Definition | Shewanella amazonensis SB2B chromosome, complete genome. |
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Accession | NC_008700 |
Length | 4,306,142 |
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The map label for this gene is exeA [H]
Identifier: 119773595
GI number: 119773595
Start: 561158
End: 562060
Strand: Direct
Name: exeA [H]
Synonym: Sama_0455
Alternate gene names: 119773595
Gene position: 561158-562060 (Clockwise)
Preceding gene: 119773594
Following gene: 119773596
Centisome position: 13.03
GC content: 56.15
Gene sequence:
>903_bases GTGTATTTGCAGCACTTTGGTCTTCGGGAGATGCCGTTTGCGCTGACACCGAATACCGGATTTTTTTTCGCACTGGCGCC CCATGCAGAGGCGCTGCAAGTGCTGCAAACTGCCCTGCAAACCGGTGAAGGTTTTATCAAGGTCACCGGTGAGGTGGGCA CGGGTAAAACCCTGATTTTGAGAAAACTGCTCAACGATCTGCCCGCGCCGCTCCGCTGTGCCTATCTGCCCAATCCCTGT TTGTCGCCCAACGAGCTGCGCTGGGCGCTGGCATTGGAACTTGGCCTGAAATACTCCGCCAATATCGATCAGCAGCAGTT AACCAGTCTTATACAGCATCAACTGATGGCGCTGGCCGCCCATGGGCACAGCGTTGTGCTTATTCTGGACGAAGCCCAGG CATTGCCACAGGAGAGTTTGGAAACCTTAAGGCTGTTTACCAACCTGGAGACAGAGAGCCGCAAGCTCTTGCAGGTGGTG CTCTTTGGCCAGCCTGAATTGGATGAAAGGCTGGCAAGCCCTGAGCTTAGACAACTGCGGCAAAGGATCACCTTCAGCTA TCGTTTGCGCCCCCTCAACCGGCAAGAAATAGAGGCCTATGTGCAGCACAGACTAAAGGTGGCGGGGTTAAGCGATACAG GCCTTTTCGATAGCGCCGCCATAGCCGCCATCGCCAGGGCATCGAGAGGCATACCCAGGCTTATCAATATTCTGGCCCAC AAGGCGTTAATGCTGGGGTTTGGCGAGGGGCTGCAACGCATTGGACGCCGCCAGGCGCTGGGTGCCATAAGGGACACAGA AGATGCATCCAAACCAATCTGGCCCAATTGGTTGCCGGTTCTCAGTCTGAGCTGCCTGATGGCTGCAGCCATGGGTTTGT GGTGGCGCGGGGGCGGTTTATGA
Upstream 100 bases:
>100_bases ATACTGCTCAAACCAACCGTGGTCGTAAGCGGCACCTGGCAGAAAGAGCTGGAGCGGTCAAAGGCCTTGTTGGACCGTTG GTATCCCGAGGGCGAATAAG
Downstream 100 bases:
>100_bases GCGTCATCAATCAAATGCTGAAAGATTTGGATAAGCGTGCCGAGCCGCATCAGCTGCAGCAGCTGCCATCCACTGTGGCC ATTCCAGTGAACAAATCTCC
Product: MSHA biogenesis protein MshM
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 300; Mature: 300
Protein sequence:
>300_residues MYLQHFGLREMPFALTPNTGFFFALAPHAEALQVLQTALQTGEGFIKVTGEVGTGKTLILRKLLNDLPAPLRCAYLPNPC LSPNELRWALALELGLKYSANIDQQQLTSLIQHQLMALAAHGHSVVLILDEAQALPQESLETLRLFTNLETESRKLLQVV LFGQPELDERLASPELRQLRQRITFSYRLRPLNRQEIEAYVQHRLKVAGLSDTGLFDSAAIAAIARASRGIPRLINILAH KALMLGFGEGLQRIGRRQALGAIRDTEDASKPIWPNWLPVLSLSCLMAAAMGLWWRGGGL
Sequences:
>Translated_300_residues MYLQHFGLREMPFALTPNTGFFFALAPHAEALQVLQTALQTGEGFIKVTGEVGTGKTLILRKLLNDLPAPLRCAYLPNPC LSPNELRWALALELGLKYSANIDQQQLTSLIQHQLMALAAHGHSVVLILDEAQALPQESLETLRLFTNLETESRKLLQVV LFGQPELDERLASPELRQLRQRITFSYRLRPLNRQEIEAYVQHRLKVAGLSDTGLFDSAAIAAIARASRGIPRLINILAH KALMLGFGEGLQRIGRRQALGAIRDTEDASKPIWPNWLPVLSLSCLMAAAMGLWWRGGGL >Mature_300_residues MYLQHFGLREMPFALTPNTGFFFALAPHAEALQVLQTALQTGEGFIKVTGEVGTGKTLILRKLLNDLPAPLRCAYLPNPC LSPNELRWALALELGLKYSANIDQQQLTSLIQHQLMALAAHGHSVVLILDEAQALPQESLETLRLFTNLETESRKLLQVV LFGQPELDERLASPELRQLRQRITFSYRLRPLNRQEIEAYVQHRLKVAGLSDTGLFDSAAIAAIARASRGIPRLINILAH KALMLGFGEGLQRIGRRQALGAIRDTEDASKPIWPNWLPVLSLSCLMAAAMGLWWRGGGL
Specific function: Involved in a general secretion pathway (GSP) for the export of proteins [H]
COG id: COG3267
COG function: function code U; Type II secretory pathway, component ExeA (predicted ATPase)
Gene ontology:
Cell location: Cytoplasm. Cell membrane; Peripheral membrane protein [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the exeA family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003593 - InterPro: IPR003959 - InterPro: IPR002477 [H]
Pfam domain/function: PF00004 AAA; PF01471 PG_binding_1 [H]
EC number: NA
Molecular weight: Translated: 33310; Mature: 33310
Theoretical pI: Translated: 9.18; Mature: 9.18
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 3.0 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 3.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MYLQHFGLREMPFALTPNTGFFFALAPHAEALQVLQTALQTGEGFIKVTGEVGTGKTLIL CCCCCCCCCCCCEEECCCCCEEEEECCCHHHHHHHHHHHHCCCCEEEEECCCCCCHHHHH RKLLNDLPAPLRCAYLPNPCLSPNELRWALALELGLKYSANIDQQQLTSLIQHQLMALAA HHHHHHCCCCEEEEECCCCCCCCCHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHH HGHSVVLILDEAQALPQESLETLRLFTNLETESRKLLQVVLFGQPELDERLASPELRQLR CCCEEEEEECCCHHCCHHHHHHHHHHHCCCHHHHHHHHHHHCCCCCHHHHHCCHHHHHHH QRITFSYRLRPLNRQEIEAYVQHRLKVAGLSDTGLFDSAAIAAIARASRGIPRLINILAH HHCCHHEEECCCCHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHCCHHHHHHHHHH KALMLGFGEGLQRIGRRQALGAIRDTEDASKPIWPNWLPVLSLSCLMAAAMGLWWRGGGL HHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCC >Mature Secondary Structure MYLQHFGLREMPFALTPNTGFFFALAPHAEALQVLQTALQTGEGFIKVTGEVGTGKTLIL CCCCCCCCCCCCEEECCCCCEEEEECCCHHHHHHHHHHHHCCCCEEEEECCCCCCHHHHH RKLLNDLPAPLRCAYLPNPCLSPNELRWALALELGLKYSANIDQQQLTSLIQHQLMALAA HHHHHHCCCCEEEEECCCCCCCCCHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHH HGHSVVLILDEAQALPQESLETLRLFTNLETESRKLLQVVLFGQPELDERLASPELRQLR CCCEEEEEECCCHHCCHHHHHHHHHHHCCCHHHHHHHHHHHCCCCCHHHHHCCHHHHHHH QRITFSYRLRPLNRQEIEAYVQHRLKVAGLSDTGLFDSAAIAAIARASRGIPRLINILAH HHCCHHEEECCCCHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHCCHHHHHHHHHH KALMLGFGEGLQRIGRRQALGAIRDTEDASKPIWPNWLPVLSLSCLMAAAMGLWWRGGGL HHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 7961440 [H]