Definition | Nocardioides sp. JS614 chromosome, complete genome. |
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Accession | NC_008699 |
Length | 4,985,871 |
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The map label for this gene is 119717351
Identifier: 119717351
GI number: 119717351
Start: 3330579
End: 3330845
Strand: Reverse
Name: 119717351
Synonym: Noca_3127
Alternate gene names: NA
Gene position: 3330845-3330579 (Counterclockwise)
Preceding gene: 119717355
Following gene: 119717350
Centisome position: 66.81
GC content: 72.28
Gene sequence:
>267_bases ATGACCCCCGACATCCCCGACGCCGGTCACCGCTGGCGCTGCTCCGGCTGTGGCAACCTCACTCGCTTCGACGTCACCCG CACCCGGCGAACCACCGAGTTCTGGCACTTCGACCTCGCCGGCGACCACGACGTCGAGCAGACCGAGGTCCGCGACGAGG CGGTGGAGTCGGTGACCTGTCGCTGGTGCGGCCGCTCCGACGCGATCGAGGTGGTGTCGCGGCACCCGGTCGAGGAGCCG GCGGGCGCGGACTCCGGGCCGAGCTGA
Upstream 100 bases:
>100_bases TAGATCGGGGCACCGACAATCCCGGGGAGACGCGCGGGGTGCGGGGCATAGGCTGTGCTCCCGAGCGGTACGAGAACCCG TGAGCCAGGAGAGGAGCGCG
Downstream 100 bases:
>100_bases CGGGCCGGCCGTGACCGAGCCCGTGCTGCGCTCGCTCGCCGAGCTGCCGGAGCCTGTCCGCGCTCGCGTCGTCGCGATGA CCGCGGAGGCGCTGCCGGAC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 88; Mature: 87
Protein sequence:
>88_residues MTPDIPDAGHRWRCSGCGNLTRFDVTRTRRTTEFWHFDLAGDHDVEQTEVRDEAVESVTCRWCGRSDAIEVVSRHPVEEP AGADSGPS
Sequences:
>Translated_88_residues MTPDIPDAGHRWRCSGCGNLTRFDVTRTRRTTEFWHFDLAGDHDVEQTEVRDEAVESVTCRWCGRSDAIEVVSRHPVEEP AGADSGPS >Mature_87_residues TPDIPDAGHRWRCSGCGNLTRFDVTRTRRTTEFWHFDLAGDHDVEQTEVRDEAVESVTCRWCGRSDAIEVVSRHPVEEPA GADSGPS
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 9872; Mature: 9741
Theoretical pI: Translated: 4.67; Mature: 4.67
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
4.5 %Cys (Translated Protein) 1.1 %Met (Translated Protein) 5.7 %Cys+Met (Translated Protein) 4.6 %Cys (Mature Protein) 0.0 %Met (Mature Protein) 4.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTPDIPDAGHRWRCSGCGNLTRFDVTRTRRTTEFWHFDLAGDHDVEQTEVRDEAVESVTC CCCCCCCCCCEEEECCCCCCEEEECCCCCCCCCEEEEECCCCCCCCHHHHHHHHHHHHHH RWCGRSDAIEVVSRHPVEEPAGADSGPS CCCCCCCHHHHHHCCCCCCCCCCCCCCC >Mature Secondary Structure TPDIPDAGHRWRCSGCGNLTRFDVTRTRRTTEFWHFDLAGDHDVEQTEVRDEAVESVTC CCCCCCCCCEEEECCCCCCEEEECCCCCCCCCEEEEECCCCCCCCHHHHHHHHHHHHHH RWCGRSDAIEVVSRHPVEEPAGADSGPS CCCCCCCHHHHHHCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA