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The map label for this gene is paaD [H]

Identifier: 119717380

GI number: 119717380

Start: 3357172

End: 3357657

Strand: Reverse

Name: paaD [H]

Synonym: Noca_3156

Alternate gene names: 119717380

Gene position: 3357657-3357172 (Counterclockwise)

Preceding gene: 119717381

Following gene: 119717379

Centisome position: 67.34

GC content: 71.81

Gene sequence:

>486_bases
GTGAGGCCCGCGTGGAAGATCGCCGCCGACGTCCCGGATCCCGAGCTGCCGGTGGTGACCATCGCCGACCTCGGGATCCT
GCGCGACGTGACCGAGGACGACCAGGGCCGCGTGCACGTCCAGATCACTCCGACGTACTCCGGGTGCCCGGCGATGGAGA
CCATCCGCGCCGACCTGATCGAGAGCCTGACCGCCGCCGGCTACCTGCACGTGGACGTCGAGTTCGTGCTCGCGCCGGCG
TGGACGACCGACTGGATGACCGCGGAGGCCAAGGAGAAGCTGGCGGCCTACGGCATCGCGCCGCCCGGTGACCGGCCGGC
GTCCGGCCTCCCGGGCCAGCCCCTGAGCCTGCCCCTGAGCGTGCGCTGCCCACAGTGCGGGTCGGTGGACACCCGGGAGT
CGAGCCGCTTCGGGTCGACCGCCTGCAAGTCGCTGTGGGTGTGTCGCAGCTGCCGGGAGCCGTTCGACCACTTCAAGGCC
CTCTGA

Upstream 100 bases:

>100_bases
CGGCGCGCGGCGGCGGCCGGCATGGCCTGCACACCGAGGAGCTCGGCTACCTGCTCGCCGAGATGCAGCACCTGCACCGC
TCGCACCCAGGGGCGACCTG

Downstream 100 bases:

>100_bases
TGGGGCGGATCTGAGTGCCGGCCACCTTCCACTCGCTGCGGGTCGCGGCGATCGACGAGCTCACCGACGACGCGGTCGCG
CTCACCTTCGACGTCCCGAC

Product: phenylacetate-CoA oxygenase subunit PaaJ

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 161; Mature: 161

Protein sequence:

>161_residues
MRPAWKIAADVPDPELPVVTIADLGILRDVTEDDQGRVHVQITPTYSGCPAMETIRADLIESLTAAGYLHVDVEFVLAPA
WTTDWMTAEAKEKLAAYGIAPPGDRPASGLPGQPLSLPLSVRCPQCGSVDTRESSRFGSTACKSLWVCRSCREPFDHFKA
L

Sequences:

>Translated_161_residues
MRPAWKIAADVPDPELPVVTIADLGILRDVTEDDQGRVHVQITPTYSGCPAMETIRADLIESLTAAGYLHVDVEFVLAPA
WTTDWMTAEAKEKLAAYGIAPPGDRPASGLPGQPLSLPLSVRCPQCGSVDTRESSRFGSTACKSLWVCRSCREPFDHFKA
L
>Mature_161_residues
MRPAWKIAADVPDPELPVVTIADLGILRDVTEDDQGRVHVQITPTYSGCPAMETIRADLIESLTAAGYLHVDVEFVLAPA
WTTDWMTAEAKEKLAAYGIAPPGDRPASGLPGQPLSLPLSVRCPQCGSVDTRESSRFGSTACKSLWVCRSCREPFDHFKA
L

Specific function: May be part of a multicomponent oxygenase involved in phenylacetyl-CoA hydroxylation [H]

COG id: COG2151

COG function: function code R; Predicted metal-sulfur cluster biosynthetic enzyme

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI226510939, Length=157, Percent_Identity=50.3184713375796, Blast_Score=159, Evalue=7e-41,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002744
- InterPro:   IPR011883 [H]

Pfam domain/function: PF01883 DUF59 [H]

EC number: NA

Molecular weight: Translated: 17466; Mature: 17466

Theoretical pI: Translated: 4.77; Mature: 4.77

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

3.7 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
5.6 %Cys+Met (Translated Protein)
3.7 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
5.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRPAWKIAADVPDPELPVVTIADLGILRDVTEDDQGRVHVQITPTYSGCPAMETIRADLI
CCCCCEEEECCCCCCCCEEEECCCHHHHHCCCCCCCEEEEEEECCCCCCCHHHHHHHHHH
ESLTAAGYLHVDVEFVLAPAWTTDWMTAEAKEKLAAYGIAPPGDRPASGLPGQPLSLPLS
HHHHHCCEEEEEEEEEEECCCCCCCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCEEE
VRCPQCGSVDTRESSRFGSTACKSLWVCRSCREPFDHFKAL
EECCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MRPAWKIAADVPDPELPVVTIADLGILRDVTEDDQGRVHVQITPTYSGCPAMETIRADLI
CCCCCEEEECCCCCCCCEEEECCCHHHHHCCCCCCCEEEEEEECCCCCCCHHHHHHHHHH
ESLTAAGYLHVDVEFVLAPAWTTDWMTAEAKEKLAAYGIAPPGDRPASGLPGQPLSLPLS
HHHHHCCEEEEEEEEEEECCCCCCCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCEEE
VRCPQCGSVDTRESSRFGSTACKSLWVCRSCREPFDHFKAL
EECCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9748275; 9278503; 10766858 [H]