Definition Nocardioides sp. JS614 chromosome, complete genome.
Accession NC_008699
Length 4,985,871

Click here to switch to the map view.

The map label for this gene is 119717334

Identifier: 119717334

GI number: 119717334

Start: 3312787

End: 3313251

Strand: Reverse

Name: 119717334

Synonym: Noca_3110

Alternate gene names: NA

Gene position: 3313251-3312787 (Counterclockwise)

Preceding gene: 119717335

Following gene: 119717333

Centisome position: 66.45

GC content: 76.34

Gene sequence:

>465_bases
GTGAGCCAGGACGGAGAGGGCCCCTCGGCCGAGGGGCCCGAGGTCGGGAGCGTCGCCGAGGAGGCGGCCAAGCTGCTCGG
TGCGCTCTCGGAGTGGGCGCGCGACCAGGGCACCGGGATCGGCGAGGGCGTCGCCGGGCTCGCCGGTCACGCCGCCCGGG
CGGCGCACGAGGTCGACGACCACCTCGCCACCGGCGCGCCGGAGTGCACCTACTGCCCGATCTGCCGCACCGTGCACGTC
CTGCGCCAGACCACGCCGGAGGTGCGCGCCCAGCTCGCCACCGCCGCGACCGCCCTGCTGCAGGCCGCCGCCGGGCTGCT
CGCGACCGCTGTGCCCGACGACCGCTCCGCCCGTGGGGGCGTCGAGCGGATCGATCTCGATGACGATCCCGGCTCCTGGC
CGGAGGACCCGGACGACCCGGACCAGCCGGACACCCCGGGTGGACCTGAGGATGGAGACAGATGA

Upstream 100 bases:

>100_bases
GAGCACGGGGAGCTGCAGGTGCGGTTCGTCGAGGATGCCGACACCGCCAGCGCCGCCGGCACGGCGGTCGGCGCGGCTGC
GGACGAAGCTGGGAGATGAC

Downstream 100 bases:

>100_bases
GCCTGGCGTGTGGCATCGACGTCGGAGGGACGAAGATCGCCGGAGGAGTGGTCGACGAGTCGGGCACGATCCTCGAGGAG
CTGCGCGTGGAGTCGCCCGC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 154; Mature: 153

Protein sequence:

>154_residues
MSQDGEGPSAEGPEVGSVAEEAAKLLGALSEWARDQGTGIGEGVAGLAGHAARAAHEVDDHLATGAPECTYCPICRTVHV
LRQTTPEVRAQLATAATALLQAAAGLLATAVPDDRSARGGVERIDLDDDPGSWPEDPDDPDQPDTPGGPEDGDR

Sequences:

>Translated_154_residues
MSQDGEGPSAEGPEVGSVAEEAAKLLGALSEWARDQGTGIGEGVAGLAGHAARAAHEVDDHLATGAPECTYCPICRTVHV
LRQTTPEVRAQLATAATALLQAAAGLLATAVPDDRSARGGVERIDLDDDPGSWPEDPDDPDQPDTPGGPEDGDR
>Mature_153_residues
SQDGEGPSAEGPEVGSVAEEAAKLLGALSEWARDQGTGIGEGVAGLAGHAARAAHEVDDHLATGAPECTYCPICRTVHVL
RQTTPEVRAQLATAATALLQAAAGLLATAVPDDRSARGGVERIDLDDDPGSWPEDPDDPDQPDTPGGPEDGDR

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 15727; Mature: 15596

Theoretical pI: Translated: 3.95; Mature: 3.95

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.9 %Cys     (Translated Protein)
0.6 %Met     (Translated Protein)
2.6 %Cys+Met (Translated Protein)
2.0 %Cys     (Mature Protein)
0.0 %Met     (Mature Protein)
2.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSQDGEGPSAEGPEVGSVAEEAAKLLGALSEWARDQGTGIGEGVAGLAGHAARAAHEVDD
CCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHH
HLATGAPECTYCPICRTVHVLRQTTPEVRAQLATAATALLQAAAGLLATAVPDDRSARGG
HHHCCCCCCCCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCC
VERIDLDDDPGSWPEDPDDPDQPDTPGGPEDGDR
CEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
>Mature Secondary Structure 
SQDGEGPSAEGPEVGSVAEEAAKLLGALSEWARDQGTGIGEGVAGLAGHAARAAHEVDD
CCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHH
HLATGAPECTYCPICRTVHVLRQTTPEVRAQLATAATALLQAAAGLLATAVPDDRSARGG
HHHCCCCCCCCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCC
VERIDLDDDPGSWPEDPDDPDQPDTPGGPEDGDR
CEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA