAAACGGAAA
AGGACAAACAAGGACAGACA

Downstream 100 bases:

>100_bases
GCCATGGCCTTCGTTTCATCCACCACCCCACAAAACGGCAGCGCTGCACCAGCCCAAAGCCACCAGCAGTTGCTGTTTGG
CGCCATGACCAGTTTGTTTT

Product: alpha-1,2-mannosidase family protein

Products: NA

Alternate protein names: Alpha-1 2-Mannosidase Family Protein; Glycoside Hydrolase Family; Glycosyl Hydrolase Family; Secreted Protein; Sugar Hydrolase; Glycoside Hydrolase Family Protein; Outer Membrane Protein; Immunoreactive; Exported Alpha-1 2-Mannosidase; Antigen; Glycosyltransferase; Alpha-1 2-Mannosidase Protein; Lipoprotein

Number of amino acids: Translated: 849; Mature: 849

Protein sequence:

>849_residues
MHIPRTLIGIAVSAALGAISLSGCSSEADTNRNQQANPATTAVNATTNANATAPNWIKQPVDFVDPLIGSQGVFNHRQAA
NVAVGASLPFGMFNFGPEHAYTEALLNESEGLKKRVLEEKVRIPVSPGGYNYDATRVKGFSFTRLSGTGCLGASGEVPVL
PFLEPIKHSPDTDLMDTYYSVGYSHANESVRPGSYRITLDNGVGVNLSATERSGIAEFAFPKDAAAKLLFRTAYNQLGSE
KASTRFHPETGEITGSVTSGNFCGYLGEANRYSYYTLHFVAKLDVPVTSSGGWQDDKMRPGASYSEGGTGYGPKGVPELG
KGSGLWLELDTSVQQKVTMRVGISYVSEANARQNLIAEQAHKDFAAVEAAANQRWNDTLAKVAVAADPVDAKNRLTTFYT
ALYHALHHPNLFSDVNGEYTGFDGTVHRLSQGQQAQYANYSLWDVYRSQLQLISLMEPKVGSDMAQSMLNQANQYGGVWD
RWTHNSGPTSVMSGDPSTIAIANFVAFGADDFAVKEAYQSLYKAATEPTQFDLGNTGCPVFCRGQRPSLDQWLSLNYISD
QSNSWEGASETLEQVSADFALSQLAARLGKQSQSDEMLARAGYWKNLYNPKATDKLGYIQGRNKDGSWKADFDPASPHLF
VEGSPAQYLWMLPFDGAGMSALLGGDAAMEARLDSHFIKPDGSYVLFRDDAFYADVSNQPSINSPWMYLHTGAAYKTQKV
VRETLNTLWLPTPKGIPGQDDLGQMSSWYVFSALGLYPMLPGRAELVLAAPVFEAAEIGKLSIRAPGASNDRLYIDEVVL
NGHPNLKSFISPEYIDHKTSLEFKLSDKPNPAFGQAKTDRPPSFSLTGN

Sequences:

>Translated_849_residues
MHIPRTLIGIAVSAALGAISLSGCSSEADTNRNQQANPATTAVNATTNANATAPNWIKQPVDFVDPLIGSQGVFNHRQAA
NVAVGASLPFGMFNFGPEHAYTEALLNESEGLKKRVLEEKVRIPVSPGGYNYDATRVKGFSFTRLSGTGCLGASGEVPVL
PFLEPIKHSPDTDLMDTYYSVGYSHANESVRPGSYRITLDNGVGVNLSATERSGIAEFAFPKDAAAKLLFRTAYNQLGSE
KASTRFHPETGEITGSVTSGNFCGYLGEANRYSYYTLHFVAKLDVPVTSSGGWQDDKMRPGASYSEGGTGYGPKGVPELG
KGSGLWLELDTSVQQKVTMRVGISYVSEANARQNLIAEQAHKDFAAVEAAANQRWNDTLAKVAVAADPVDAKNRLTTFYT
ALYHALHHPNLFSDVNGEYTGFDGTVHRLSQGQQAQYANYSLWDVYRSQLQLISLMEPKVGSDMAQSMLNQANQYGGVWD
RWTHNSGPTSVMSGDPSTIAIANFVAFGADDFAVKEAYQSLYKAATEPTQFDLGNTGCPVFCRGQRPSLDQWLSLNYISD
QSNSWEGASETLEQVSADFALSQLAARLGKQSQSDEMLARAGYWKNLYNPKATDKLGYIQGRNKDGSWKADFDPASPHLF
VEGSPAQYLWMLPFDGAGMSALLGGDAAMEARLDSHFIKPDGSYVLFRDDAFYADVSNQPSINSPWMYLHTGAAYKTQKV
VRETLNTLWLPTPKGIPGQDDLGQMSSWYVFSALGLYPMLPGRAELVLAAPVFEAAEIGKLSIRAPGASNDRLYIDEVVL
NGHPNLKSFISPEYIDHKTSLEFKLSDKPNPAFGQAKTDRPPSFSLTGN
>Mature_849_residues
MHIPRTLIGIAVSAALGAISLSGCSSEADTNRNQQANPATTAVNATTNANATAPNWIKQPVDFVDPLIGSQGVFNHRQAA
NVAVGASLPFGMFNFGPEHAYTEALLNESEGLKKRVLEEKVRIPVSPGGYNYDATRVKGFSFTRLSGTGCLGASGEVPVL
PFLEPIKHSPDTDLMDTYYSVGYSHANESVRPGSYRITLDNGVGVNLSATERSGIAEFAFPKDAAAKLLFRTAYNQLGSE
KASTRFHPETGEITGSVTSGNFCGYLGEANRYSYYTLHFVAKLDVPVTSSGGWQDDKMRPGASYSEGGTGYGPKGVPELG
KGSGLWLELDTSVQQKVTMRVGISYVSEANARQNLIAEQAHKDFAAVEAAANQRWNDTLAKVAVAADPVDAKNRLTTFYT
ALYHALHHPNLFSDVNGEYTGFDGTVHRLSQGQQAQYANYSLWDVYRSQLQLISLMEPKVGSDMAQSMLNQANQYGGVWD
RWTHNSGPTSVMSGDPSTIAIANFVAFGADDFAVKEAYQSLYKAATEPTQFDLGNTGCPVFCRGQRPSLDQWLSLNYISD
QSNSWEGASETLEQVSADFALSQLAARLGKQSQSDEMLARAGYWKNLYNPKATDKLGYIQGRNKDGSWKADFDPASPHLF
VEGSPAQYLWMLPFDGAGMSALLGGDAAMEARLDSHFIKPDGSYVLFRDDAFYADVSNQPSINSPWMYLHTGAAYKTQKV
VRETLNTLWLPTPKGIPGQDDLGQMSSWYVFSALGLYPMLPGRAELVLAAPVFEAAEIGKLSIRAPGASNDRLYIDEVVL
NGHPNLKSFISPEYIDHKTSLEFKLSDKPNPAFGQAKTDRPPSFSLTGN

Specific function: Unknown

COG id: COG3537

COG function: function code G; Putative alpha-1,2-mannosidase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 92224; Mature: 92224

Theoretical pI: Translated: 5.61; Mature: 5.61

Prosite motif: PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
2.5 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
2.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MHIPRTLIGIAVSAALGAISLSGCSSEADTNRNQQANPATTAVNATTNANATAPNWIKQP
CCCCHHHHHHHHHHHHHHEEECCCCCCCCCCCCCCCCCCCEEEECCCCCCCCCCHHHHCC
VDFVDPLIGSQGVFNHRQAANVAVGASLPFGMFNFGPEHAYTEALLNESEGLKKRVLEEK
HHHHHHHCCCCCCCCCHHHCCEEEECCCCCCCCCCCCHHHHHHHHHCCCCHHHHHHHHHH
VRIPVSPGGYNYDATRVKGFSFTRLSGTGCLGASGEVPVLPFLEPIKHSPDTDLMDTYYS
HCCCCCCCCCCCCCCEECCEEEEEECCCCCCCCCCCCCCCCCHHHHCCCCCCHHHHHHHH
VGYSHANESVRPGSYRITLDNGVGVNLSATERSGIAEFAFPKDAAAKLLFRTAYNQLGSE
HHHHHCCCCCCCCEEEEEECCCCCEEEECCCCCCCCHHCCCHHHHHHHHHHHHHHHHCCC
KASTRFHPETGEITGSVTSGNFCGYLGEANRYSYYTLHFVAKLDVPVTSSGGWQDDKMRP
HHCCCCCCCCCCEEEEEECCCCEEECCCCCCEEEEEEEEEEEECCEECCCCCCCCCCCCC
GASYSEGGTGYGPKGVPELGKGSGLWLELDTSVQQKVTMRVGISYVSEANARQNLIAEQA
CCCCCCCCCCCCCCCCCCCCCCCCEEEEECCCHHHHHHHHHHHHHHHHCCHHHHHHHHHH
HKDFAAVEAAANQRWNDTLAKVAVAADPVDAKNRLTTFYTALYHALHHPNLFSDVNGEYT
HHHHHHHHHHHCCCHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHCCCCCHHCCCCCCC
GFDGTVHRLSQGQQAQYANYSLWDVYRSQLQLISLMEPKVGSDMAQSMLNQANQYGGVWD
CCCHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCCCC
RWTHNSGPTSVMSGDPSTIAIANFVAFGADDFAVKEAYQSLYKAATEPTQFDLGNTGCPV
CCCCCCCCCCEECCCCCEEEEEHHHHCCCCHHHHHHHHHHHHHHCCCCCEECCCCCCCCE
FCRGQRPSLDQWLSLNYISDQSNSWEGASETLEQVSADFALSQLAARLGKQSQSDEMLAR
EECCCCCCHHHHEEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHH
AGYWKNLYNPKATDKLGYIQGRNKDGSWKADFDPASPHLFVEGSPAQYLWMLPFDGAGMS
HHHHHHCCCCCCCCCCCEEECCCCCCCEECCCCCCCCEEEEECCCCCEEEEEEECCCCCH
ALLGGDAAMEARLDSHFIKPDGSYVLFRDDAFYADVSNQPSINSPWMYLHTGAAYKTQKV
HHHCCCHHHHHHHHHEEECCCCCEEEEECCEEEEECCCCCCCCCCEEEEECCCCHHHHHH
VRETLNTLWLPTPKGIPGQDDLGQMSSWYVFSALGLYPMLPGRAELVLAAPVFEAAEIGK
HHHHHHHEECCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCHHHHHCCE
LSIRAPGASNDRLYIDEVVLNGHPNLKSFISPEYIDHKTSLEFKLSDKPNPAFGQAKTDR
EEEECCCCCCCCEEEEEEEECCCCCHHHHCCCHHCCCCCCEEEEECCCCCCCCCCCCCCC
PPSFSLTGN
CCCEECCCC
>Mature Secondary Structure
MHIPRTLIGIAVSAALGAISLSGCSSEADTNRNQQANPATTAVNATTNANATAPNWIKQP
CCCCHHHHHHHHHHHHHHEEECCCCCCCCCCCCCCCCCCCEEEECCCCCCCCCCHHHHCC
VDFVDPLIGSQGVFNHRQAANVAVGASLPFGMFNFGPEHAYTEALLNESEGLKKRVLEEK
HHHHHHHCCCCCCCCCHHHCCEEEECCCCCCCCCCCCHHHHHHHHHCCCCHHHHHHHHHH
VRIPVSPGGYNYDATRVKGFSFTRLSGTGCLGASGEVPVLPFLEPIKHSPDTDLMDTYYS
HCCCCCCCCCCCCCCEECCEEEEEECCCCCCCCCCCCCCCCCHHHHCCCCCCHHHHHHHH
VGYSHANESVRPGSYRITLDNGVGVNLSATERSGIAEFAFPKDAAAKLLFRTAYNQLGSE
HHHHHCCCCCCCCEEEEEECCCCCEEEECCCCCCCCHHCCCHHHHHHHHHHHHHHHHCCC
KASTRFHPETGEITGSVTSGNFCGYLGEANRYSYYTLHFVAKLDVPVTSSGGWQDDKMRP
HHCCCCCCCCCCEEEEEECCCCEEECCCCCCEEEEEEEEEEEECCEECCCCCCCCCCCCC
GASYSEGGTGYGPKGVPELGKGSGLWLELDTSVQQKVTMRVGISYVSEANARQNLIAEQA
CCCCCCCCCCCCCCCCCCCCCCCCEEEEECCCHHHHHHHHHHHHHHHHCCHHHHHHHHHH
HKDFAAVEAAANQRWNDTLAKVAVAADPVDAKNRLTTFYTALYHALHHPNLFSDVNGEYT
HHHHHHHHHHHCCCHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHCCCCCHHCCCCCCC
GFDGTVHRLSQGQQAQYANYSLWDVYRSQLQLISLMEPKVGSDMAQSMLNQANQYGGVWD
CCCHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCCCC
RWTHNSGPTSVMSGDPSTIAIANFVAFGADDFAVKEAYQSLYKAATEPTQFDLGNTGCPV
CCCCCCCCCCEECCCCCEEEEEHHHHCCCCHHHHHHHHHHHHHHCCCCCEECCCCCCCCE
FCRGQRPSLDQWLSLNYISDQSNSWEGASETLEQVSADFALSQLAARLGKQSQSDEMLAR
EECCCCCCHHHHEEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHH
AGYWKNLYNPKATDKLGYIQGRNKDGSWKADFDPASPHLFVEGSPAQYLWMLPFDGAGMS
HHHHHHCCCCCCCCCCCEEECCCCCCCEECCCCCCCCEEEEECCCCCEEEEEEECCCCCH
ALLGGDAAMEARLDSHFIKPDGSYVLFRDDAFYADVSNQPSINSPWMYLHTGAAYKTQKV
HHHCCCHHHHHHHHHEEECCCCCEEEEECCEEEEECCCCCCCCCCEEEEECCCCHHHHHH
VRETLNTLWLPTPKGIPGQDDLGQMSSWYVFSALGLYPMLPGRAELVLAAPVFEAAEIGK
HHHHHHHEECCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCHHHHHCCE
LSIRAPGASNDRLYIDEVVLNGHPNLKSFISPEYIDHKTSLEFKLSDKPNPAFGQAKTDR
EEEECCCCCCCCEEEEEEEECCCCCHHHHCCCHHCCCCCCEEEEECCCCCCCCCCCCCCC
PPSFSLTGN
CCCEECCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA