Definition Shewanella amazonensis SB2B chromosome, complete genome.
Accession NC_008700
Length 4,306,142

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The map label for this gene is 119773573

Identifier: 119773573

GI number: 119773573

Start: 532806

End: 533057

Strand: Direct

Name: 119773573

Synonym: Sama_0433

Alternate gene names: NA

Gene position: 532806-533057 (Clockwise)

Preceding gene: 119773572

Following gene: 119773576

Centisome position: 12.37

GC content: 57.14

Gene sequence:

>252_bases
ATGAACTGGCTGGCGATTTCCAAGCTGGGCTGCGGTCGTAAGCGGGCCGAAACTTTCCTTGAGCTGCAGCGCAAACGCTA
TGGCCGAACGCCGCAACAGGCGGCGCTGTCGTTGTGGAAGGGGATTTGCACCGAGCCGTCGGCCAGGTGCATCGTTATGG
ATCTGAAAAATCTATCCCGACAACCCCATCTCGGCGGCAGCGACAAGGCCTATTTACACGGGGTGCTCAATCATTTTGAG
CACCTGTGTTGA

Upstream 100 bases:

>100_bases
CGCCGATGCCATGCTGCTGGGGGCCGATACGGCGCTGTACCGGGCCAAGCGCGAAGGCAGAAACAAGATAATACTGTCGG
ACTGAGCGGGGAGGGATGCC

Downstream 100 bases:

>100_bases
AAGGGCGACAAGGGGTCTCAGCCCTTGAACACCTTGCCATCTTTCATCACGAAGCTGACATTCTCCAGCAGGCGGATATT
GTCCAGTGGATTGCCATCTA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 83; Mature: 83

Protein sequence:

>83_residues
MNWLAISKLGCGRKRAETFLELQRKRYGRTPQQAALSLWKGICTEPSARCIVMDLKNLSRQPHLGGSDKAYLHGVLNHFE
HLC

Sequences:

>Translated_83_residues
MNWLAISKLGCGRKRAETFLELQRKRYGRTPQQAALSLWKGICTEPSARCIVMDLKNLSRQPHLGGSDKAYLHGVLNHFE
HLC
>Mature_83_residues
MNWLAISKLGCGRKRAETFLELQRKRYGRTPQQAALSLWKGICTEPSARCIVMDLKNLSRQPHLGGSDKAYLHGVLNHFE
HLC

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 9450; Mature: 9450

Theoretical pI: Translated: 10.13; Mature: 10.13

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

4.8 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
7.2 %Cys+Met (Translated Protein)
4.8 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
7.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNWLAISKLGCGRKRAETFLELQRKRYGRTPQQAALSLWKGICTEPSARCIVMDLKNLSR
CCCCCCCCCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCCCCEEEEEHHHCCC
QPHLGGSDKAYLHGVLNHFEHLC
CCCCCCCCHHHHHHHHHHHHHCC
>Mature Secondary Structure
MNWLAISKLGCGRKRAETFLELQRKRYGRTPQQAALSLWKGICTEPSARCIVMDLKNLSR
CCCCCCCCCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCCCCEEEEEHHHCCC
QPHLGGSDKAYLHGVLNHFEHLC
CCCCCCCCHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA