Definition Nocardioides sp. JS614 chromosome, complete genome.
Accession NC_008699
Length 4,985,871

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The map label for this gene is 119717415

Identifier: 119717415

GI number: 119717415

Start: 3391439

End: 3391804

Strand: Reverse

Name: 119717415

Synonym: Noca_3191

Alternate gene names: NA

Gene position: 3391804-3391439 (Counterclockwise)

Preceding gene: 119717416

Following gene: 119717414

Centisome position: 68.03

GC content: 71.58

Gene sequence:

>366_bases
GTGGCGCGTGAACACATCCCTTCTGCATGCCCCGAACCCTCCAGCCTGCCAGGCCCGGTCCGGACGTGTGTCGGGTGCCG
GAAGCGGGCCGCGAAGAACGAGCTGGTCCGCGTGACCGTCGGCTCGGATGCGCACGGCCACCCGGCCGTCGTACCCGATC
CGGCAGCCACCGCACCCGGGCGGGGAGCGCACCTGCACCCCACCATGGAGTGTTACGACCTCGCGGTGCGCCGGAAGGCG
TTCGGCCGGGCCCTCCGGGTCACGACCGGGCTCTCCAGTGCACCGGTGGGGGAGTACCTCGGCTCGGCAGACGGCACGGC
ACCACACCCCCGATCGACCGACAGAGACTGGAGCAGCAGCTCATGA

Upstream 100 bases:

>100_bases
GAGGCCGAAGCCGGCAGCGACGCCTGAGGAGCGGCGGGATCGCGGCACCACGGGTCCCCGGTTCGATAAGGGTGGCCCGA
TCGCGGTAGGGTTGTCGCCA

Downstream 100 bases:

>100_bases
GCACTCGATGAGTACTTCGCGATGAGTTTGCACAACCACTAACGGTCTGAATCACCCCCCAGCACAGAACTGGACCCGGG
TCTCAGGCCAGAAGGAGAAG

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 121; Mature: 120

Protein sequence:

>121_residues
MAREHIPSACPEPSSLPGPVRTCVGCRKRAAKNELVRVTVGSDAHGHPAVVPDPAATAPGRGAHLHPTMECYDLAVRRKA
FGRALRVTTGLSSAPVGEYLGSADGTAPHPRSTDRDWSSSS

Sequences:

>Translated_121_residues
MAREHIPSACPEPSSLPGPVRTCVGCRKRAAKNELVRVTVGSDAHGHPAVVPDPAATAPGRGAHLHPTMECYDLAVRRKA
FGRALRVTTGLSSAPVGEYLGSADGTAPHPRSTDRDWSSSS
>Mature_120_residues
AREHIPSACPEPSSLPGPVRTCVGCRKRAAKNELVRVTVGSDAHGHPAVVPDPAATAPGRGAHLHPTMECYDLAVRRKAF
GRALRVTTGLSSAPVGEYLGSADGTAPHPRSTDRDWSSSS

Specific function: Unknown

COG id: COG2740

COG function: function code K; Predicted nucleic-acid-binding protein implicated in transcription termination

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 12662; Mature: 12531

Theoretical pI: Translated: 9.03; Mature: 9.03

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

3.3 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
5.0 %Cys+Met (Translated Protein)
3.3 %Cys     (Mature Protein)
0.8 %Met     (Mature Protein)
4.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAREHIPSACPEPSSLPGPVRTCVGCRKRAAKNELVRVTVGSDAHGHPAVVPDPAATAPG
CCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCEEEEEECCCCCCCCCCCCCCCCCCCC
RGAHLHPTMECYDLAVRRKAFGRALRVTTGLSSAPVGEYLGSADGTAPHPRSTDRDWSSS
CCCCCCCCHHHHHHHHHHHHHHCCHHHCCCCCCCCHHHHHCCCCCCCCCCCCCCCCCCCC
S
C
>Mature Secondary Structure 
AREHIPSACPEPSSLPGPVRTCVGCRKRAAKNELVRVTVGSDAHGHPAVVPDPAATAPG
CCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCEEEEEECCCCCCCCCCCCCCCCCCCC
RGAHLHPTMECYDLAVRRKAFGRALRVTTGLSSAPVGEYLGSADGTAPHPRSTDRDWSSS
CCCCCCCCHHHHHHHHHHHHHHCCHHHCCCCCCCCHHHHHCCCCCCCCCCCCCCCCCCCC
S
C

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA