Definition | Nocardioides sp. JS614 chromosome, complete genome. |
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Accession | NC_008699 |
Length | 4,985,871 |
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The map label for this gene is 119717334
Identifier: 119717334
GI number: 119717334
Start: 3312787
End: 3313251
Strand: Reverse
Name: 119717334
Synonym: Noca_3110
Alternate gene names: NA
Gene position: 3313251-3312787 (Counterclockwise)
Preceding gene: 119717335
Following gene: 119717333
Centisome position: 66.45
GC content: 76.34
Gene sequence:
>465_bases GTGAGCCAGGACGGAGAGGGCCCCTCGGCCGAGGGGCCCGAGGTCGGGAGCGTCGCCGAGGAGGCGGCCAAGCTGCTCGG TGCGCTCTCGGAGTGGGCGCGCGACCAGGGCACCGGGATCGGCGAGGGCGTCGCCGGGCTCGCCGGTCACGCCGCCCGGG CGGCGCACGAGGTCGACGACCACCTCGCCACCGGCGCGCCGGAGTGCACCTACTGCCCGATCTGCCGCACCGTGCACGTC CTGCGCCAGACCACGCCGGAGGTGCGCGCCCAGCTCGCCACCGCCGCGACCGCCCTGCTGCAGGCCGCCGCCGGGCTGCT CGCGACCGCTGTGCCCGACGACCGCTCCGCCCGTGGGGGCGTCGAGCGGATCGATCTCGATGACGATCCCGGCTCCTGGC CGGAGGACCCGGACGACCCGGACCAGCCGGACACCCCGGGTGGACCTGAGGATGGAGACAGATGA
Upstream 100 bases:
>100_bases GAGCACGGGGAGCTGCAGGTGCGGTTCGTCGAGGATGCCGACACCGCCAGCGCCGCCGGCACGGCGGTCGGCGCGGCTGC GGACGAAGCTGGGAGATGAC
Downstream 100 bases:
>100_bases GCCTGGCGTGTGGCATCGACGTCGGAGGGACGAAGATCGCCGGAGGAGTGGTCGACGAGTCGGGCACGATCCTCGAGGAG CTGCGCGTGGAGTCGCCCGC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 154; Mature: 153
Protein sequence:
>154_residues MSQDGEGPSAEGPEVGSVAEEAAKLLGALSEWARDQGTGIGEGVAGLAGHAARAAHEVDDHLATGAPECTYCPICRTVHV LRQTTPEVRAQLATAATALLQAAAGLLATAVPDDRSARGGVERIDLDDDPGSWPEDPDDPDQPDTPGGPEDGDR
Sequences:
>Translated_154_residues MSQDGEGPSAEGPEVGSVAEEAAKLLGALSEWARDQGTGIGEGVAGLAGHAARAAHEVDDHLATGAPECTYCPICRTVHV LRQTTPEVRAQLATAATALLQAAAGLLATAVPDDRSARGGVERIDLDDDPGSWPEDPDDPDQPDTPGGPEDGDR >Mature_153_residues SQDGEGPSAEGPEVGSVAEEAAKLLGALSEWARDQGTGIGEGVAGLAGHAARAAHEVDDHLATGAPECTYCPICRTVHVL RQTTPEVRAQLATAATALLQAAAGLLATAVPDDRSARGGVERIDLDDDPGSWPEDPDDPDQPDTPGGPEDGDR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 15727; Mature: 15596
Theoretical pI: Translated: 3.95; Mature: 3.95
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.9 %Cys (Translated Protein) 0.6 %Met (Translated Protein) 2.6 %Cys+Met (Translated Protein) 2.0 %Cys (Mature Protein) 0.0 %Met (Mature Protein) 2.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSQDGEGPSAEGPEVGSVAEEAAKLLGALSEWARDQGTGIGEGVAGLAGHAARAAHEVDD CCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHH HLATGAPECTYCPICRTVHVLRQTTPEVRAQLATAATALLQAAAGLLATAVPDDRSARGG HHHCCCCCCCCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCC VERIDLDDDPGSWPEDPDDPDQPDTPGGPEDGDR CEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC >Mature Secondary Structure SQDGEGPSAEGPEVGSVAEEAAKLLGALSEWARDQGTGIGEGVAGLAGHAARAAHEVDD CCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHH HLATGAPECTYCPICRTVHVLRQTTPEVRAQLATAATALLQAAAGLLATAVPDDRSARGG HHHCCCCCCCCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCC VERIDLDDDPGSWPEDPDDPDQPDTPGGPEDGDR CEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA