| Definition | Shewanella amazonensis SB2B chromosome, complete genome. |
|---|---|
| Accession | NC_008700 |
| Length | 4,306,142 |
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The map label for this gene is argA [H]
Identifier: 119773471
GI number: 119773471
Start: 395962
End: 397284
Strand: Direct
Name: argA [H]
Synonym: Sama_0330
Alternate gene names: 119773471
Gene position: 395962-397284 (Clockwise)
Preceding gene: 119773470
Following gene: 119773472
Centisome position: 9.2
GC content: 55.48
Gene sequence:
>1323_bases GTGCGAACTACCGAATTGGTTGACGGTTTTCGTCATTCCGCCCCCTATGTAAATGCTCACCGCGGCAAGACATTTGTTGT CATGCTGGGCGGCGAAGCCATGGTACAACCCCAATTTCGCGCCATCATCAACGATGTGGCCTTGCTGCACAGCTTGGGGA TCCGTATCGTGCTGGTGTACGGTGCCAGGCCGCAGATTGATGCGGCGCTTGAGCTGCATGGCATTGCGCCTGCCTACCAC AACGGGGTACGCATCACCGATGAAGATACTCTGAAGGTGATCAAGCAGGTTGCCGGAGCGCTCCAATTCGACATTACTGC ACGGCTTTCCATGAGTCTGTCCAATACTCCCATGCAGGGCACGCAGCTGAACGTTGTCAGCGGCAACTTTGTGATTGCCC AGCCGCTGGGCGTGGAAGATGGGGTGGATTTTTGCCTGTCTGGCCGGGTGCGTCGTATCGACGTGAATGGGCTTAAGCAT CAGCTCGACAGCCGCGGTATTGTGCTGATGGGGCCGATTGCTGCCTCGGTTACCGGTGAAAGTTTTAACCTGACGGCCGA GGAAGTAGCCACTCAGGTGGCGGTGAAGCTCAAAGCCGATAAGATGATAGGGTTCAGCTCACAGAACGGTATTCTGGATC GTAACGGCGAAGTGATTGCCGAGCTGATGCCAAACGATGCCCAGAAGATTTTCGCCAAGATGCAGGAAGGCGGTCAGGCC TGCGTCGGTACCCTGGCGTTTTTGAAGGCGAGCATTGATGCCTGCCGCAATGGGGTACCACGTTGCCATCTGGTGAGCTA TCTCGAAGATGGTGCCTTGCTGCAAGAGCTATTCTCCCGTGATGGCATAGGTACACAAATCGTGACCGAAAGCGCCGAGC GTCTGCGCCGCGCATCGATTGCCGATATTGGTGGCATTCTTAACCTGATCCGCCCAATGGAAGAGCAGGGCATTCTGGTG CGCCGTTCCCGCGAGCAGCTCGAGATGGAAATCGAGCAGTTTATGGTTATTGAACGGGACGGTCTGGTTATCGGCTGCGC CGCGCTGTATCCCTTTGAAGAAGACAATGCCGGTGAGTTTGCCTGCCTGGTGGTGCATCCTGATTACCGCGATGCCGACC GGGGGAGTTTGCTGCTCAAGAACATCATAGGCCAGGCAAGGGTGAGGGGCTATGCCCGCCTGTTTGCGCTTACCACCCGC AGTATTCACTGGTTCCTGGAGCACGGCTTTGAGTTGGTGGAGGTAGAGGCCTTACCGACCAAGAAAAAGCAGCTTTACAA CTATCAACGTCGCTCAAAAATTCTCGCATTGGATCTGCAATAA
Upstream 100 bases:
>100_bases ATAAATGCTTTAAATGTGAATTTAAATTCACTAAAATTGCGCAAGAATTCAACTTGGCGCAGTGTGTGCTGCGTCGGAGA CTGTGAGGACAAAACAGCCC
Downstream 100 bases:
>100_bases TCCTTCCTGCCGAAACAACCAGCCACATGGCTGGTTGTTTGTTTATTGCAGCTGCTAATTTGTCATTTGAGGTCTAATGC TCTTGACATATTATGTCTTT
Product: N-acetylglutamate synthase
Products: NA
Alternate protein names: N-acetylglutamate synthase; AGS; NAGS [H]
Number of amino acids: Translated: 440; Mature: 440
Protein sequence:
>440_residues MRTTELVDGFRHSAPYVNAHRGKTFVVMLGGEAMVQPQFRAIINDVALLHSLGIRIVLVYGARPQIDAALELHGIAPAYH NGVRITDEDTLKVIKQVAGALQFDITARLSMSLSNTPMQGTQLNVVSGNFVIAQPLGVEDGVDFCLSGRVRRIDVNGLKH QLDSRGIVLMGPIAASVTGESFNLTAEEVATQVAVKLKADKMIGFSSQNGILDRNGEVIAELMPNDAQKIFAKMQEGGQA CVGTLAFLKASIDACRNGVPRCHLVSYLEDGALLQELFSRDGIGTQIVTESAERLRRASIADIGGILNLIRPMEEQGILV RRSREQLEMEIEQFMVIERDGLVIGCAALYPFEEDNAGEFACLVVHPDYRDADRGSLLLKNIIGQARVRGYARLFALTTR SIHWFLEHGFELVEVEALPTKKKQLYNYQRRSKILALDLQ
Sequences:
>Translated_440_residues MRTTELVDGFRHSAPYVNAHRGKTFVVMLGGEAMVQPQFRAIINDVALLHSLGIRIVLVYGARPQIDAALELHGIAPAYH NGVRITDEDTLKVIKQVAGALQFDITARLSMSLSNTPMQGTQLNVVSGNFVIAQPLGVEDGVDFCLSGRVRRIDVNGLKH QLDSRGIVLMGPIAASVTGESFNLTAEEVATQVAVKLKADKMIGFSSQNGILDRNGEVIAELMPNDAQKIFAKMQEGGQA CVGTLAFLKASIDACRNGVPRCHLVSYLEDGALLQELFSRDGIGTQIVTESAERLRRASIADIGGILNLIRPMEEQGILV RRSREQLEMEIEQFMVIERDGLVIGCAALYPFEEDNAGEFACLVVHPDYRDADRGSLLLKNIIGQARVRGYARLFALTTR SIHWFLEHGFELVEVEALPTKKKQLYNYQRRSKILALDLQ >Mature_440_residues MRTTELVDGFRHSAPYVNAHRGKTFVVMLGGEAMVQPQFRAIINDVALLHSLGIRIVLVYGARPQIDAALELHGIAPAYH NGVRITDEDTLKVIKQVAGALQFDITARLSMSLSNTPMQGTQLNVVSGNFVIAQPLGVEDGVDFCLSGRVRRIDVNGLKH QLDSRGIVLMGPIAASVTGESFNLTAEEVATQVAVKLKADKMIGFSSQNGILDRNGEVIAELMPNDAQKIFAKMQEGGQA CVGTLAFLKASIDACRNGVPRCHLVSYLEDGALLQELFSRDGIGTQIVTESAERLRRASIADIGGILNLIRPMEEQGILV RRSREQLEMEIEQFMVIERDGLVIGCAALYPFEEDNAGEFACLVVHPDYRDADRGSLLLKNIIGQARVRGYARLFALTTR SIHWFLEHGFELVEVEALPTKKKQLYNYQRRSKILALDLQ
Specific function: Arginine biosynthesis; first step. [C]
COG id: COG0548
COG function: function code E; Acetylglutamate kinase
Gene ontology:
Cell location: Cytoplasm (Probable) [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 N-acetyltransferase domain [H]
Homologues:
Organism=Escherichia coli, GI1789181, Length=438, Percent_Identity=65.0684931506849, Blast_Score=618, Evalue=1e-178, Organism=Saccharomyces cerevisiae, GI6320913, Length=291, Percent_Identity=23.0240549828179, Blast_Score=71, Evalue=4e-13,
Paralogues:
None
Copy number: 2,500 Molecules/Cell In: Glucose minimal media [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000182 - InterPro: IPR016181 - InterPro: IPR001048 - InterPro: IPR010167 [H]
Pfam domain/function: PF00696 AA_kinase; PF00583 Acetyltransf_1 [H]
EC number: =2.3.1.1 [H]
Molecular weight: Translated: 48452; Mature: 48452
Theoretical pI: Translated: 6.52; Mature: 6.52
Prosite motif: PS00290 IG_MHC
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 2.7 %Met (Translated Protein) 4.1 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 2.7 %Met (Mature Protein) 4.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRTTELVDGFRHSAPYVNAHRGKTFVVMLGGEAMVQPQFRAIINDVALLHSLGIRIVLVY CCCHHHHHHHHHCCCCEECCCCCEEEEEECCCEEECHHHHHHHHHHHHHHHCCEEEEEEE GARPQIDAALELHGIAPAYHNGVRITDEDTLKVIKQVAGALQFDITARLSMSLSNTPMQG CCCCCCCCEEEEECCCHHHCCCEEECCHHHHHHHHHHHHHEEEEEEEEEEEEECCCCCCC TQLNVVSGNFVIAQPLGVEDGVDFCLSGRVRRIDVNGLKHQLDSRGIVLMGPIAASVTGE CEEEEEECCEEEEECCCCCCCCHHHHCCCEEEEECCHHHHHHCCCCEEEECCEEEEECCC SFNLTAEEVATQVAVKLKADKMIGFSSQNGILDRNGEVIAELMPNDAQKIFAKMQEGGQA CCCCCHHHHHHHHHEEEEHHHEECCCCCCCCCCCCCCEEEECCCCHHHHHHHHHHHCCHH CVGTLAFLKASIDACRNGVPRCHLVSYLEDGALLQELFSRDGIGTQIVTESAERLRRASI HHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCHHHHHHHHCCCCCHHHHHHHHHHHHHHHH ADIGGILNLIRPMEEQGILVRRSREQLEMEIEQFMVIERDGLVIGCAALYPFEEDNAGEF HHHHHHHHHHCCHHHCCEEEECCHHHHHHHHHHHEEEECCCEEEEEEEECCCCCCCCCCE ACLVVHPDYRDADRGSLLLKNIIGQARVRGYARLFALTTRSIHWFLEHGFELVEVEALPT EEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCCC KKKQLYNYQRRSKILALDLQ HHHHHHHHHHHCEEEEEECC >Mature Secondary Structure MRTTELVDGFRHSAPYVNAHRGKTFVVMLGGEAMVQPQFRAIINDVALLHSLGIRIVLVY CCCHHHHHHHHHCCCCEECCCCCEEEEEECCCEEECHHHHHHHHHHHHHHHCCEEEEEEE GARPQIDAALELHGIAPAYHNGVRITDEDTLKVIKQVAGALQFDITARLSMSLSNTPMQG CCCCCCCCEEEEECCCHHHCCCEEECCHHHHHHHHHHHHHEEEEEEEEEEEEECCCCCCC TQLNVVSGNFVIAQPLGVEDGVDFCLSGRVRRIDVNGLKHQLDSRGIVLMGPIAASVTGE CEEEEEECCEEEEECCCCCCCCHHHHCCCEEEEECCHHHHHHCCCCEEEECCEEEEECCC SFNLTAEEVATQVAVKLKADKMIGFSSQNGILDRNGEVIAELMPNDAQKIFAKMQEGGQA CCCCCHHHHHHHHHEEEEHHHEECCCCCCCCCCCCCCEEEECCCCHHHHHHHHHHHCCHH CVGTLAFLKASIDACRNGVPRCHLVSYLEDGALLQELFSRDGIGTQIVTESAERLRRASI HHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCHHHHHHHHCCCCCHHHHHHHHHHHHHHHH ADIGGILNLIRPMEEQGILVRRSREQLEMEIEQFMVIERDGLVIGCAALYPFEEDNAGEF HHHHHHHHHHCCHHHCCEEEECCHHHHHHHHHHHEEEECCCEEEEEEEECCCCCCCCCCE ACLVVHPDYRDADRGSLLLKNIIGQARVRGYARLFALTTRSIHWFLEHGFELVEVEALPT EEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCCC KKKQLYNYQRRSKILALDLQ HHHHHHHHHHHCEEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 12368813 [H]