Definition Shewanella amazonensis SB2B chromosome, complete genome.
Accession NC_008700
Length 4,306,142

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The map label for this gene is 119773445

Identifier: 119773445

GI number: 119773445

Start: 369739

End: 372060

Strand: Direct

Name: 119773445

Synonym: Sama_0304

Alternate gene names: NA

Gene position: 369739-372060 (Clockwise)

Preceding gene: 119773444

Following gene: 119773446

Centisome position: 8.59

GC content: 54.69

Gene sequence:

>2322_bases
ATGAAAACAATAACTCTGAAAGAGGGCGCCCTGTCCTTACCACGTCTGACACCCTTGTTGTTAACCCCAACGCTGTTGAC
CTTCTCCTTACTCACGGCAGTGGGCTGTACGACTACCCACGGCACCTCAAATGCTCAGCAGGTGCACGCCGAGTCCCCGG
CGCAAAGCGAAGCCCTCAACCATGTGGATCCTTTTATCGGCACAGGTGGCCATGGTCACACCTTTCCCGGTGCTTTGGTC
CCCTTTGGCATGGTGCAGTTGAGCCCGGATAACCCATCCAAGGGCTGGGATTGGACCTCGGGTTATCACTATTCTGACGA
TACCTTGCTGGGCTTCAGCCACACCCACTTATCAGGCACTGGCGTGGGCGACATGCTGGATGTGCTGGTGATGCCCTTTC
GCGGCGACTTTCTGAGCCGCCCAAGAGACGACAAAGACCGTATCTTCACCCACTATGGCCATGACAAAGAGAGTGCGACG
CCGGGCTATTACAGCCTGTATTTGCCGGAAGAACAGGTGCAGGTGGAGCTGACCGCCTCCACCCGCGCCGGGGTTCACCG
CTACCGCTTTGATGGTGACACAGATGCAAAGCTATTGATTGATTTGGGTTATGCCCAAAACTACGACAAACCCGTGGTGA
CCTTCCTGCGGGTCGAAGATGAGCACACCTTAAGTGGTTATCGGTTATCTACCGGTTGGGCCAAAAATCAGCCGCTGTAT
TTTGTGGCGAAATTTGATCAGCCCTTCAGTCATCAACTCTACAGCGAAAACCAGCCCATCAAGGGTGAGCAGCTACAGGC
CGAAAAAGGCCGCATAGTGCTGAACTTTGGTTTTTCGTCGACCGGTTCTTTGTCGACCGGTTCTTCGTCGGCTGCTTCTT
CTGCCGAGAAAACTGCAAAAGTGGTGGAGGCCAGGGTCGCCCTGTCTTACACCAGCATTGCCGGTGCCAAGGCGAACCTG
AAGGCCGAAGTGGCCGACCTGAGCTTTGCCCAAATCAAAGCCAATGCCCGTCAGGCCTGGGCGCAGCAGCTTGGAAAGTT
CGAGGTTGAAGACGGCAACGAGGTCAACAAGACCAAGTTTTACACCGCGCTCTACCATGCCTTTGTCGCGCCCCAGGTAT
TCCATGATGTGGATGGCGCCTTTTTCGGTGCCGATGGTGCCGCCCATGCCAACCCGGGCTATGGCCGTTATTCATTGTTC
TCACTCTGGGACACCTTCAGGGCTCTGCATCCGCTGCTGACGGTCAGCAACCCCGAGCGGGTCGATGACATGGTCAAGTC
CATGCTGGGCTTTTATGACGAGACCGGGCTACTGCCCACCTGGGACCTGATGTCCAACGAAACCGACGTGATGATTGGAT
ACCATGCGGTGCCCGTGATTGTGGACGCCTATCTAAAGGGTTTAACAACCGCGGACCCAGAACACATCTACGCCGCCATC
AAGGCCTCGGCAATGCAGGATAGATTTGGCATCGACAAGTTCCGGGAATACGGCTTCGTGCCTTCGGATCTGGAAATTGA
GGCCGTGTCCAAAACCCTGGAATATGCCTTCGATGACTGGGCAATAGCACAAATGGCCAAAGCGCTTGGCAAAACTGAAG
ACTATCAGGTGTTCAATCAACGTGCTCAGAGCTACAAAACCCTGTTTGACGCTGAAACCGGCTTTATGCGCGGCAAGGAT
CATCAAGGTAACTGGGTAACGCCTTTCAATCCCACCTATGTGGAGCACCGCAACACCGACTACACCGAGGCCAATGCCTG
GCAGTACAGCTTCTTTGTGCCCCATGACGTACCGGGCCTAATGGCCTTGTACGGAAATGAGCAGCGCTTTGTGGCCAAAC
TGGATGAGCTTTTCTCCACCAGTTCTGAGATGCAGGGGGATGTATCCCCGGATATTTCAGGGCTTATTGGCCAATACGCC
CACGGCAATGAGCCTGTGCATCATGTTGCCTACCTGTATGCCTTTACCGATAAAAAGCAGCAAGGTGAAGCGCGTATCAA
AGAAATCCGTGACACCATGTATCTGGCGCAGCCCGATGGTCTGGCCGGAAACGATGACCTGGGTCAGATGTCGGCCTGGT
ATGTGTTCAGCGCTTTGGGCTTCTATCCGCTGAATCCCGTTGGCGGCGACTACGTACTCGGCACCCCTCAGTTCGCCAAA
GCGACCGTGATGCTGCCCAATGGCAAAGCGTTCAAGGTAATCAAGAAAGGCGAGGGATGGGTGAAGGCCCTGTGGCTTAA
TGGCAAAAAGCACGATAGCGCCATCCTCACCCATCAGCAGCTATTGGACGGCGGAGAACTGGTTTTCGAATTGGCTGAAT
AA

Upstream 100 bases:

>100_bases
TGGTTATCCAGCAATGGACTCAGGTGTGGGTGGCACTGGCACTGGCGATACTGACATCCTGGTTCCTGAAGAAAAACTGG
TTGGATAAGTTGAAAGATTA

Downstream 100 bases:

>100_bases
GCCGTAGTGACAGTCGCTGTGGGTTGGGCGCCCAATTGTTGATGAACGCTTTTGTGCGCCTTCCTCGTTTGCCAAATACA
GCAAACAACCCTAAACAGCT

Product: putative alpha-1,2-mannosidase

Products: NA

Alternate protein names: Alpha-1 2-Mannosidase Family Protein; Glycoside Hydrolase Family; Sugar Hydrolase; Glycosyl Hydrolase Family; Secreted Protein; Glycoside Hydrolase Family Protein; Outer Membrane Protein; Immunoreactive; Exported Alpha-1 2-Mannosidase; Antigen; Alpha-1 2-Mannosidase Protein; Lipoprotein

Number of amino acids: Translated: 773; Mature: 773

Protein sequence:

>773_residues
MKTITLKEGALSLPRLTPLLLTPTLLTFSLLTAVGCTTTHGTSNAQQVHAESPAQSEALNHVDPFIGTGGHGHTFPGALV
PFGMVQLSPDNPSKGWDWTSGYHYSDDTLLGFSHTHLSGTGVGDMLDVLVMPFRGDFLSRPRDDKDRIFTHYGHDKESAT
PGYYSLYLPEEQVQVELTASTRAGVHRYRFDGDTDAKLLIDLGYAQNYDKPVVTFLRVEDEHTLSGYRLSTGWAKNQPLY
FVAKFDQPFSHQLYSENQPIKGEQLQAEKGRIVLNFGFSSTGSLSTGSSSAASSAEKTAKVVEARVALSYTSIAGAKANL
KAEVADLSFAQIKANARQAWAQQLGKFEVEDGNEVNKTKFYTALYHAFVAPQVFHDVDGAFFGADGAAHANPGYGRYSLF
SLWDTFRALHPLLTVSNPERVDDMVKSMLGFYDETGLLPTWDLMSNETDVMIGYHAVPVIVDAYLKGLTTADPEHIYAAI
KASAMQDRFGIDKFREYGFVPSDLEIEAVSKTLEYAFDDWAIAQMAKALGKTEDYQVFNQRAQSYKTLFDAETGFMRGKD
HQGNWVTPFNPTYVEHRNTDYTEANAWQYSFFVPHDVPGLMALYGNEQRFVAKLDELFSTSSEMQGDVSPDISGLIGQYA
HGNEPVHHVAYLYAFTDKKQQGEARIKEIRDTMYLAQPDGLAGNDDLGQMSAWYVFSALGFYPLNPVGGDYVLGTPQFAK
ATVMLPNGKAFKVIKKGEGWVKALWLNGKKHDSAILTHQQLLDGGELVFELAE

Sequences:

>Translated_773_residues
MKTITLKEGALSLPRLTPLLLTPTLLTFSLLTAVGCTTTHGTSNAQQVHAESPAQSEALNHVDPFIGTGGHGHTFPGALV
PFGMVQLSPDNPSKGWDWTSGYHYSDDTLLGFSHTHLSGTGVGDMLDVLVMPFRGDFLSRPRDDKDRIFTHYGHDKESAT
PGYYSLYLPEEQVQVELTASTRAGVHRYRFDGDTDAKLLIDLGYAQNYDKPVVTFLRVEDEHTLSGYRLSTGWAKNQPLY
FVAKFDQPFSHQLYSENQPIKGEQLQAEKGRIVLNFGFSSTGSLSTGSSSAASSAEKTAKVVEARVALSYTSIAGAKANL
KAEVADLSFAQIKANARQAWAQQLGKFEVEDGNEVNKTKFYTALYHAFVAPQVFHDVDGAFFGADGAAHANPGYGRYSLF
SLWDTFRALHPLLTVSNPERVDDMVKSMLGFYDETGLLPTWDLMSNETDVMIGYHAVPVIVDAYLKGLTTADPEHIYAAI
KASAMQDRFGIDKFREYGFVPSDLEIEAVSKTLEYAFDDWAIAQMAKALGKTEDYQVFNQRAQSYKTLFDAETGFMRGKD
HQGNWVTPFNPTYVEHRNTDYTEANAWQYSFFVPHDVPGLMALYGNEQRFVAKLDELFSTSSEMQGDVSPDISGLIGQYA
HGNEPVHHVAYLYAFTDKKQQGEARIKEIRDTMYLAQPDGLAGNDDLGQMSAWYVFSALGFYPLNPVGGDYVLGTPQFAK
ATVMLPNGKAFKVIKKGEGWVKALWLNGKKHDSAILTHQQLLDGGELVFELAE
>Mature_773_residues
MKTITLKEGALSLPRLTPLLLTPTLLTFSLLTAVGCTTTHGTSNAQQVHAESPAQSEALNHVDPFIGTGGHGHTFPGALV
PFGMVQLSPDNPSKGWDWTSGYHYSDDTLLGFSHTHLSGTGVGDMLDVLVMPFRGDFLSRPRDDKDRIFTHYGHDKESAT
PGYYSLYLPEEQVQVELTASTRAGVHRYRFDGDTDAKLLIDLGYAQNYDKPVVTFLRVEDEHTLSGYRLSTGWAKNQPLY
FVAKFDQPFSHQLYSENQPIKGEQLQAEKGRIVLNFGFSSTGSLSTGSSSAASSAEKTAKVVEARVALSYTSIAGAKANL
KAEVADLSFAQIKANARQAWAQQLGKFEVEDGNEVNKTKFYTALYHAFVAPQVFHDVDGAFFGADGAAHANPGYGRYSLF
SLWDTFRALHPLLTVSNPERVDDMVKSMLGFYDETGLLPTWDLMSNETDVMIGYHAVPVIVDAYLKGLTTADPEHIYAAI
KASAMQDRFGIDKFREYGFVPSDLEIEAVSKTLEYAFDDWAIAQMAKALGKTEDYQVFNQRAQSYKTLFDAETGFMRGKD
HQGNWVTPFNPTYVEHRNTDYTEANAWQYSFFVPHDVPGLMALYGNEQRFVAKLDELFSTSSEMQGDVSPDISGLIGQYA
HGNEPVHHVAYLYAFTDKKQQGEARIKEIRDTMYLAQPDGLAGNDDLGQMSAWYVFSALGFYPLNPVGGDYVLGTPQFAK
ATVMLPNGKAFKVIKKGEGWVKALWLNGKKHDSAILTHQQLLDGGELVFELAE

Specific function: Unknown

COG id: COG3537

COG function: function code G; Putative alpha-1,2-mannosidase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 85520; Mature: 85520

Theoretical pI: Translated: 5.36; Mature: 5.36

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.1 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
2.2 %Cys+Met (Translated Protein)
0.1 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
2.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKTITLKEGALSLPRLTPLLLTPTLLTFSLLTAVGCTTTHGTSNAQQVHAESPAQSEALN
CCEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHEECCCCHHHHHHH
HVDPFIGTGGHGHTFPGALVPFGMVQLSPDNPSKGWDWTSGYHYSDDTLLGFSHTHLSGT
HCCCCCCCCCCCCCCCCHHHCCCEEEECCCCCCCCCCCCCCEEECCCEEEEEEECCCCCC
GVGDMLDVLVMPFRGDFLSRPRDDKDRIFTHYGHDKESATPGYYSLYLPEEQVQVELTAS
CHHHHHHHHHHCCCCHHHCCCCCCCCCEEEECCCCCCCCCCCEEEEECCCCCEEEEEEEC
TRAGVHRYRFDGDTDAKLLIDLGYAQNYDKPVVTFLRVEDEHTLSGYRLSTGWAKNQPLY
CCCCCEEEECCCCCCCEEEEEECCCCCCCCCEEEEEEECCCCCCCCEEEECCCCCCCCEE
FVAKFDQPFSHQLYSENQPIKGEQLQAEKGRIVLNFGFSSTGSLSTGSSSAASSAEKTAK
EEEECCCCHHHHHHCCCCCCCCCCEECCCCEEEEEECCCCCCCCCCCCCHHHHHHHHHHH
VVEARVALSYTSIAGAKANLKAEVADLSFAQIKANARQAWAQQLGKFEVEDGNEVNKTKF
HHHHHHHEEEHHHCCCCCCCEEEHHCCHHHHHHHHHHHHHHHHHCCEECCCCCCCCHHHH
YTALYHAFVAPQVFHDVDGAFFGADGAAHANPGYGRYSLFSLWDTFRALHPLLTVSNPER
HHHHHHHHHHHHHHHHCCCCEECCCCCCCCCCCCCCHHHHHHHHHHHHHHHHEECCCHHH
VDDMVKSMLGFYDETGLLPTWDLMSNETDVMIGYHAVPVIVDAYLKGLTTADPEHIYAAI
HHHHHHHHHHHHCCCCCCEEHHHCCCCCCEEEEHHHHHHHHHHHHHCCCCCCHHHHHHHH
KASAMQDRFGIDKFREYGFVPSDLEIEAVSKTLEYAFDDWAIAQMAKALGKTEDYQVFNQ
HHHHHHHHCCHHHHHHCCCCCCCCCHHHHHHHHHHHCCHHHHHHHHHHHCCCHHHHHHHH
RAQSYKTLFDAETGFMRGKDHQGNWVTPFNPTYVEHRNTDYTEANAWQYSFFVPHDVPGL
HHHHHHHHHCCCCCCCCCCCCCCCEECCCCCCEEECCCCCCCCCCCEEEEEECCCCCCCC
MALYGNEQRFVAKLDELFSTSSEMQGDVSPDISGLIGQYAHGNEPVHHVAYLYAFTDKKQ
EEEECCCHHHHHHHHHHHCCHHHCCCCCCCCHHHHHHHHCCCCCCHHHEEEEEEECCCCC
QGEARIKEIRDTMYLAQPDGLAGNDDLGQMSAWYVFSALGFYPLNPVGGDYVLGTPQFAK
CHHHHHHHHHHHHEEECCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCEEECCCCCCE
ATVMLPNGKAFKVIKKGEGWVKALWLNGKKHDSAILTHQQLLDGGELVFELAE
EEEECCCCCEEEEEECCCCEEEEEEECCCCCCHHHHHHHHHHCCCCEEEEECC
>Mature Secondary Structure
MKTITLKEGALSLPRLTPLLLTPTLLTFSLLTAVGCTTTHGTSNAQQVHAESPAQSEALN
CCEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHEECCCCHHHHHHH
HVDPFIGTGGHGHTFPGALVPFGMVQLSPDNPSKGWDWTSGYHYSDDTLLGFSHTHLSGT
HCCCCCCCCCCCCCCCCHHHCCCEEEECCCCCCCCCCCCCCEEECCCEEEEEEECCCCCC
GVGDMLDVLVMPFRGDFLSRPRDDKDRIFTHYGHDKESATPGYYSLYLPEEQVQVELTAS
CHHHHHHHHHHCCCCHHHCCCCCCCCCEEEECCCCCCCCCCCEEEEECCCCCEEEEEEEC
TRAGVHRYRFDGDTDAKLLIDLGYAQNYDKPVVTFLRVEDEHTLSGYRLSTGWAKNQPLY
CCCCCEEEECCCCCCCEEEEEECCCCCCCCCEEEEEEECCCCCCCCEEEECCCCCCCCEE
FVAKFDQPFSHQLYSENQPIKGEQLQAEKGRIVLNFGFSSTGSLSTGSSSAASSAEKTAK
EEEECCCCHHHHHHCCCCCCCCCCEECCCCEEEEEECCCCCCCCCCCCCHHHHHHHHHHH
VVEARVALSYTSIAGAKANLKAEVADLSFAQIKANARQAWAQQLGKFEVEDGNEVNKTKF
HHHHHHHEEEHHHCCCCCCCEEEHHCCHHHHHHHHHHHHHHHHHCCEECCCCCCCCHHHH
YTALYHAFVAPQVFHDVDGAFFGADGAAHANPGYGRYSLFSLWDTFRALHPLLTVSNPER
HHHHHHHHHHHHHHHHCCCCEECCCCCCCCCCCCCCHHHHHHHHHHHHHHHHEECCCHHH
VDDMVKSMLGFYDETGLLPTWDLMSNETDVMIGYHAVPVIVDAYLKGLTTADPEHIYAAI
HHHHHHHHHHHHCCCCCCEEHHHCCCCCCEEEEHHHHHHHHHHHHHCCCCCCHHHHHHHH
KASAMQDRFGIDKFREYGFVPSDLEIEAVSKTLEYAFDDWAIAQMAKALGKTEDYQVFNQ
HHHHHHHHCCHHHHHHCCCCCCCCCHHHHHHHHHHHCCHHHHHHHHHHHCCCHHHHHHHH
RAQSYKTLFDAETGFMRGKDHQGNWVTPFNPTYVEHRNTDYTEANAWQYSFFVPHDVPGL
HHHHHHHHHCCCCCCCCCCCCCCCEECCCCCCEEECCCCCCCCCCCEEEEEECCCCCCCC
MALYGNEQRFVAKLDELFSTSSEMQGDVSPDISGLIGQYAHGNEPVHHVAYLYAFTDKKQ
EEEECCCHHHHHHHHHHHCCHHHCCCCCCCCHHHHHHHHCCCCCCHHHEEEEEEECCCCC
QGEARIKEIRDTMYLAQPDGLAGNDDLGQMSAWYVFSALGFYPLNPVGGDYVLGTPQFAK
CHHHHHHHHHHHHEEECCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCEEECCCCCCE
ATVMLPNGKAFKVIKKGEGWVKALWLNGKKHDSAILTHQQLLDGGELVFELAE
EEEECCCCCEEEEEECCCCEEEEEEECCCCCCHHHHHHHHHHCCCCEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA