Definition | Shewanella amazonensis SB2B chromosome, complete genome. |
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Accession | NC_008700 |
Length | 4,306,142 |
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The map label for this gene is elaA [H]
Identifier: 119773544
GI number: 119773544
Start: 502603
End: 503061
Strand: Direct
Name: elaA [H]
Synonym: Sama_0404
Alternate gene names: 119773544
Gene position: 502603-503061 (Clockwise)
Preceding gene: 119773543
Following gene: 119773545
Centisome position: 11.67
GC content: 53.38
Gene sequence:
>459_bases ATGATCCGCTGGCAAACACAGGCTTTTGCCGACCTCGACGCCCTGACGCTCTACCGTATATTGAAGCTCAGGGTCGATAT CTTTGTGGTAGAGCAGCATTGTCCCTATCCCGAACTCGACGACAAAGATTTGCATCCTCAGTCGATGCATCTGCTGGGTT GGCAGCAAGATACGCTGGTGGCCTATGCACGCGTACTGCCGCCGGGGCTCAGTTACCCCGAAGCCAGTATCGGTCGGGTT GCTGTGGCCGAATCGGTGCGCGGTAGTGGCATGGCAAGAGTGTTAATGAACAAAGCCATTCAACATGCTCTGCAAACATG GCCTGACGCCGGCATTCAAATTGGGGCGCAGGAATACCTGCAGGCGTTTTATACCTCACTTGGTTTTATACCAGCCTCCG ACGTTTACCTTGAAGATGGGATCCCCCATCTGGATATGCGCTTTCATCAAAGGACATGA
Upstream 100 bases:
>100_bases GTGTTGGTGGAAGTGGCTGTATGGCTAACTGTCCACGGCGGTGCTGCAAGGGGCTGATAGCGATGATAGACTGACCGCGG TCAATCATCCGGAGGCCCCT
Downstream 100 bases:
>100_bases GAAGATGACAAACTATGTGATTAACCGCCGCCAACTGGTGTGTGTGGCGAGCTTTTTAGCGTTTCCCGGCAAAGAAGAAG CCCTGATTGAGGCCCTGGGG
Product: acetyltransferase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 152; Mature: 152
Protein sequence:
>152_residues MIRWQTQAFADLDALTLYRILKLRVDIFVVEQHCPYPELDDKDLHPQSMHLLGWQQDTLVAYARVLPPGLSYPEASIGRV AVAESVRGSGMARVLMNKAIQHALQTWPDAGIQIGAQEYLQAFYTSLGFIPASDVYLEDGIPHLDMRFHQRT
Sequences:
>Translated_152_residues MIRWQTQAFADLDALTLYRILKLRVDIFVVEQHCPYPELDDKDLHPQSMHLLGWQQDTLVAYARVLPPGLSYPEASIGRV AVAESVRGSGMARVLMNKAIQHALQTWPDAGIQIGAQEYLQAFYTSLGFIPASDVYLEDGIPHLDMRFHQRT >Mature_152_residues MIRWQTQAFADLDALTLYRILKLRVDIFVVEQHCPYPELDDKDLHPQSMHLLGWQQDTLVAYARVLPPGLSYPEASIGRV AVAESVRGSGMARVLMNKAIQHALQTWPDAGIQIGAQEYLQAFYTSLGFIPASDVYLEDGIPHLDMRFHQRT
Specific function: Unknown
COG id: COG2153
COG function: function code R; Predicted acyltransferase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 N-acetyltransferase domain [H]
Homologues:
Organism=Escherichia coli, GI1788602, Length=146, Percent_Identity=46.5753424657534, Blast_Score=145, Evalue=8e-37,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000182 - InterPro: IPR016181 [H]
Pfam domain/function: PF00583 Acetyltransf_1 [H]
EC number: NA
Molecular weight: Translated: 17236; Mature: 17236
Theoretical pI: Translated: 5.90; Mature: 5.90
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 3.3 %Met (Translated Protein) 3.9 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 3.3 %Met (Mature Protein) 3.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MIRWQTQAFADLDALTLYRILKLRVDIFVVEQHCPYPELDDKDLHPQSMHLLGWQQDTLV CCCCCCHHHHHHHHHHHHHHHHHHHHEEEEECCCCCCCCCCCCCCCCHHHHCCCCHHHHH AYARVLPPGLSYPEASIGRVAVAESVRGSGMARVLMNKAIQHALQTWPDAGIQIGAQEYL HHHHHCCCCCCCCCCCCCHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCCCEEECHHHHH QAFYTSLGFIPASDVYLEDGIPHLDMRFHQRT HHHHHHHCCCCCCCEEECCCCCCCCCCCCCCC >Mature Secondary Structure MIRWQTQAFADLDALTLYRILKLRVDIFVVEQHCPYPELDDKDLHPQSMHLLGWQQDTLV CCCCCCHHHHHHHHHHHHHHHHHHHHEEEEECCCCCCCCCCCCCCCCHHHHCCCCHHHHH AYARVLPPGLSYPEASIGRVAVAESVRGSGMARVLMNKAIQHALQTWPDAGIQIGAQEYL HHHHHCCCCCCCCCCCCCHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCCCEEECHHHHH QAFYTSLGFIPASDVYLEDGIPHLDMRFHQRT HHHHHHHCCCCCCCEEECCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9205837; 9278503; 8549818 [H]