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The map label for this gene is 119773596

Identifier: 119773596

GI number: 119773596

Start: 562057

End: 563256

Strand: Direct

Name: 119773596

Synonym: Sama_0456

Alternate gene names: NA

Gene position: 562057-563256 (Clockwise)

Preceding gene: 119773595

Following gene: 119773597

Centisome position: 13.05

GC content: 55.92

Gene sequence:

>1200_bases
ATGAGCGTCATCAATCAAATGCTGAAAGATTTGGATAAGCGTGCCGAGCCGCATCAGCTGCAGCAGCTGCCATCCACTGT
GGCCATTCCAGTGAACAAATCTCCCGGGCTGCCCTGGCGTTGGCTTATCCTGCTGTCGCTGCTCCTTGTTGCCATCGCGC
TGGTGCTTTGGAACCTGAAAGCATCCAATGCCAAAGACGCTATGGTATTAAGCCCTATGGTTTCAGGACAGCAAGCTGAG
TTAAACACAGCAAGTGCTGCGCCGGTAAAAATGGAACCTGCGAGCAATGCTCAGGTGTCACATGTTCAGGAGCCCGCAGA
TGCCAGCAGCGACACAGCGTCGGGCTTGGCGAAAGAGCCCGCGGGCGAGTCAGATAAATCAATCAAAGACACGACGGGGA
ATGGCGAGTCTGAAACCTTAGCCGAGTCAGTGGCAGTATCATTCGCAGGATCAGCAAACGCGCCTGCCCCGTCAGAAACG
TCAGTTGCAGGCGAGGCAACTGTACTGGCTTTGCAAGTCAATACCTCGAGCGAGCCGCCGGTGATTGACTCTTCCAGCGT
CGCCATGAATACCAATACGCCATCCGCAGGCAGCATGGCTGTCACCGAAGTGGTGCTGCCCCCGGCAGAGCAAGCCGATC
GCGCCATGCTAAAGGCCAATGGAGCTAGGGATGCAGGCAAGCTGGATGAGGCGATGCGCCAATACGCCATGGCGCTTTCT
TATGAGCCCGCGCGCCATGAAGCAAGACGCCAATTGGCGGCGCTTCACTATGGTCAGGGGCAAGCAGGCGAAGCCATCAA
ACTGCTCGAGCGTGGGTTGGTGCAATTCCCTGAGCAGTCGTCTTTTGCACTACTTCTGGGCCGTTTGTGGCGGGAACAGG
GCAATAAATCGCAGGCGCTGGCAGCCCTTGATGTCATTGGGGATACAGATTCTCTTTCTCGGGATAAGTGGCTATTGGTG
GCCGATATTGCCCGTGAACAAGACGATCACGCGCTGGCCGAAGCCGCCTACCAAAAGTTGTTGGGCACCGGTATGGAAAA
AGCACAATGGTGGTTGGGGCTTGCCTACGCACAGGATGCACAGGGCAAGATGGCAGATGCCCGTTATCACTATCAGCGTG
CCCTTGGCACTGCCGGGTTATCATCCGACGCCCGCGCCTACATAGAAAACAGATTGATGCAGTTGGGAGATAACCAATGA

Upstream 100 bases:

>100_bases
AAGATGCATCCAAACCAATCTGGCCCAATTGGTTGCCGGTTCTCAGTCTGAGCTGCCTGATGGCTGCAGCCATGGGTTTG
TGGTGGCGCGGGGGCGGTTT

Downstream 100 bases:

>100_bases
AACCAAAACTCAAGATGCGCCTTGGGGATTTACTGGTCTCGGAACAAATCATTGGTGAGGATCAGCTGACCGCTGCACTT
GCGCAGCAAAAGAGCACCGG

Product: MSHA biogenesis protein MshN

Products: NA

Alternate protein names: MSHA Biogenesis Protein MshN; Mannose-Sensitive Agglutinin; TPR Domain-Containing Protein; Type IV Pilus Mannose-Sensitive Hemagglutinin D; Tetratricopeptide Repeat Domain Protein

Number of amino acids: Translated: 399; Mature: 398

Protein sequence:

>399_residues
MSVINQMLKDLDKRAEPHQLQQLPSTVAIPVNKSPGLPWRWLILLSLLLVAIALVLWNLKASNAKDAMVLSPMVSGQQAE
LNTASAAPVKMEPASNAQVSHVQEPADASSDTASGLAKEPAGESDKSIKDTTGNGESETLAESVAVSFAGSANAPAPSET
SVAGEATVLALQVNTSSEPPVIDSSSVAMNTNTPSAGSMAVTEVVLPPAEQADRAMLKANGARDAGKLDEAMRQYAMALS
YEPARHEARRQLAALHYGQGQAGEAIKLLERGLVQFPEQSSFALLLGRLWREQGNKSQALAALDVIGDTDSLSRDKWLLV
ADIAREQDDHALAEAAYQKLLGTGMEKAQWWLGLAYAQDAQGKMADARYHYQRALGTAGLSSDARAYIENRLMQLGDNQ

Sequences:

>Translated_399_residues
MSVINQMLKDLDKRAEPHQLQQLPSTVAIPVNKSPGLPWRWLILLSLLLVAIALVLWNLKASNAKDAMVLSPMVSGQQAE
LNTASAAPVKMEPASNAQVSHVQEPADASSDTASGLAKEPAGESDKSIKDTTGNGESETLAESVAVSFAGSANAPAPSET
SVAGEATVLALQVNTSSEPPVIDSSSVAMNTNTPSAGSMAVTEVVLPPAEQADRAMLKANGARDAGKLDEAMRQYAMALS
YEPARHEARRQLAALHYGQGQAGEAIKLLERGLVQFPEQSSFALLLGRLWREQGNKSQALAALDVIGDTDSLSRDKWLLV
ADIAREQDDHALAEAAYQKLLGTGMEKAQWWLGLAYAQDAQGKMADARYHYQRALGTAGLSSDARAYIENRLMQLGDNQ
>Mature_398_residues
SVINQMLKDLDKRAEPHQLQQLPSTVAIPVNKSPGLPWRWLILLSLLLVAIALVLWNLKASNAKDAMVLSPMVSGQQAEL
NTASAAPVKMEPASNAQVSHVQEPADASSDTASGLAKEPAGESDKSIKDTTGNGESETLAESVAVSFAGSANAPAPSETS
VAGEATVLALQVNTSSEPPVIDSSSVAMNTNTPSAGSMAVTEVVLPPAEQADRAMLKANGARDAGKLDEAMRQYAMALSY
EPARHEARRQLAALHYGQGQAGEAIKLLERGLVQFPEQSSFALLLGRLWREQGNKSQALAALDVIGDTDSLSRDKWLLVA
DIAREQDDHALAEAAYQKLLGTGMEKAQWWLGLAYAQDAQGKMADARYHYQRALGTAGLSSDARAYIENRLMQLGDNQ

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 42507; Mature: 42376

Theoretical pI: Translated: 4.77; Mature: 4.77

Prosite motif: PS50293 TPR_REGION

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.3 %Met     (Translated Protein)
3.3 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.0 %Met     (Mature Protein)
3.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSVINQMLKDLDKRAEPHQLQQLPSTVAIPVNKSPGLPWRWLILLSLLLVAIALVLWNLK
CHHHHHHHHHHHHCCCHHHHHHCCCEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHCCC
ASNAKDAMVLSPMVSGQQAELNTASAAPVKMEPASNAQVSHVQEPADASSDTASGLAKEP
CCCCCCCEEECHHCCCCCCCCCCCCCCCEEECCCCCCCHHHCCCCCCCCCCHHHCCCCCC
AGESDKSIKDTTGNGESETLAESVAVSFAGSANAPAPSETSVAGEATVLALQVNTSSEPP
CCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCEEEEEEEECCCCCCC
VIDSSSVAMNTNTPSAGSMAVTEVVLPPAEQADRAMLKANGARDAGKLDEAMRQYAMALS
CCCCCCEEEECCCCCCCCEEEEEEECCCHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHC
YEPARHEARRQLAALHYGQGQAGEAIKLLERGLVQFPEQSSFALLLGRLWREQGNKSQAL
CCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCHHHHH
AALDVIGDTDSLSRDKWLLVADIAREQDDHALAEAAYQKLLGTGMEKAQWWLGLAYAQDA
HHHHHHCCCCCCCCCCEEEEEHHHCCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCC
QGKMADARYHYQRALGTAGLSSDARAYIENRLMQLGDNQ
CCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCC
>Mature Secondary Structure 
SVINQMLKDLDKRAEPHQLQQLPSTVAIPVNKSPGLPWRWLILLSLLLVAIALVLWNLK
HHHHHHHHHHHHCCCHHHHHHCCCEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHCCC
ASNAKDAMVLSPMVSGQQAELNTASAAPVKMEPASNAQVSHVQEPADASSDTASGLAKEP
CCCCCCCEEECHHCCCCCCCCCCCCCCCEEECCCCCCCHHHCCCCCCCCCCHHHCCCCCC
AGESDKSIKDTTGNGESETLAESVAVSFAGSANAPAPSETSVAGEATVLALQVNTSSEPP
CCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCEEEEEEEECCCCCCC
VIDSSSVAMNTNTPSAGSMAVTEVVLPPAEQADRAMLKANGARDAGKLDEAMRQYAMALS
CCCCCCEEEECCCCCCCCEEEEEEECCCHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHC
YEPARHEARRQLAALHYGQGQAGEAIKLLERGLVQFPEQSSFALLLGRLWREQGNKSQAL
CCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCHHHHH
AALDVIGDTDSLSRDKWLLVADIAREQDDHALAEAAYQKLLGTGMEKAQWWLGLAYAQDA
HHHHHHCCCCCCCCCCEEEEEHHHCCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCC
QGKMADARYHYQRALGTAGLSSDARAYIENRLMQLGDNQ
CCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA