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The map label for this gene is yfiH [C]

Identifier: 119717283

GI number: 119717283

Start: 3256107

End: 3256802

Strand: Reverse

Name: yfiH [C]

Synonym: Noca_3059

Alternate gene names: 119717283

Gene position: 3256802-3256107 (Counterclockwise)

Preceding gene: 119717284

Following gene: 119717282

Centisome position: 65.32

GC content: 78.16

Gene sequence:

>696_bases
GTGACCTTCCTCTACCGCGACACCGTGTCCTGGGGGCCGGTGGGGACGGTGTCGGTCGGGTTCACCGAGCGGCGCCTCGA
CCTCGGCGACCGCGCGGCGCCTGCCGTGCGCGAGGCCGGGCTCGCCGAGGTGGCCGCCGCGACCGGGGCGACGCCGTACC
TCATGCACCAGGTGCACGGTGCCGAGGTGCTGCTGGTCGAGGACTGGCGCTCGCCGACCTGGGACCCGCAGGTCGACGCG
CTGCTCACGGCCGAGCCGGGGCGGGCGCTGCTGACCCGGGCCGCCGACTGCGTGCCGGTGCTGCTGGCGGCCGACACCGG
TCTGATCGGTGCCGTGCACGCGGGACGGGAGGGCGTACGCCGCGGGGTCGTCACGGCCGCGCTGGAGCGGCTCCGGGCAC
TGGGCGCCGGCCAGGTGCGGGCCTGGGTGGGCCCGCACATCTGCGGTGCCTGCTACGAGGTCCCCGAGGAGCTGCGCGAG
GAGGTCGCGGCCGCCGTCCCGGCGACCCGCGCCACCACGAGCTGGGGCACGCCCGCGCTCGACCTCGGCGCCGGCGTCCG
GGACCAGCTGGACGCGGCCGGATGCTCGGTCGTCGAGGTGGGCGGCTGCACCCGCGAGCTCCCCGCCCTGCACTCCCACC
GCCGCGACGGGGCAGCCGCGGGCCGGCTGGCCGGCGTGGTCTGGAGGGCGGCATGA

Upstream 100 bases:

>100_bases
CGCGGCCCCAGGGCGGCACCACCCCGGACGCGGCGACCCGGCCCGCGCCCCGGCAGGTGCAGTTCGACGACGACGACCTG
GACATCCCCGACTTCCTGAA

Downstream 100 bases:

>100_bases
GCAACGAGCGCCGCGACCAGCTCGCCGCCAACCTCGAGACCGTCCGCGACCGGATCGCCGCGGCCTGCGCCGACGCGGGT
CGCGACCCCGCCGACGTCCG

Product: hypothetical protein

Products: NA

Alternate protein names: ORF3 [H]

Number of amino acids: Translated: 231; Mature: 230

Protein sequence:

>231_residues
MTFLYRDTVSWGPVGTVSVGFTERRLDLGDRAAPAVREAGLAEVAAATGATPYLMHQVHGAEVLLVEDWRSPTWDPQVDA
LLTAEPGRALLTRAADCVPVLLAADTGLIGAVHAGREGVRRGVVTAALERLRALGAGQVRAWVGPHICGACYEVPEELRE
EVAAAVPATRATTSWGTPALDLGAGVRDQLDAAGCSVVEVGGCTRELPALHSHRRDGAAAGRLAGVVWRAA

Sequences:

>Translated_231_residues
MTFLYRDTVSWGPVGTVSVGFTERRLDLGDRAAPAVREAGLAEVAAATGATPYLMHQVHGAEVLLVEDWRSPTWDPQVDA
LLTAEPGRALLTRAADCVPVLLAADTGLIGAVHAGREGVRRGVVTAALERLRALGAGQVRAWVGPHICGACYEVPEELRE
EVAAAVPATRATTSWGTPALDLGAGVRDQLDAAGCSVVEVGGCTRELPALHSHRRDGAAAGRLAGVVWRAA
>Mature_230_residues
TFLYRDTVSWGPVGTVSVGFTERRLDLGDRAAPAVREAGLAEVAAATGATPYLMHQVHGAEVLLVEDWRSPTWDPQVDAL
LTAEPGRALLTRAADCVPVLLAADTGLIGAVHAGREGVRRGVVTAALERLRALGAGQVRAWVGPHICGACYEVPEELREE
VAAAVPATRATTSWGTPALDLGAGVRDQLDAAGCSVVEVGGCTRELPALHSHRRDGAAAGRLAGVVWRAA

Specific function: Unknown

COG id: COG1496

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0124 family [H]

Homologues:

Organism=Escherichia coli, GI1788945, Length=184, Percent_Identity=31.5217391304348, Blast_Score=62, Evalue=4e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003730
- InterPro:   IPR011324 [H]

Pfam domain/function: PF02578 Cu-oxidase_4 [H]

EC number: NA

Molecular weight: Translated: 24109; Mature: 23977

Theoretical pI: Translated: 5.95; Mature: 5.95

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.2 %Cys     (Translated Protein)
0.9 %Met     (Translated Protein)
3.0 %Cys+Met (Translated Protein)
2.2 %Cys     (Mature Protein)
0.4 %Met     (Mature Protein)
2.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTFLYRDTVSWGPVGTVSVGFTERRLDLGDRAAPAVREAGLAEVAAATGATPYLMHQVHG
CCEEEECCCCCCCCCEEEECCCHHHCCCCCCCCHHHHHCCHHHHHHHCCCCHHHHHHHCC
AEVLLVEDWRSPTWDPQVDALLTAEPGRALLTRAADCVPVLLAADTGLIGAVHAGREGVR
CEEEEEECCCCCCCCCCCCEEEECCCCHHHHHHHHHHHEEEEECCCCCEEHHHHCHHHHH
RGVVTAALERLRALGAGQVRAWVGPHICGACYEVPEELREEVAAAVPATRATTSWGTPAL
HHHHHHHHHHHHHHCCCCEEHHHCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCH
DLGAGVRDQLDAAGCSVVEVGGCTRELPALHSHRRDGAAAGRLAGVVWRAA
HHCCCCHHHHHHCCCCEEEECCCCHHHHHHHHHCCCCHHHHHHHHHHEECC
>Mature Secondary Structure 
TFLYRDTVSWGPVGTVSVGFTERRLDLGDRAAPAVREAGLAEVAAATGATPYLMHQVHG
CEEEECCCCCCCCCEEEECCCHHHCCCCCCCCHHHHHCCHHHHHHHCCCCHHHHHHHCC
AEVLLVEDWRSPTWDPQVDALLTAEPGRALLTRAADCVPVLLAADTGLIGAVHAGREGVR
CEEEEEECCCCCCCCCCCCEEEECCCCHHHHHHHHHHHEEEEECCCCCEEHHHHCHHHHH
RGVVTAALERLRALGAGQVRAWVGPHICGACYEVPEELREEVAAAVPATRATTSWGTPAL
HHHHHHHHHHHHHHCCCCEEHHHCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCH
DLGAGVRDQLDAAGCSVVEVGGCTRELPALHSHRRDGAAAGRLAGVVWRAA
HHCCCCHHHHHHCCCCEEEECCCCHHHHHHHHHCCCCHHHHHHHHHHEECC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8088545 [H]