| Definition | Shewanella amazonensis SB2B chromosome, complete genome. |
|---|---|
| Accession | NC_008700 |
| Length | 4,306,142 |
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The map label for this gene is 119773573
Identifier: 119773573
GI number: 119773573
Start: 532806
End: 533057
Strand: Direct
Name: 119773573
Synonym: Sama_0433
Alternate gene names: NA
Gene position: 532806-533057 (Clockwise)
Preceding gene: 119773572
Following gene: 119773576
Centisome position: 12.37
GC content: 57.14
Gene sequence:
>252_bases ATGAACTGGCTGGCGATTTCCAAGCTGGGCTGCGGTCGTAAGCGGGCCGAAACTTTCCTTGAGCTGCAGCGCAAACGCTA TGGCCGAACGCCGCAACAGGCGGCGCTGTCGTTGTGGAAGGGGATTTGCACCGAGCCGTCGGCCAGGTGCATCGTTATGG ATCTGAAAAATCTATCCCGACAACCCCATCTCGGCGGCAGCGACAAGGCCTATTTACACGGGGTGCTCAATCATTTTGAG CACCTGTGTTGA
Upstream 100 bases:
>100_bases CGCCGATGCCATGCTGCTGGGGGCCGATACGGCGCTGTACCGGGCCAAGCGCGAAGGCAGAAACAAGATAATACTGTCGG ACTGAGCGGGGAGGGATGCC
Downstream 100 bases:
>100_bases AAGGGCGACAAGGGGTCTCAGCCCTTGAACACCTTGCCATCTTTCATCACGAAGCTGACATTCTCCAGCAGGCGGATATT GTCCAGTGGATTGCCATCTA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 83; Mature: 83
Protein sequence:
>83_residues MNWLAISKLGCGRKRAETFLELQRKRYGRTPQQAALSLWKGICTEPSARCIVMDLKNLSRQPHLGGSDKAYLHGVLNHFE HLC
Sequences:
>Translated_83_residues MNWLAISKLGCGRKRAETFLELQRKRYGRTPQQAALSLWKGICTEPSARCIVMDLKNLSRQPHLGGSDKAYLHGVLNHFE HLC >Mature_83_residues MNWLAISKLGCGRKRAETFLELQRKRYGRTPQQAALSLWKGICTEPSARCIVMDLKNLSRQPHLGGSDKAYLHGVLNHFE HLC
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 9450; Mature: 9450
Theoretical pI: Translated: 10.13; Mature: 10.13
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
4.8 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 7.2 %Cys+Met (Translated Protein) 4.8 %Cys (Mature Protein) 2.4 %Met (Mature Protein) 7.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNWLAISKLGCGRKRAETFLELQRKRYGRTPQQAALSLWKGICTEPSARCIVMDLKNLSR CCCCCCCCCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCCCCEEEEEHHHCCC QPHLGGSDKAYLHGVLNHFEHLC CCCCCCCCHHHHHHHHHHHHHCC >Mature Secondary Structure MNWLAISKLGCGRKRAETFLELQRKRYGRTPQQAALSLWKGICTEPSARCIVMDLKNLSR CCCCCCCCCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCCCCEEEEEHHHCCC QPHLGGSDKAYLHGVLNHFEHLC CCCCCCCCHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA