Definition | Nocardioides sp. JS614 chromosome, complete genome. |
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Accession | NC_008699 |
Length | 4,985,871 |
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The map label for this gene is lgt [H]
Identifier: 119717247
GI number: 119717247
Start: 3224299
End: 3225243
Strand: Reverse
Name: lgt [H]
Synonym: Noca_3023
Alternate gene names: 119717247
Gene position: 3225243-3224299 (Counterclockwise)
Preceding gene: 119717248
Following gene: 119717246
Centisome position: 64.69
GC content: 71.53
Gene sequence:
>945_bases GTGACCACCCTGATCGCTCAGGTGAGCGTGCTGTCGATCCCGAGCCCGTCCTCGGGCGTGTGGTACCTCGGCCCGGTGCC GATCCGCGGCTACGCGCTCGCGATCATCGCCGGCATCGTCGCGGCGATCTGGATCGGCGAGCGGCGCTGGATCGCGCGGG GCGGCCGCGCAGGCGACGTCCAGGACCTGGCGCTGTGGGCCGTGCCGTTCGGGCTGGTCGGCGGCCGGATCTACCACGTG CTCACCGACAGCGACCTCTACTTCGGCGACGGTCGGCACCCGATCGAGGCGCTCTATGTCTGGCGCGGCGGTCTCGGCGT CTGGGGCTCGATCGCGCTCGGCGCCCTCGGGGTCTACATCGGCGCCCGCCGCAAGGGCATCCGGATGCTCCCGGTGCTCG ACGCGATGGCGCCCGGCGTCCTGGTGGCGCAGGCTGTGGGGCGCTGGGGCAACTGGTTCAACCAGGAGCTGTTCGGCAAG CCGACCGACCTGCCCTGGGGCCTGGAGATCGACGCCGACCACCGCCCGCTCGGCTATCTCGAGGACCCGACCTTCCACCC GACATTCCTCTACGAGTGCGTGTGGAACCTCGGTGCGTTCGGCTTCGTGATCTGGGCCGACCGCCGGTTCCGGCTGGGCC ACGGCCGGGTGCTGGCGCTCTACGTGATGGCCTACACGCTCGGCCGCGGCTGGATCGAGATGCTGCGCATCGACGACGTC GAGCTGTCCGACGTCGGCGGCCTGCGGTTCAACGTGTGGACCTCGATCGTGCTGTTCGTCGTGGCTGCGGTCTGCTTCGT GGTCAGCGGCCGGCTGCGGCCGGGCCGTGAGGAGCAGGTGTACGACGACGAGCACGTCGACCCGGGAGCTGCCGAGGAAT CCGGCGACCTGCCCGCTGCGGGCGGCGGTGTCCGCTCCCACGACGACGGAGCGCCGCCCGGCTGA
Upstream 100 bases:
>100_bases TCACCGCCGACGACACCTCACCGCTGCTGTGGACGCAGGACACCTCGTCGGCCGACCTGGCCGCCGACCTCCACACACTG CTCGCCGAGGAGGCCGACCG
Downstream 100 bases:
>100_bases CCGGGTGCTAATGTGTCACCTCCGCTAGGGCCAATGTCGTCCCCTGCACCTGGCCGGTTCTCTCGGCCACCACTGCACTG CTCGACCAGACGACGGGAGC
Product: prolipoprotein diacylglyceryl transferase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 314; Mature: 313
Protein sequence:
>314_residues MTTLIAQVSVLSIPSPSSGVWYLGPVPIRGYALAIIAGIVAAIWIGERRWIARGGRAGDVQDLALWAVPFGLVGGRIYHV LTDSDLYFGDGRHPIEALYVWRGGLGVWGSIALGALGVYIGARRKGIRMLPVLDAMAPGVLVAQAVGRWGNWFNQELFGK PTDLPWGLEIDADHRPLGYLEDPTFHPTFLYECVWNLGAFGFVIWADRRFRLGHGRVLALYVMAYTLGRGWIEMLRIDDV ELSDVGGLRFNVWTSIVLFVVAAVCFVVSGRLRPGREEQVYDDEHVDPGAAEESGDLPAAGGGVRSHDDGAPPG
Sequences:
>Translated_314_residues MTTLIAQVSVLSIPSPSSGVWYLGPVPIRGYALAIIAGIVAAIWIGERRWIARGGRAGDVQDLALWAVPFGLVGGRIYHV LTDSDLYFGDGRHPIEALYVWRGGLGVWGSIALGALGVYIGARRKGIRMLPVLDAMAPGVLVAQAVGRWGNWFNQELFGK PTDLPWGLEIDADHRPLGYLEDPTFHPTFLYECVWNLGAFGFVIWADRRFRLGHGRVLALYVMAYTLGRGWIEMLRIDDV ELSDVGGLRFNVWTSIVLFVVAAVCFVVSGRLRPGREEQVYDDEHVDPGAAEESGDLPAAGGGVRSHDDGAPPG >Mature_313_residues TTLIAQVSVLSIPSPSSGVWYLGPVPIRGYALAIIAGIVAAIWIGERRWIARGGRAGDVQDLALWAVPFGLVGGRIYHVL TDSDLYFGDGRHPIEALYVWRGGLGVWGSIALGALGVYIGARRKGIRMLPVLDAMAPGVLVAQAVGRWGNWFNQELFGKP TDLPWGLEIDADHRPLGYLEDPTFHPTFLYECVWNLGAFGFVIWADRRFRLGHGRVLALYVMAYTLGRGWIEMLRIDDVE LSDVGGLRFNVWTSIVLFVVAAVCFVVSGRLRPGREEQVYDDEHVDPGAAEESGDLPAAGGGVRSHDDGAPPG
Specific function: Transfers the N-acyl diglyceride group on what will become the N-terminal cysteine of membrane lipoproteins [H]
COG id: COG0682
COG function: function code M; Prolipoprotein diacylglyceryltransferase
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein [H]
Metaboloic importance: Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the lgt family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001640 [H]
Pfam domain/function: PF01790 LGT [H]
EC number: 2.4.99.- [C]
Molecular weight: Translated: 34206; Mature: 34075
Theoretical pI: Translated: 5.60; Mature: 5.60
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 2.2 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 1.3 %Met (Mature Protein) 1.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTTLIAQVSVLSIPSPSSGVWYLGPVPIRGYALAIIAGIVAAIWIGERRWIARGGRAGDV CCCEEEEEEEEECCCCCCCEEEECCCCCCHHHHHHHHHHHHHHHHCCCHHHHCCCCCCCH QDLALWAVPFGLVGGRIYHVLTDSDLYFGDGRHPIEALYVWRGGLGVWGSIALGALGVYI HHHHHHHHHHHHHCCEEEEEEECCEEEECCCCCCEEEEEEEECCCCHHHHHHHHHHHHHH GARRKGIRMLPVLDAMAPGVLVAQAVGRWGNWFNQELFGKPTDLPWGLEIDADHRPLGYL HCCCCCCEEEHHHHHHCCHHHHHHHHHHHHCHHCHHHCCCCCCCCCCEEECCCCCCCCCC EDPTFHPTFLYECVWNLGAFGFVIWADRRFRLGHGRVLALYVMAYTLGRGWIEMLRIDDV CCCCCCHHHHHHHHHHCCCEEEEEEECCEEECCCCHHHHHHHHHHHHHHHHEEHHEECCC ELSDVGGLRFNVWTSIVLFVVAAVCFVVSGRLRPGREEQVYDDEHVDPGAAEESGDLPAA CCCCCCCEEHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC GGGVRSHDDGAPPG CCCCCCCCCCCCCC >Mature Secondary Structure TTLIAQVSVLSIPSPSSGVWYLGPVPIRGYALAIIAGIVAAIWIGERRWIARGGRAGDV CCEEEEEEEEECCCCCCCEEEECCCCCCHHHHHHHHHHHHHHHHCCCHHHHCCCCCCCH QDLALWAVPFGLVGGRIYHVLTDSDLYFGDGRHPIEALYVWRGGLGVWGSIALGALGVYI HHHHHHHHHHHHHCCEEEEEEECCEEEECCCCCCEEEEEEEECCCCHHHHHHHHHHHHHH GARRKGIRMLPVLDAMAPGVLVAQAVGRWGNWFNQELFGKPTDLPWGLEIDADHRPLGYL HCCCCCCEEEHHHHHHCCHHHHHHHHHHHHCHHCHHHCCCCCCCCCCEEECCCCCCCCCC EDPTFHPTFLYECVWNLGAFGFVIWADRRFRLGHGRVLALYVMAYTLGRGWIEMLRIDDV CCCCCCHHHHHHHHHHCCCEEEEEEECCEEECCCCHHHHHHHHHHHHHHHHEEHHEECCC ELSDVGGLRFNVWTSIVLFVVAAVCFVVSGRLRPGREEQVYDDEHVDPGAAEESGDLPAA CCCCCCCEEHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC GGGVRSHDDGAPPG CCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: NA