Definition | Nocardioides sp. JS614 chromosome, complete genome. |
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Accession | NC_008699 |
Length | 4,985,871 |
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The map label for this gene is 119717397
Identifier: 119717397
GI number: 119717397
Start: 3371225
End: 3371923
Strand: Reverse
Name: 119717397
Synonym: Noca_3173
Alternate gene names: NA
Gene position: 3371923-3371225 (Counterclockwise)
Preceding gene: 119717398
Following gene: 119717391
Centisome position: 67.63
GC content: 72.25
Gene sequence:
>699_bases ATGACCGAGTACCTGGACAGCCGCGCGCTGCGCAACATCGACTGCTACGGCCAGCGCTTCATGAGGCCGGGCACCTACCC CTACGCCCTGGTCCCGGCCGGCGGCGCCGGTGCCGGCGGCGACTTCCCGTACGTCGTCGAGGTCGGCGAGCCGTCCTCGA AACGGGAGCGCGACATGCACCAGACGACCGTCACCGTGTCCTTCGTCAAGGAGCGCCACGGCGACTGCTGCGACGAGCGC ACCGTCGACCCGGGCCGGTTCGTGCCCGACCAGGAGCGCGTGACGGTCGAGGCCGGCGACATGGTGGTGTGGAACTCACC CGACGCGGCCGCCCGGCCGTTCGCCGTGGCCGGCCAGAAGGAGTTCTTCGGCAGCAGCGTCCTGACCAACGAGTGCGGCT ACACCCACGTCTTCACGACGCCGGGGGAGCACGAGTACGTCGACGCGAACGGCTCGGGCCTGCGCGGGGTGGTCCGGGTC AAGGACCCCAGGCCGCGCAACGCGGAGGAGCTGCGCGCCTGGCAGTCCCGCCTGGGCGAGGGGACGCTCGTCCTGATCAG CGACGGCCGGCCCGAGCCGGCCGAGGTCGAGGTCGTGCTGGGGCAGACGGTGTTCTTCGCCGTCGTCACGGGTCCGGGGG TGACCATCACCGACGCCGCCCTGGTCGCGGAGCGACCGCACGAGGCGGGAGCGGCTTAG
Upstream 100 bases:
>100_bases TGTTCGTGACGGTCACGAGCCTCGGCGCCGAGGTCCAGAACAACCCGCCCGAGGACGAGCTGGTCGTCCTCGCCGACATC CAGCCCTGAGGAGCACTGTC
Downstream 100 bases:
>100_bases GCGTCGGTCCCCGGGGTCGTCGGCCCGGACGGCACGGCCCGGTCTCACCGTCGGAGCTCGGCCACCTCTGCCAGGCGCTG GAGCTTGTGGGGGTTGCGGA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 232; Mature: 231
Protein sequence:
>232_residues MTEYLDSRALRNIDCYGQRFMRPGTYPYALVPAGGAGAGGDFPYVVEVGEPSSKRERDMHQTTVTVSFVKERHGDCCDER TVDPGRFVPDQERVTVEAGDMVVWNSPDAAARPFAVAGQKEFFGSSVLTNECGYTHVFTTPGEHEYVDANGSGLRGVVRV KDPRPRNAEELRAWQSRLGEGTLVLISDGRPEPAEVEVVLGQTVFFAVVTGPGVTITDAALVAERPHEAGAA
Sequences:
>Translated_232_residues MTEYLDSRALRNIDCYGQRFMRPGTYPYALVPAGGAGAGGDFPYVVEVGEPSSKRERDMHQTTVTVSFVKERHGDCCDER TVDPGRFVPDQERVTVEAGDMVVWNSPDAAARPFAVAGQKEFFGSSVLTNECGYTHVFTTPGEHEYVDANGSGLRGVVRV KDPRPRNAEELRAWQSRLGEGTLVLISDGRPEPAEVEVVLGQTVFFAVVTGPGVTITDAALVAERPHEAGAA >Mature_231_residues TEYLDSRALRNIDCYGQRFMRPGTYPYALVPAGGAGAGGDFPYVVEVGEPSSKRERDMHQTTVTVSFVKERHGDCCDERT VDPGRFVPDQERVTVEAGDMVVWNSPDAAARPFAVAGQKEFFGSSVLTNECGYTHVFTTPGEHEYVDANGSGLRGVVRVK DPRPRNAEELRAWQSRLGEGTLVLISDGRPEPAEVEVVLGQTVFFAVVTGPGVTITDAALVAERPHEAGAA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 25132; Mature: 25001
Theoretical pI: Translated: 4.69; Mature: 4.69
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.7 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 3.4 %Cys+Met (Translated Protein) 1.7 %Cys (Mature Protein) 1.3 %Met (Mature Protein) 3.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTEYLDSRALRNIDCYGQRFMRPGTYPYALVPAGGAGAGGDFPYVVEVGEPSSKRERDMH CCCCHHHHHHCCCCHHHHHHCCCCCCCEEEEECCCCCCCCCCCEEEECCCCCCHHHHHHH QTTVTVSFVKERHGDCCDERTVDPGRFVPDQERVTVEAGDMVVWNSPDAAARPFAVAGQK HHEEEEEEHHHHCCCCCCCCCCCCCCCCCCCCEEEEEECCEEEECCCCCCCCCEEECCCH EFFGSSVLTNECGYTHVFTTPGEHEYVDANGSGLRGVVRVKDPRPRNAEELRAWQSRLGE HHCCCCCEECCCCCEEEEECCCCCEEEECCCCCCEEEEEECCCCCCCHHHHHHHHHHCCC GTLVLISDGRPEPAEVEVVLGQTVFFAVVTGPGVTITDAALVAERPHEAGAA CEEEEEECCCCCCCEEEEEECCEEEEEEEECCCCEEECHHHHHCCCCCCCCC >Mature Secondary Structure TEYLDSRALRNIDCYGQRFMRPGTYPYALVPAGGAGAGGDFPYVVEVGEPSSKRERDMH CCCHHHHHHCCCCHHHHHHCCCCCCCEEEEECCCCCCCCCCCEEEECCCCCCHHHHHHH QTTVTVSFVKERHGDCCDERTVDPGRFVPDQERVTVEAGDMVVWNSPDAAARPFAVAGQK HHEEEEEEHHHHCCCCCCCCCCCCCCCCCCCCEEEEEECCEEEECCCCCCCCCEEECCCH EFFGSSVLTNECGYTHVFTTPGEHEYVDANGSGLRGVVRVKDPRPRNAEELRAWQSRLGE HHCCCCCEECCCCCEEEEECCCCCEEEECCCCCCEEEEEECCCCCCCHHHHHHHHHHCCC GTLVLISDGRPEPAEVEVVLGQTVFFAVVTGPGVTITDAALVAERPHEAGAA CEEEEEECCCCCCCEEEEEECCEEEEEEEECCCCEEECHHHHHCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA