| Definition | Nocardioides sp. JS614 chromosome, complete genome. |
|---|---|
| Accession | NC_008699 |
| Length | 4,985,871 |
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The map label for this gene is ydcT [H]
Identifier: 119717441
GI number: 119717441
Start: 3415260
End: 3416318
Strand: Reverse
Name: ydcT [H]
Synonym: Noca_3217
Alternate gene names: 119717441
Gene position: 3416318-3415260 (Counterclockwise)
Preceding gene: 119717445
Following gene: 119717440
Centisome position: 68.52
GC content: 70.16
Gene sequence:
>1059_bases ATGGCGACGGCGATCTCCGTGCGGGGGCTGAGCAAGTACTTCGGTGACGTGCGCGCGGTGGACGATCTGGACCTCGACAT CGCCGACGGCGAGTTCTTCTCCATGCTCGGTCCCTCCGGCTCGGGGAAGACCACTGTCTTGCGCCTGATCGCCGGCTTCG AGGAGCCCAGCGCGGGAGTGATCATGCTCGGCGGCGAGGACGTGACCCGGCGGCCGCCGTTCGCCCGCGACGTCAACACG GTCTTCCAGGACTACGCGATCTTCCCTCACCTCAGCGTCCGCCAGAACGTCGAGTACGGGCTGCGGGTGAAGAAGGTCCC CGGTGCCGAACGCCGCCGCCGCGCCGAGCAGGCGCTGGCGACCATGCGCCTCGAGGGGTACGCCGAGCGCCGGCCGCACC AGCTCTCCGGCGGGCAGCGGCAACGTGTCGCGCTGGCCCGCGCGCTGGTGAACCGGCCGCAGGTGCTGCTCCTCGACGAG CCGCTGGGCGCCCTGGACCTCAAGCTGCGCCGCGAGATGCAGATCGAGCTGAAGGAGATCCAGCGCGAGGTCGGGATCAC GTTCGTCTTCGTCACCCACGACCAGGAGGAGGCGCTCACGATGAGCGACCGCATCGCGGTCTTCAACGAGGGCCGCATCG AGCAGCTCGCGAGCCCCGTCGAGCTCTACGAGCGGCCGGCCAGCGCGTTCGTCGCTGGCTTCGTCGGCACCTCCAACCTG CTCCAGGGTGACGTCGCACGTGACCTGGTCGGGGAGCCGGGCCCGTTCGTGATCCGGCCCGAGAAGCTGCAGCTGGTCGC CGAACCCGCTCGCGAGCCGGGTCTGGTGACGGCTCCCGGCGTGGTGCGCGAGGTCGTCTATCTCGGGGCGTCCACGATGT CGGTCGTCGAGCTCGAGGCCGGCCCCACGGTGACGGTGTCGCACCCGAACACCGACACCTCGATCGACGCCGCGCTCGAA CGACGCGACCAGCGCGTCGTCGTCACGTGGCGTCGTGACCACCTGGTGTCCCTGGGTTCCCCCGACCCAGCGGCGTCCCC TGAGGAGGAGACAGCATGA
Upstream 100 bases:
>100_bases CGTAAACCGAAGTCACAAGGCGATAACGACGTACTAAATCGTTGCGATCTAGCCCTGAGACGATGGAAATGCGTGGCGCA GCACCGCTACGTTGCCACCT
Downstream 100 bases:
>100_bases GACGGATCGGATCCACGCGGCTGGCGGCCGTGGCCTGCGCGAGCGTGCTCGCACTCGCCGCCTCCGCCTGCGGCACGAGC TCGGGAGACGGCGACGGAGG
Product: spermidine/putrescine ABC transporter ATPase subunit
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 352; Mature: 351
Protein sequence:
>352_residues MATAISVRGLSKYFGDVRAVDDLDLDIADGEFFSMLGPSGSGKTTVLRLIAGFEEPSAGVIMLGGEDVTRRPPFARDVNT VFQDYAIFPHLSVRQNVEYGLRVKKVPGAERRRRAEQALATMRLEGYAERRPHQLSGGQRQRVALARALVNRPQVLLLDE PLGALDLKLRREMQIELKEIQREVGITFVFVTHDQEEALTMSDRIAVFNEGRIEQLASPVELYERPASAFVAGFVGTSNL LQGDVARDLVGEPGPFVIRPEKLQLVAEPAREPGLVTAPGVVREVVYLGASTMSVVELEAGPTVTVSHPNTDTSIDAALE RRDQRVVVTWRRDHLVSLGSPDPAASPEEETA
Sequences:
>Translated_352_residues MATAISVRGLSKYFGDVRAVDDLDLDIADGEFFSMLGPSGSGKTTVLRLIAGFEEPSAGVIMLGGEDVTRRPPFARDVNT VFQDYAIFPHLSVRQNVEYGLRVKKVPGAERRRRAEQALATMRLEGYAERRPHQLSGGQRQRVALARALVNRPQVLLLDE PLGALDLKLRREMQIELKEIQREVGITFVFVTHDQEEALTMSDRIAVFNEGRIEQLASPVELYERPASAFVAGFVGTSNL LQGDVARDLVGEPGPFVIRPEKLQLVAEPAREPGLVTAPGVVREVVYLGASTMSVVELEAGPTVTVSHPNTDTSIDAALE RRDQRVVVTWRRDHLVSLGSPDPAASPEEETA >Mature_351_residues ATAISVRGLSKYFGDVRAVDDLDLDIADGEFFSMLGPSGSGKTTVLRLIAGFEEPSAGVIMLGGEDVTRRPPFARDVNTV FQDYAIFPHLSVRQNVEYGLRVKKVPGAERRRRAEQALATMRLEGYAERRPHQLSGGQRQRVALARALVNRPQVLLLDEP LGALDLKLRREMQIELKEIQREVGITFVFVTHDQEEALTMSDRIAVFNEGRIEQLASPVELYERPASAFVAGFVGTSNLL QGDVARDLVGEPGPFVIRPEKLQLVAEPAREPGLVTAPGVVREVVYLGASTMSVVELEAGPTVTVSHPNTDTSIDAALER RDQRVVVTWRRDHLVSLGSPDPAASPEEETA
Specific function: Probably part of a binding-protein-dependent transport system YdcSTUV. Probably responsible for energy coupling to the transport system [H]
COG id: COG3842
COG function: function code E; ABC-type spermidine/putrescine transport systems, ATPase components
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 ABC transporter domain [H]
Homologues:
Organism=Homo sapiens, GI150417984, Length=248, Percent_Identity=34.6774193548387, Blast_Score=120, Evalue=2e-27, Organism=Homo sapiens, GI27881501, Length=229, Percent_Identity=30.1310043668122, Blast_Score=108, Evalue=9e-24, Organism=Homo sapiens, GI30795238, Length=229, Percent_Identity=30.1310043668122, Blast_Score=108, Evalue=9e-24, Organism=Homo sapiens, GI47078218, Length=241, Percent_Identity=27.3858921161826, Blast_Score=101, Evalue=1e-21, Organism=Homo sapiens, GI45446740, Length=238, Percent_Identity=27.3109243697479, Blast_Score=101, Evalue=1e-21, Organism=Homo sapiens, GI42741659, Length=227, Percent_Identity=29.9559471365639, Blast_Score=100, Evalue=2e-21, Organism=Homo sapiens, GI4505771, Length=240, Percent_Identity=30, Blast_Score=100, Evalue=2e-21, Organism=Homo sapiens, GI9961252, Length=240, Percent_Identity=30, Blast_Score=100, Evalue=3e-21, Organism=Homo sapiens, GI171184400, Length=225, Percent_Identity=31.5555555555556, Blast_Score=99, Evalue=6e-21, Organism=Homo sapiens, GI116734710, Length=235, Percent_Identity=27.2340425531915, Blast_Score=97, Evalue=2e-20, Organism=Homo sapiens, GI27262624, Length=229, Percent_Identity=28.3842794759825, Blast_Score=96, Evalue=4e-20, Organism=Homo sapiens, GI27262626, Length=229, Percent_Identity=28.3842794759825, Blast_Score=96, Evalue=4e-20, Organism=Homo sapiens, GI9961250, Length=222, Percent_Identity=28.8288288288288, Blast_Score=96, Evalue=5e-20, Organism=Homo sapiens, GI105990541, Length=222, Percent_Identity=28.3783783783784, Blast_Score=95, Evalue=9e-20, Organism=Homo sapiens, GI21536376, Length=218, Percent_Identity=28.8990825688073, Blast_Score=94, Evalue=2e-19, Organism=Homo sapiens, GI255708477, Length=222, Percent_Identity=31.981981981982, Blast_Score=93, Evalue=4e-19, Organism=Homo sapiens, GI148612844, Length=222, Percent_Identity=31.981981981982, Blast_Score=92, Evalue=5e-19, Organism=Homo sapiens, GI31657092, Length=226, Percent_Identity=28.3185840707965, Blast_Score=92, Evalue=1e-18, Organism=Homo sapiens, GI27436953, Length=229, Percent_Identity=25.764192139738, Blast_Score=92, Evalue=1e-18, Organism=Homo sapiens, GI21536378, Length=224, Percent_Identity=29.4642857142857, Blast_Score=91, Evalue=1e-18, Organism=Homo sapiens, GI27477115, Length=229, Percent_Identity=26.6375545851528, Blast_Score=91, Evalue=2e-18, Organism=Homo sapiens, GI153792144, Length=229, Percent_Identity=27.0742358078603, Blast_Score=89, Evalue=5e-18, Organism=Homo sapiens, GI156105685, Length=215, Percent_Identity=32.5581395348837, Blast_Score=89, Evalue=5e-18, Organism=Homo sapiens, GI9955963, Length=204, Percent_Identity=31.3725490196078, Blast_Score=88, Evalue=1e-17, Organism=Homo sapiens, GI42490749, Length=235, Percent_Identity=27.6595744680851, Blast_Score=86, Evalue=5e-17, Organism=Homo sapiens, GI9665248, Length=224, Percent_Identity=29.0178571428571, Blast_Score=85, Evalue=1e-16, Organism=Homo sapiens, GI46592956, Length=139, Percent_Identity=35.2517985611511, Blast_Score=84, Evalue=2e-16, Organism=Homo sapiens, GI46592898, Length=140, Percent_Identity=35, Blast_Score=84, Evalue=2e-16, Organism=Homo sapiens, GI46592978, Length=140, Percent_Identity=35, Blast_Score=84, Evalue=2e-16, Organism=Homo sapiens, GI46592964, Length=140, Percent_Identity=35, Blast_Score=84, Evalue=2e-16, Organism=Homo sapiens, GI46592971, Length=139, Percent_Identity=35.2517985611511, Blast_Score=84, Evalue=2e-16, Organism=Homo sapiens, GI46592915, Length=140, Percent_Identity=35, Blast_Score=84, Evalue=2e-16, Organism=Homo sapiens, GI6005701, Length=254, Percent_Identity=24.8031496062992, Blast_Score=83, Evalue=4e-16, Organism=Homo sapiens, GI73747915, Length=213, Percent_Identity=31.924882629108, Blast_Score=83, Evalue=4e-16, Organism=Homo sapiens, GI9955968, Length=241, Percent_Identity=29.045643153527, Blast_Score=82, Evalue=1e-15, Organism=Homo sapiens, GI9955966, Length=241, Percent_Identity=29.045643153527, Blast_Score=81, Evalue=1e-15, Organism=Homo sapiens, GI45243524, Length=241, Percent_Identity=29.045643153527, Blast_Score=81, Evalue=1e-15, Organism=Homo sapiens, GI11967969, Length=217, Percent_Identity=26.2672811059908, Blast_Score=81, Evalue=2e-15, Organism=Homo sapiens, GI215820660, Length=186, Percent_Identity=29.0322580645161, Blast_Score=78, Evalue=1e-14, Organism=Homo sapiens, GI20143975, Length=186, Percent_Identity=29.0322580645161, Blast_Score=78, Evalue=1e-14, Organism=Homo sapiens, GI73747917, Length=156, Percent_Identity=33.974358974359, Blast_Score=73, Evalue=5e-13, Organism=Homo sapiens, GI62526033, Length=222, Percent_Identity=25.2252252252252, Blast_Score=72, Evalue=8e-13, Organism=Homo sapiens, GI89111135, Length=200, Percent_Identity=30.5, Blast_Score=68, Evalue=1e-11, Organism=Homo sapiens, GI25914749, Length=225, Percent_Identity=27.5555555555556, Blast_Score=65, Evalue=7e-11, Organism=Homo sapiens, GI11967971, Length=160, Percent_Identity=28.75, Blast_Score=65, Evalue=7e-11, Organism=Escherichia coli, GI1787712, Length=338, Percent_Identity=55.3254437869823, Blast_Score=363, Evalue=1e-101, Organism=Escherichia coli, GI1787370, Length=357, Percent_Identity=48.1792717086835, Blast_Score=312, Evalue=2e-86, Organism=Escherichia coli, GI87081791, Length=358, Percent_Identity=42.1787709497207, Blast_Score=285, Evalue=3e-78, Organism=Escherichia coli, GI87081709, Length=311, Percent_Identity=44.0514469453376, Blast_Score=254, Evalue=6e-69, Organism=Escherichia coli, GI87082267, Length=238, Percent_Identity=45.7983193277311, Blast_Score=227, Evalue=9e-61, Organism=Escherichia coli, GI1790467, Length=237, Percent_Identity=43.4599156118143, Blast_Score=221, Evalue=4e-59, Organism=Escherichia coli, GI1788761, Length=248, Percent_Identity=45.5645161290323, Blast_Score=216, Evalue=1e-57, Organism=Escherichia coli, GI1789032, Length=275, Percent_Identity=36.7272727272727, Blast_Score=172, Evalue=2e-44, Organism=Escherichia coli, GI1788450, Length=239, Percent_Identity=41.0041841004184, Blast_Score=172, Evalue=3e-44, Organism=Escherichia coli, GI1787089, Length=219, Percent_Identity=39.2694063926941, Blast_Score=150, Evalue=8e-38, Organism=Escherichia coli, GI1787164, Length=212, Percent_Identity=43.3962264150943, Blast_Score=150, Evalue=8e-38, Organism=Escherichia coli, GI1787029, Length=236, Percent_Identity=37.7118644067797, Blast_Score=150, Evalue=9e-38, Organism=Escherichia coli, GI1786563, Length=264, Percent_Identity=37.5, Blast_Score=150, Evalue=1e-37, Organism=Escherichia coli, GI1789672, Length=237, Percent_Identity=34.1772151898734, Blast_Score=148, Evalue=6e-37, Organism=Escherichia coli, GI1786253, Length=207, Percent_Identity=40.0966183574879, Blast_Score=142, Evalue=3e-35, Organism=Escherichia coli, GI1788225, Length=235, Percent_Identity=37.8723404255319, Blast_Score=139, Evalue=3e-34, Organism=Escherichia coli, GI1786398, Length=253, Percent_Identity=28.8537549407115, Blast_Score=130, Evalue=1e-31, Organism=Escherichia coli, GI1789873, Length=207, Percent_Identity=37.6811594202899, Blast_Score=126, Evalue=2e-30, Organism=Escherichia coli, GI1790544, Length=232, Percent_Identity=35.7758620689655, Blast_Score=125, Evalue=5e-30, Organism=Escherichia coli, GI1787758, Length=226, Percent_Identity=34.9557522123894, Blast_Score=124, Evalue=1e-29, Organism=Escherichia coli, GI1786872, Length=229, Percent_Identity=34.061135371179, Blast_Score=122, Evalue=3e-29, Organism=Escherichia coli, GI1790162, Length=242, Percent_Identity=34.7107438016529, Blast_Score=122, Evalue=3e-29, Organism=Escherichia coli, GI1789962, Length=255, Percent_Identity=30.9803921568627, Blast_Score=121, Evalue=5e-29, Organism=Escherichia coli, GI1789891, Length=229, Percent_Identity=34.061135371179, Blast_Score=120, Evalue=9e-29, Organism=Escherichia coli, GI87081834, Length=200, Percent_Identity=34, Blast_Score=120, Evalue=2e-28, Organism=Escherichia coli, GI145693107, Length=230, Percent_Identity=33.0434782608696, Blast_Score=119, Evalue=4e-28, Organism=Escherichia coli, GI1787500, Length=243, Percent_Identity=30.0411522633745, Blast_Score=118, Evalue=5e-28, Organism=Escherichia coli, GI1787105, Length=207, Percent_Identity=35.7487922705314, Blast_Score=115, Evalue=3e-27, Organism=Escherichia coli, GI1787547, Length=262, Percent_Identity=30.9160305343511, Blast_Score=115, Evalue=4e-27, Organism=Escherichia coli, GI48994943, Length=232, Percent_Identity=32.7586206896552, Blast_Score=114, Evalue=1e-26, Organism=Escherichia coli, GI87081782, Length=227, Percent_Identity=29.5154185022026, Blast_Score=113, Evalue=2e-26, Organism=Escherichia coli, GI1786319, Length=218, Percent_Identity=32.5688073394495, Blast_Score=112, Evalue=3e-26, Organism=Escherichia coli, GI1786703, Length=223, Percent_Identity=34.0807174887892, Blast_Score=110, Evalue=1e-25, Organism=Escherichia coli, GI1789864, Length=240, Percent_Identity=30.4166666666667, Blast_Score=110, Evalue=2e-25, Organism=Escherichia coli, GI1788506, Length=234, Percent_Identity=29.9145299145299, Blast_Score=107, Evalue=8e-25, Organism=Escherichia coli, GI48995001, Length=220, Percent_Identity=30.9090909090909, Blast_Score=105, Evalue=5e-24, Organism=Escherichia coli, GI1788053, Length=196, Percent_Identity=33.1632653061224, Blast_Score=103, Evalue=1e-23, Organism=Escherichia coli, GI1788644, Length=257, Percent_Identity=32.6848249027237, Blast_Score=103, Evalue=1e-23, Organism=Escherichia coli, GI1786981, Length=196, Percent_Identity=35.7142857142857, Blast_Score=103, Evalue=2e-23, Organism=Escherichia coli, GI48994883, Length=265, Percent_Identity=27.5471698113208, Blast_Score=101, Evalue=6e-23, Organism=Escherichia coli, GI1786803, Length=220, Percent_Identity=29.0909090909091, Blast_Score=100, Evalue=2e-22, Organism=Escherichia coli, GI1789593, Length=232, Percent_Identity=30.1724137931034, Blast_Score=100, Evalue=3e-22, Organism=Escherichia coli, GI1789586, Length=232, Percent_Identity=30.6034482758621, Blast_Score=96, Evalue=3e-21, Organism=Escherichia coli, GI1788165, Length=213, Percent_Identity=29.1079812206573, Blast_Score=96, Evalue=4e-21, Organism=Escherichia coli, GI1786698, Length=199, Percent_Identity=30.6532663316583, Blast_Score=96, Evalue=4e-21, Organism=Escherichia coli, GI1790739, Length=220, Percent_Identity=29.5454545454545, Blast_Score=96, Evalue=4e-21, Organism=Escherichia coli, GI1788210, Length=214, Percent_Identity=27.1028037383178, Blast_Score=94, Evalue=2e-20, Organism=Escherichia coli, GI1790525, Length=262, Percent_Identity=25.5725190839695, Blast_Score=92, Evalue=5e-20, Organism=Escherichia coli, GI1789963, Length=251, Percent_Identity=28.2868525896414, Blast_Score=91, Evalue=8e-20, Organism=Escherichia coli, GI1789991, Length=222, Percent_Identity=27.4774774774775, Blast_Score=90, Evalue=2e-19, Organism=Escherichia coli, GI1790190, Length=226, Percent_Identity=27.8761061946903, Blast_Score=88, Evalue=7e-19, Organism=Escherichia coli, GI1787792, Length=212, Percent_Identity=26.4150943396226, Blast_Score=88, Evalue=7e-19, Organism=Escherichia coli, GI1787759, Length=247, Percent_Identity=28.7449392712551, Blast_Score=86, Evalue=3e-18, Organism=Escherichia coli, GI1786345, Length=230, Percent_Identity=27.8260869565217, Blast_Score=84, Evalue=1e-17, Organism=Escherichia coli, GI2367384, Length=226, Percent_Identity=30.9734513274336, Blast_Score=84, Evalue=1e-17, Organism=Escherichia coli, GI87082268, Length=213, Percent_Identity=27.6995305164319, Blast_Score=82, Evalue=6e-17, Organism=Escherichia coli, GI48994997, Length=223, Percent_Identity=27.8026905829596, Blast_Score=81, Evalue=8e-17, Organism=Escherichia coli, GI1788897, Length=239, Percent_Identity=27.1966527196653, Blast_Score=80, Evalue=2e-16, Organism=Escherichia coli, GI1787143, Length=219, Percent_Identity=31.0502283105023, Blast_Score=77, Evalue=2e-15, Organism=Escherichia coli, GI1788472, Length=214, Percent_Identity=21.9626168224299, Blast_Score=74, Evalue=1e-14, Organism=Escherichia coli, GI1788540, Length=215, Percent_Identity=27.906976744186, Blast_Score=74, Evalue=1e-14, Organism=Escherichia coli, GI1787041, Length=225, Percent_Identity=25.7777777777778, Blast_Score=73, Evalue=3e-14, Organism=Escherichia coli, GI1787548, Length=256, Percent_Identity=23.4375, Blast_Score=73, Evalue=3e-14, Organism=Escherichia coli, GI1787112, Length=218, Percent_Identity=27.9816513761468, Blast_Score=66, Evalue=4e-12, Organism=Escherichia coli, GI1786653, Length=215, Percent_Identity=29.3023255813954, Blast_Score=64, Evalue=2e-11, Organism=Escherichia coli, GI1786654, Length=217, Percent_Identity=27.1889400921659, Blast_Score=63, Evalue=3e-11, Organism=Caenorhabditis elegans, GI17510237, Length=236, Percent_Identity=26.271186440678, Blast_Score=108, Evalue=4e-24, Organism=Caenorhabditis elegans, GI115533608, Length=213, Percent_Identity=29.5774647887324, Blast_Score=104, Evalue=5e-23, Organism=Caenorhabditis elegans, GI17565586, Length=221, Percent_Identity=30.7692307692308, Blast_Score=103, Evalue=1e-22, Organism=Caenorhabditis elegans, GI71983516, Length=221, Percent_Identity=29.8642533936652, Blast_Score=99, Evalue=3e-21, Organism=Caenorhabditis elegans, GI71983510, Length=221, Percent_Identity=29.8642533936652, Blast_Score=99, Evalue=3e-21, Organism=Caenorhabditis elegans, GI71983523, Length=221, Percent_Identity=29.8642533936652, Blast_Score=99, Evalue=3e-21, Organism=Caenorhabditis elegans, GI71992290, Length=209, Percent_Identity=32.5358851674641, Blast_Score=98, Evalue=5e-21, Organism=Caenorhabditis elegans, GI17511077, Length=219, Percent_Identity=31.0502283105023, Blast_Score=96, Evalue=2e-20, Organism=Caenorhabditis elegans, GI193209708, Length=207, Percent_Identity=31.8840579710145, Blast_Score=96, Evalue=3e-20, Organism=Caenorhabditis elegans, GI25146777, Length=215, Percent_Identity=30.2325581395349, Blast_Score=96, Evalue=4e-20, Organism=Caenorhabditis elegans, GI193202349, Length=218, Percent_Identity=31.1926605504587, Blast_Score=95, Evalue=5e-20, Organism=Caenorhabditis elegans, GI193208177, Length=219, Percent_Identity=29.6803652968037, Blast_Score=95, Evalue=5e-20, Organism=Caenorhabditis elegans, GI17558664, Length=230, Percent_Identity=27.8260869565217, Blast_Score=94, Evalue=1e-19, Organism=Caenorhabditis elegans, GI115534520, Length=225, Percent_Identity=28, Blast_Score=94, Evalue=1e-19, Organism=Caenorhabditis elegans, GI17565938, Length=216, Percent_Identity=31.0185185185185, Blast_Score=92, Evalue=5e-19, Organism=Caenorhabditis elegans, GI17533971, Length=218, Percent_Identity=33.9449541284404, Blast_Score=92, Evalue=5e-19, Organism=Caenorhabditis elegans, GI17541710, Length=225, Percent_Identity=31.5555555555556, Blast_Score=91, Evalue=8e-19, Organism=Caenorhabditis elegans, GI71996809, Length=214, Percent_Identity=28.9719626168224, Blast_Score=90, Evalue=2e-18, Organism=Caenorhabditis elegans, GI193211015, Length=214, Percent_Identity=28.9719626168224, Blast_Score=90, Evalue=2e-18, Organism=Caenorhabditis elegans, GI193211017, Length=214, Percent_Identity=28.9719626168224, Blast_Score=90, Evalue=2e-18, Organism=Caenorhabditis elegans, GI17543740, Length=220, Percent_Identity=29.0909090909091, Blast_Score=87, Evalue=1e-17, Organism=Caenorhabditis elegans, GI17567265, Length=208, Percent_Identity=30.7692307692308, Blast_Score=86, Evalue=2e-17, Organism=Caenorhabditis elegans, GI115535101, Length=208, Percent_Identity=31.25, Blast_Score=86, Evalue=3e-17, Organism=Caenorhabditis elegans, GI17567269, Length=208, Percent_Identity=30.2884615384615, Blast_Score=85, Evalue=5e-17, Organism=Caenorhabditis elegans, GI17569145, Length=209, Percent_Identity=32.5358851674641, Blast_Score=84, Evalue=8e-17, Organism=Caenorhabditis elegans, GI212646699, Length=214, Percent_Identity=28.0373831775701, Blast_Score=84, Evalue=1e-16, Organism=Caenorhabditis elegans, GI71992285, Length=232, Percent_Identity=31.0344827586207, Blast_Score=82, Evalue=3e-16, Organism=Caenorhabditis elegans, GI71984940, Length=218, Percent_Identity=29.8165137614679, Blast_Score=80, Evalue=1e-15, Organism=Caenorhabditis elegans, GI115533592, Length=182, Percent_Identity=31.8681318681319, Blast_Score=79, Evalue=3e-15, Organism=Caenorhabditis elegans, GI17569143, Length=216, Percent_Identity=28.2407407407407, Blast_Score=78, Evalue=9e-15, Organism=Caenorhabditis elegans, GI17569081, Length=212, Percent_Identity=26.8867924528302, Blast_Score=66, Evalue=3e-11, Organism=Caenorhabditis elegans, GI17555800, Length=207, Percent_Identity=28.9855072463768, Blast_Score=65, Evalue=4e-11, Organism=Caenorhabditis elegans, GI71996550, Length=209, Percent_Identity=27.2727272727273, Blast_Score=65, Evalue=6e-11, Organism=Saccharomyces cerevisiae, GI6324985, Length=225, Percent_Identity=28, Blast_Score=98, Evalue=2e-21, Organism=Saccharomyces cerevisiae, GI6323217, Length=224, Percent_Identity=32.1428571428571, Blast_Score=81, Evalue=2e-16, Organism=Saccharomyces cerevisiae, GI6323959, Length=230, Percent_Identity=25.6521739130435, Blast_Score=77, Evalue=3e-15, Organism=Saccharomyces cerevisiae, GI6322640, Length=228, Percent_Identity=25.4385964912281, Blast_Score=73, Evalue=8e-14, Organism=Saccharomyces cerevisiae, GI6324498, Length=224, Percent_Identity=24.5535714285714, Blast_Score=70, Evalue=5e-13, Organism=Drosophila melanogaster, GI24666092, Length=219, Percent_Identity=29.2237442922374, Blast_Score=115, Evalue=3e-26, Organism=Drosophila melanogaster, GI221500365, Length=213, Percent_Identity=31.924882629108, Blast_Score=111, Evalue=8e-25, Organism=Drosophila melanogaster, GI116007184, Length=213, Percent_Identity=31.924882629108, Blast_Score=111, Evalue=8e-25, Organism=Drosophila melanogaster, GI24648314, Length=212, Percent_Identity=31.1320754716981, Blast_Score=104, Evalue=1e-22, Organism=Drosophila melanogaster, GI24643674, Length=241, Percent_Identity=27.8008298755187, Blast_Score=104, Evalue=1e-22, Organism=Drosophila melanogaster, GI221512771, Length=262, Percent_Identity=25.9541984732824, Blast_Score=100, Evalue=2e-21, Organism=Drosophila melanogaster, GI28573571, Length=210, Percent_Identity=29.0476190476191, Blast_Score=95, Evalue=6e-20, Organism=Drosophila melanogaster, GI281363262, Length=217, Percent_Identity=32.7188940092166, Blast_Score=94, Evalue=1e-19, Organism=Drosophila melanogaster, GI85726357, Length=216, Percent_Identity=31.4814814814815, Blast_Score=94, Evalue=1e-19, Organism=Drosophila melanogaster, GI24653245, Length=217, Percent_Identity=32.7188940092166, Blast_Score=94, Evalue=2e-19, Organism=Drosophila melanogaster, GI28574150, Length=232, Percent_Identity=26.2931034482759, Blast_Score=93, Evalue=3e-19, Organism=Drosophila melanogaster, GI116007328, Length=232, Percent_Identity=26.2931034482759, Blast_Score=93, Evalue=3e-19, Organism=Drosophila melanogaster, GI28573573, Length=205, Percent_Identity=29.2682926829268, Blast_Score=92, Evalue=4e-19, Organism=Drosophila melanogaster, GI24659289, Length=209, Percent_Identity=32.0574162679426, Blast_Score=92, Evalue=5e-19, Organism=Drosophila melanogaster, GI23397593, Length=213, Percent_Identity=32.8638497652582, Blast_Score=91, Evalue=1e-18, Organism=Drosophila melanogaster, GI24641565, Length=217, Percent_Identity=32.258064516129, Blast_Score=91, Evalue=1e-18, Organism=Drosophila melanogaster, GI17136662, Length=217, Percent_Identity=30.4147465437788, Blast_Score=90, Evalue=2e-18, Organism=Drosophila melanogaster, GI24650855, Length=201, Percent_Identity=31.3432835820896, Blast_Score=87, Evalue=2e-17, Organism=Drosophila melanogaster, GI24650853, Length=201, Percent_Identity=31.3432835820896, Blast_Score=87, Evalue=2e-17, Organism=Drosophila melanogaster, GI281362751, Length=201, Percent_Identity=31.3432835820896, Blast_Score=86, Evalue=3e-17, Organism=Drosophila melanogaster, GI221500419, Length=216, Percent_Identity=28.7037037037037, Blast_Score=85, Evalue=8e-17, Organism=Drosophila melanogaster, GI28574744, Length=193, Percent_Identity=32.6424870466321, Blast_Score=84, Evalue=1e-16, Organism=Drosophila melanogaster, GI24582014, Length=203, Percent_Identity=31.0344827586207, Blast_Score=84, Evalue=2e-16, Organism=Drosophila melanogaster, GI24582012, Length=203, Percent_Identity=31.0344827586207, Blast_Score=84, Evalue=2e-16, Organism=Drosophila melanogaster, GI85725262, Length=202, Percent_Identity=28.7128712871287, Blast_Score=82, Evalue=7e-16, Organism=Drosophila melanogaster, GI28574533, Length=221, Percent_Identity=28.0542986425339, Blast_Score=81, Evalue=8e-16, Organism=Drosophila melanogaster, GI28571209, Length=216, Percent_Identity=25.9259259259259, Blast_Score=81, Evalue=1e-15, Organism=Drosophila melanogaster, GI21357907, Length=206, Percent_Identity=29.126213592233, Blast_Score=79, Evalue=4e-15, Organism=Drosophila melanogaster, GI45552199, Length=235, Percent_Identity=26.3829787234043, Blast_Score=75, Evalue=6e-14, Organism=Drosophila melanogaster, GI161076684, Length=173, Percent_Identity=30.635838150289, Blast_Score=75, Evalue=7e-14, Organism=Drosophila melanogaster, GI24581617, Length=173, Percent_Identity=30.635838150289, Blast_Score=75, Evalue=7e-14, Organism=Drosophila melanogaster, GI24581615, Length=173, Percent_Identity=30.635838150289, Blast_Score=75, Evalue=7e-14, Organism=Drosophila melanogaster, GI24581407, Length=235, Percent_Identity=26.3829787234043, Blast_Score=75, Evalue=8e-14, Organism=Drosophila melanogaster, GI161076682, Length=173, Percent_Identity=30.635838150289, Blast_Score=75, Evalue=9e-14, Organism=Drosophila melanogaster, GI85724864, Length=242, Percent_Identity=27.6859504132231, Blast_Score=74, Evalue=2e-13, Organism=Drosophila melanogaster, GI24580555, Length=242, Percent_Identity=27.6859504132231, Blast_Score=74, Evalue=2e-13, Organism=Drosophila melanogaster, GI85816269, Length=242, Percent_Identity=27.6859504132231, Blast_Score=74, Evalue=2e-13, Organism=Drosophila melanogaster, GI24580553, Length=242, Percent_Identity=27.6859504132231, Blast_Score=74, Evalue=2e-13, Organism=Drosophila melanogaster, GI85724858, Length=195, Percent_Identity=27.1794871794872, Blast_Score=73, Evalue=3e-13, Organism=Drosophila melanogaster, GI85724856, Length=195, Percent_Identity=27.1794871794872, Blast_Score=73, Evalue=3e-13, Organism=Drosophila melanogaster, GI24580547, Length=195, Percent_Identity=27.1794871794872, Blast_Score=73, Evalue=3e-13, Organism=Drosophila melanogaster, GI24580551, Length=195, Percent_Identity=27.1794871794872, Blast_Score=73, Evalue=3e-13, Organism=Drosophila melanogaster, GI24580549, Length=195, Percent_Identity=27.1794871794872, Blast_Score=73, Evalue=3e-13, Organism=Drosophila melanogaster, GI24580545, Length=195, Percent_Identity=27.1794871794872, Blast_Score=73, Evalue=3e-13, Organism=Drosophila melanogaster, GI28574259, Length=227, Percent_Identity=26.431718061674, Blast_Score=73, Evalue=3e-13, Organism=Drosophila melanogaster, GI24581409, Length=204, Percent_Identity=28.921568627451, Blast_Score=71, Evalue=1e-12, Organism=Drosophila melanogaster, GI17647959, Length=217, Percent_Identity=28.5714285714286, Blast_Score=70, Evalue=2e-12, Organism=Drosophila melanogaster, GI24649703, Length=214, Percent_Identity=28.5046728971963, Blast_Score=69, Evalue=3e-12, Organism=Drosophila melanogaster, GI19920532, Length=195, Percent_Identity=31.2820512820513, Blast_Score=69, Evalue=3e-12, Organism=Drosophila melanogaster, GI24580930, Length=195, Percent_Identity=31.2820512820513, Blast_Score=69, Evalue=3e-12, Organism=Drosophila melanogaster, GI281361582, Length=212, Percent_Identity=29.7169811320755, Blast_Score=69, Evalue=4e-12, Organism=Drosophila melanogaster, GI45550390, Length=223, Percent_Identity=26.457399103139, Blast_Score=69, Evalue=6e-12, Organism=Drosophila melanogaster, GI45552805, Length=157, Percent_Identity=30.5732484076433, Blast_Score=69, Evalue=7e-12, Organism=Drosophila melanogaster, GI17136592, Length=207, Percent_Identity=28.0193236714976, Blast_Score=68, Evalue=1e-11, Organism=Drosophila melanogaster, GI17647219, Length=157, Percent_Identity=30.5732484076433, Blast_Score=68, Evalue=1e-11, Organism=Drosophila melanogaster, GI45552437, Length=211, Percent_Identity=27.4881516587678, Blast_Score=67, Evalue=2e-11, Organism=Drosophila melanogaster, GI24585557, Length=211, Percent_Identity=27.4881516587678, Blast_Score=67, Evalue=3e-11, Organism=Drosophila melanogaster, GI45551502, Length=209, Percent_Identity=29.6650717703349, Blast_Score=65, Evalue=6e-11, Organism=Drosophila melanogaster, GI45551501, Length=209, Percent_Identity=29.6650717703349, Blast_Score=65, Evalue=7e-11, Organism=Drosophila melanogaster, GI21357851, Length=209, Percent_Identity=29.6650717703349, Blast_Score=65, Evalue=9e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003439 - InterPro: IPR017871 - InterPro: IPR003593 - InterPro: IPR008995 - InterPro: IPR013611 [H]
Pfam domain/function: PF00005 ABC_tran; PF08402 TOBE_2 [H]
EC number: NA
Molecular weight: Translated: 38614; Mature: 38483
Theoretical pI: Translated: 4.98; Mature: 4.98
Prosite motif: PS00211 ABC_TRANSPORTER_1 ; PS50893 ABC_TRANSPORTER_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 2.0 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 1.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MATAISVRGLSKYFGDVRAVDDLDLDIADGEFFSMLGPSGSGKTTVLRLIAGFEEPSAGV CCCEEEHHHHHHHHCCCEECCCCCEEECCCCCHHHCCCCCCCHHHHHHHHHCCCCCCCCE IMLGGEDVTRRPPFARDVNTVFQDYAIFPHLSVRQNVEYGLRVKKVPGAERRRRAEQALA EEECCCCCCCCCCCHHHHHHHHHHHHHCCCCHHHCCCCCCEEEEECCCHHHHHHHHHHHH TMRLEGYAERRPHQLSGGQRQRVALARALVNRPQVLLLDEPLGALDLKLRREMQIELKEI HHHHHHHHHCCCCCCCCCHHHHHHHHHHHHCCCCEEEEECCCCHHHHHHHHHHHHHHHHH QREVGITFVFVTHDQEEALTMSDRIAVFNEGRIEQLASPVELYERPASAFVAGFVGTSNL HHHHCEEEEEEECCCHHHHHHHCEEEEECCCCHHHHCCHHHHHHCCHHHHHHHHCCCCHH LQGDVARDLVGEPGPFVIRPEKLQLVAEPAREPGLVTAPGVVREVVYLGASTMSVVELEA HHHHHHHHHCCCCCCEEECCHHHHEEECCCCCCCCEECCHHHHHHHHHCCCCEEEEEECC GPTVTVSHPNTDTSIDAALERRDQRVVVTWRRDHLVSLGSPDPAASPEEETA CCEEEEECCCCCCHHHHHHHCCCCEEEEEEECCCEEECCCCCCCCCCCCCCC >Mature Secondary Structure ATAISVRGLSKYFGDVRAVDDLDLDIADGEFFSMLGPSGSGKTTVLRLIAGFEEPSAGV CCEEEHHHHHHHHCCCEECCCCCEEECCCCCHHHCCCCCCCHHHHHHHHHCCCCCCCCE IMLGGEDVTRRPPFARDVNTVFQDYAIFPHLSVRQNVEYGLRVKKVPGAERRRRAEQALA EEECCCCCCCCCCCHHHHHHHHHHHHHCCCCHHHCCCCCCEEEEECCCHHHHHHHHHHHH TMRLEGYAERRPHQLSGGQRQRVALARALVNRPQVLLLDEPLGALDLKLRREMQIELKEI HHHHHHHHHCCCCCCCCCHHHHHHHHHHHHCCCCEEEEECCCCHHHHHHHHHHHHHHHHH QREVGITFVFVTHDQEEALTMSDRIAVFNEGRIEQLASPVELYERPASAFVAGFVGTSNL HHHHCEEEEEEECCCHHHHHHHCEEEEECCCCHHHHCCHHHHHHCCHHHHHHHHCCCCHH LQGDVARDLVGEPGPFVIRPEKLQLVAEPAREPGLVTAPGVVREVVYLGASTMSVVELEA HHHHHHHHHCCCCCCEEECCHHHHEEECCCCCCCCEECCHHHHHHHHHCCCCEEEEEECC GPTVTVSHPNTDTSIDAALERRDQRVVVTWRRDHLVSLGSPDPAASPEEETA CCEEEEECCCCCCHHHHHHHCCCCEEEEEEECCCEEECCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9097039; 9278503 [H]