| Definition | Shewanella amazonensis SB2B chromosome, complete genome. |
|---|---|
| Accession | NC_008700 |
| Length | 4,306,142 |
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The map label for this gene is cutA [H]
Identifier: 119773679
GI number: 119773679
Start: 665065
End: 665397
Strand: Reverse
Name: cutA [H]
Synonym: Sama_0539
Alternate gene names: 119773679
Gene position: 665397-665065 (Counterclockwise)
Preceding gene: 119773681
Following gene: 119773678
Centisome position: 15.45
GC content: 54.35
Gene sequence:
>333_bases ATGGCACAGTCCATGGATGACTATATCCTGGTTATGACCACCTGCCCCTCAGAGGATGTCGGCCTTGCCATTGCCAAACG TCTGGTGAGCAACAGCCTTGCTGCCTGTGTGCAGCAGGGTGGCCCTGTGACGTCGGTGTACCATTGGCAAGGGAAACTCT GTGAAGACAGGGAATATCCCTTATTCATCAAGACCCGGCGGGCACTGTATGCCGAGGTGGAACGGGCGATTTCTGAGCTG CATCCCTATGAGTTGCCTGAGATTATCGCGACGCCCGTAACCGAGGCCCTGCCCGGCTATTTGAACTGGATAAACGACAA TACACAATCATGA
Upstream 100 bases:
>100_bases TCTTAATGCAAGAGTCAGACAAAACACGTAAAGTGTTTGCCAACCTGAGCTTAAGGCTAACTTAGCAGCCTTAAGGGAGT TTTAAACCTTGGGAGAGATC
Downstream 100 bases:
>100_bases AAAAAATCATCACCCTGCTGTTTAGTTGTCTGCTGTTATTGGCCCCATCGACCCATGCCAATGATATTTTTGGTAAAAAA TTCGATTTCCTCAAGGGCGA
Product: periplasmic divalent cation tolerance protein CutA
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 110; Mature: 109
Protein sequence:
>110_residues MAQSMDDYILVMTTCPSEDVGLAIAKRLVSNSLAACVQQGGPVTSVYHWQGKLCEDREYPLFIKTRRALYAEVERAISEL HPYELPEIIATPVTEALPGYLNWINDNTQS
Sequences:
>Translated_110_residues MAQSMDDYILVMTTCPSEDVGLAIAKRLVSNSLAACVQQGGPVTSVYHWQGKLCEDREYPLFIKTRRALYAEVERAISEL HPYELPEIIATPVTEALPGYLNWINDNTQS >Mature_109_residues AQSMDDYILVMTTCPSEDVGLAIAKRLVSNSLAACVQQGGPVTSVYHWQGKLCEDREYPLFIKTRRALYAEVERAISELH PYELPEIIATPVTEALPGYLNWINDNTQS
Specific function: Involved in resistance toward heavy metals [H]
COG id: COG1324
COG function: function code P; Uncharacterized protein involved in tolerance to divalent cations
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the CutA family [H]
Homologues:
Organism=Homo sapiens, GI62198241, Length=99, Percent_Identity=40.4040404040404, Blast_Score=82, Evalue=8e-17, Organism=Homo sapiens, GI62526024, Length=99, Percent_Identity=40.4040404040404, Blast_Score=82, Evalue=1e-16, Organism=Homo sapiens, GI62526022, Length=99, Percent_Identity=40.4040404040404, Blast_Score=82, Evalue=1e-16, Organism=Homo sapiens, GI7706244, Length=99, Percent_Identity=40.4040404040404, Blast_Score=82, Evalue=1e-16, Organism=Homo sapiens, GI62526026, Length=99, Percent_Identity=40.4040404040404, Blast_Score=82, Evalue=1e-16, Organism=Escherichia coli, GI1790579, Length=97, Percent_Identity=31.9587628865979, Blast_Score=67, Evalue=3e-13, Organism=Caenorhabditis elegans, GI32565476, Length=102, Percent_Identity=35.2941176470588, Blast_Score=75, Evalue=5e-15, Organism=Drosophila melanogaster, GI24641937, Length=95, Percent_Identity=37.8947368421053, Blast_Score=78, Evalue=1e-15,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR004323 - InterPro: IPR011322 [H]
Pfam domain/function: PF03091 CutA1 [H]
EC number: NA
Molecular weight: Translated: 12317; Mature: 12186
Theoretical pI: Translated: 4.45; Mature: 4.45
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.7 %Cys (Translated Protein) 2.7 %Met (Translated Protein) 5.5 %Cys+Met (Translated Protein) 2.8 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 4.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAQSMDDYILVMTTCPSEDVGLAIAKRLVSNSLAACVQQGGPVTSVYHWQGKLCEDREYP CCCCCCCEEEEEEECCCCCHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCCCCC LFIKTRRALYAEVERAISELHPYELPEIIATPVTEALPGYLNWINDNTQS EEEHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCC >Mature Secondary Structure AQSMDDYILVMTTCPSEDVGLAIAKRLVSNSLAACVQQGGPVTSVYHWQGKLCEDREYP CCCCCCEEEEEEECCCCCHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCCCCC LFIKTRRALYAEVERAISELHPYELPEIIATPVTEALPGYLNWINDNTQS EEEHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA