Definition Shewanella amazonensis SB2B chromosome, complete genome.
Accession NC_008700
Length 4,306,142

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The map label for this gene is 119773551

Identifier: 119773551

GI number: 119773551

Start: 508106

End: 508321

Strand: Reverse

Name: 119773551

Synonym: Sama_0411

Alternate gene names: NA

Gene position: 508321-508106 (Counterclockwise)

Preceding gene: 119773553

Following gene: 119773549

Centisome position: 11.8

GC content: 38.43

Gene sequence:

>216_bases
ATGTTTCCAGAATACCGGGATCTGATTACCAGATTAAAAACCGAAGATGCGCATTTTTTAAAAATATTCAACGAGCACAA
TGAGCTGGATAAAGAAGTAAAGGAGTTGGAAAAACATCTTTCCAGTGATGCCACCCCAGAATTAAAAGTTTTGAAGCAAA
AGAAGCTGCACTTGAAAGAGGAACTGCAACAGATCCTCAAGTCATACGACAACTGA

Upstream 100 bases:

>100_bases
AAATAGTTCGACTTAGTGATCCGGATCACTTTTATCGCCATCAACTGGGCGTAGGGTTGATTTGAACCCAGGAGAAAACG
CACAGCAGAAGGAAGAGTAG

Downstream 100 bases:

>100_bases
TGTCCAACTGCCAGCTGGCTTCAAAAATAAAGGGTGCCTTAATGGCACCCTTCTTTTTGTATTACGGTTTCGCCGGAAAC
GCCGATTACAGGTAGTAATC

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 71; Mature: 71

Protein sequence:

>71_residues
MFPEYRDLITRLKTEDAHFLKIFNEHNELDKEVKELEKHLSSDATPELKVLKQKKLHLKEELQQILKSYDN

Sequences:

>Translated_71_residues
MFPEYRDLITRLKTEDAHFLKIFNEHNELDKEVKELEKHLSSDATPELKVLKQKKLHLKEELQQILKSYDN
>Mature_71_residues
MFPEYRDLITRLKTEDAHFLKIFNEHNELDKEVKELEKHLSSDATPELKVLKQKKLHLKEELQQILKSYDN

Specific function: Unknown

COG id: COG2841

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI87081906, Length=67, Percent_Identity=44.7761194029851, Blast_Score=63, Evalue=5e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 8578; Mature: 8578

Theoretical pI: Translated: 6.52; Mature: 6.52

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
1.4 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
1.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MFPEYRDLITRLKTEDAHFLKIFNEHNELDKEVKELEKHLSSDATPELKVLKQKKLHLKE
CCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHH
ELQQILKSYDN
HHHHHHHHHCC
>Mature Secondary Structure
MFPEYRDLITRLKTEDAHFLKIFNEHNELDKEVKELEKHLSSDATPELKVLKQKKLHLKE
CCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHH
ELQQILKSYDN
HHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA