Definition | Nocardioides sp. JS614 chromosome, complete genome. |
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Accession | NC_008699 |
Length | 4,985,871 |
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The map label for this gene is pyk [H]
Identifier: 119717244
GI number: 119717244
Start: 3216553
End: 3218016
Strand: Reverse
Name: pyk [H]
Synonym: Noca_3020
Alternate gene names: 119717244
Gene position: 3218016-3216553 (Counterclockwise)
Preceding gene: 119717245
Following gene: 119717242
Centisome position: 64.54
GC content: 70.97
Gene sequence:
>1464_bases GTGCGTAGAGCGAAGATCGTGTGCACCCTGGGCCCCGCGGTGGCGAACCCTCGACGGATCCGTGAACTGGTCTATGCCGG CATGGACGTCGCCCGCCTGAACATGAGCCACGGCTCGCACGAGGACCATGCCGAGGCCTACCGCCTCGTGCGCGAGGCCT CGGACGCGAGCGGCCACGGCGTCGGCATCTTCGCCGACCTGCAGGGCCCGAAGATCCGGCTCGAGCGGTTCGCGAACGGT CCGGTCGTGCTGACCCGCGGGCAGGCGTGGACGATCACCACCCGCGACGTGCCCGGCGACGACCGCGAGTGCGGGACGAC GTACAAGGGCCTGCCCGGCGACGTGAGCGTCGGCGACCCGATCCTCATCGACGACGGCAAGGTGCGGCTGCGGGTCACCA AGGTCGACGGACCGGACGTGCACACCGAGGTGCTCGTGGGCGGCAAGGTCAGCGACAACAAGGGCATCAACCTGCCCGGC GTCGCCGTGTCCGTGCCGGCGCTGTCGGAGAAGGACATCGAGGACCTGCGCTTCGCGCTGCACCTCACGGTCGACTTCAT CGCGCTGAGCTTCGTACGCGACGCCAAGGACGTCGAGGACGTCCGGCGGATCATGGACGAGGAGGGCGTGCACCTCCCGG TCATCGCGAAGATCGAGAAGCCGCAGGCGATCGAGAACCTCGACGAGGTGATCGCGGCGTTCGACGGCTTCATGGTCGCC CGCGGCGACCTCGGCGTGGAGTGCCCGCTCGAGGACGTCCCGTTCCTGCAGAAGCGGATCGTCGAGAAGGCCCGCCTCAA CGCCAAGCCCGTCATCGTCGCGACCCAGATGCTGGAGTCGATGATCGGCAACCCCGCGCCGACCCGCGCCGAGGCCTCCG ACGTCGCGAACGCCGTCCTCGACGGCGCCGACGCGGTGATGCTGTCCGGCGAGACCAGCGTGGGGGAGTACCCCGTCCAC ACCGTCGAGACGATGGCGCGGATCATCGCGGCGACCGAGGCGCACGCCCTGGCGCAGCCCCCGGGCCGGGCCGCCCTCGC CGAGATCGACTGGGACCCGCACACCCGCGGCGGCGTGATCGCCAAGGCCGCCGAGGAGGTCGCCGAGCGGGTCGGGGCGA AGTACGTCGTCGCCTTCACCCAGAGCGGTGACTCCGCGCGCCGGATGTCGCGGCTGCGTGGCCCGATCCCGATCCTCGCG TTCACGCCGGTCGGGGTGGTGCGCTCGCAGCTCGCGCTGACCTGGGGGATCGAGACGTTCCTGACCCAGCCCGTCGAGCA CACCGACGAGATGGTCCGTCAGGTCGACGACCAGCTGCTCCGGATCGGCCGGGTCCGCGAGGGTGACCTCGTGGTCATCA TCGCGGGCGCCCCTCCGGGCATCCCCGGGTCGACGAACGCGCTGCGGATCCACCGGATGGGCGACGCGATCAACCAGGTC GCGCCGGCGTACCGCCGCAGCTGA
Upstream 100 bases:
>100_bases GCCCGCCGCGGTCGGGACCAACGGCACCTTCCGGTCCCGGCCGCGGAGTTACCGGAGGGTTTGGTCTTTGAACGATCAAA GTCGCGGTAGGGTGAAGCAC
Downstream 100 bases:
>100_bases ACATCAGCGCTTCAGCCCGATCAGCGTGTCGAGCCTGGCCACTGCGGCGCGGGTCGAGACGCTGATCGTCTTCGCGTTCG ACTGCCGCCACGGGACGTCG
Product: pyruvate kinase
Products: NA
Alternate protein names: PK [H]
Number of amino acids: Translated: 487; Mature: 487
Protein sequence:
>487_residues MRRAKIVCTLGPAVANPRRIRELVYAGMDVARLNMSHGSHEDHAEAYRLVREASDASGHGVGIFADLQGPKIRLERFANG PVVLTRGQAWTITTRDVPGDDRECGTTYKGLPGDVSVGDPILIDDGKVRLRVTKVDGPDVHTEVLVGGKVSDNKGINLPG VAVSVPALSEKDIEDLRFALHLTVDFIALSFVRDAKDVEDVRRIMDEEGVHLPVIAKIEKPQAIENLDEVIAAFDGFMVA RGDLGVECPLEDVPFLQKRIVEKARLNAKPVIVATQMLESMIGNPAPTRAEASDVANAVLDGADAVMLSGETSVGEYPVH TVETMARIIAATEAHALAQPPGRAALAEIDWDPHTRGGVIAKAAEEVAERVGAKYVVAFTQSGDSARRMSRLRGPIPILA FTPVGVVRSQLALTWGIETFLTQPVEHTDEMVRQVDDQLLRIGRVREGDLVVIIAGAPPGIPGSTNALRIHRMGDAINQV APAYRRS
Sequences:
>Translated_487_residues MRRAKIVCTLGPAVANPRRIRELVYAGMDVARLNMSHGSHEDHAEAYRLVREASDASGHGVGIFADLQGPKIRLERFANG PVVLTRGQAWTITTRDVPGDDRECGTTYKGLPGDVSVGDPILIDDGKVRLRVTKVDGPDVHTEVLVGGKVSDNKGINLPG VAVSVPALSEKDIEDLRFALHLTVDFIALSFVRDAKDVEDVRRIMDEEGVHLPVIAKIEKPQAIENLDEVIAAFDGFMVA RGDLGVECPLEDVPFLQKRIVEKARLNAKPVIVATQMLESMIGNPAPTRAEASDVANAVLDGADAVMLSGETSVGEYPVH TVETMARIIAATEAHALAQPPGRAALAEIDWDPHTRGGVIAKAAEEVAERVGAKYVVAFTQSGDSARRMSRLRGPIPILA FTPVGVVRSQLALTWGIETFLTQPVEHTDEMVRQVDDQLLRIGRVREGDLVVIIAGAPPGIPGSTNALRIHRMGDAINQV APAYRRS >Mature_487_residues MRRAKIVCTLGPAVANPRRIRELVYAGMDVARLNMSHGSHEDHAEAYRLVREASDASGHGVGIFADLQGPKIRLERFANG PVVLTRGQAWTITTRDVPGDDRECGTTYKGLPGDVSVGDPILIDDGKVRLRVTKVDGPDVHTEVLVGGKVSDNKGINLPG VAVSVPALSEKDIEDLRFALHLTVDFIALSFVRDAKDVEDVRRIMDEEGVHLPVIAKIEKPQAIENLDEVIAAFDGFMVA RGDLGVECPLEDVPFLQKRIVEKARLNAKPVIVATQMLESMIGNPAPTRAEASDVANAVLDGADAVMLSGETSVGEYPVH TVETMARIIAATEAHALAQPPGRAALAEIDWDPHTRGGVIAKAAEEVAERVGAKYVVAFTQSGDSARRMSRLRGPIPILA FTPVGVVRSQLALTWGIETFLTQPVEHTDEMVRQVDDQLLRIGRVREGDLVVIIAGAPPGIPGSTNALRIHRMGDAINQV APAYRRS
Specific function: Glycolysis; final step. [C]
COG id: COG0469
COG function: function code G; Pyruvate kinase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the pyruvate kinase family [H]
Homologues:
Organism=Homo sapiens, GI33286418, Length=491, Percent_Identity=39.1038696537678, Blast_Score=305, Evalue=8e-83, Organism=Homo sapiens, GI33286422, Length=489, Percent_Identity=38.4458077709611, Blast_Score=303, Evalue=3e-82, Organism=Homo sapiens, GI33286420, Length=489, Percent_Identity=38.4458077709611, Blast_Score=303, Evalue=3e-82, Organism=Homo sapiens, GI10835121, Length=495, Percent_Identity=40.6060606060606, Blast_Score=292, Evalue=4e-79, Organism=Homo sapiens, GI32967597, Length=495, Percent_Identity=40.6060606060606, Blast_Score=292, Evalue=6e-79, Organism=Homo sapiens, GI310128732, Length=287, Percent_Identity=39.3728222996516, Blast_Score=202, Evalue=6e-52, Organism=Homo sapiens, GI310128730, Length=287, Percent_Identity=39.3728222996516, Blast_Score=202, Evalue=6e-52, Organism=Homo sapiens, GI310128736, Length=235, Percent_Identity=37.4468085106383, Blast_Score=159, Evalue=5e-39, Organism=Homo sapiens, GI310128734, Length=235, Percent_Identity=37.4468085106383, Blast_Score=159, Evalue=5e-39, Organism=Homo sapiens, GI310128738, Length=214, Percent_Identity=37.3831775700935, Blast_Score=140, Evalue=2e-33, Organism=Escherichia coli, GI1787965, Length=479, Percent_Identity=40.7098121085595, Blast_Score=343, Evalue=2e-95, Organism=Escherichia coli, GI1788160, Length=480, Percent_Identity=40.4166666666667, Blast_Score=306, Evalue=2e-84, Organism=Caenorhabditis elegans, GI17544584, Length=481, Percent_Identity=39.2931392931393, Blast_Score=308, Evalue=4e-84, Organism=Caenorhabditis elegans, GI17506829, Length=486, Percent_Identity=40.5349794238683, Blast_Score=286, Evalue=1e-77, Organism=Caenorhabditis elegans, GI71984413, Length=486, Percent_Identity=40.5349794238683, Blast_Score=286, Evalue=1e-77, Organism=Caenorhabditis elegans, GI71984406, Length=485, Percent_Identity=40.4123711340206, Blast_Score=286, Evalue=2e-77, Organism=Caenorhabditis elegans, GI17506831, Length=488, Percent_Identity=40.5737704918033, Blast_Score=286, Evalue=2e-77, Organism=Saccharomyces cerevisiae, GI6319279, Length=482, Percent_Identity=36.9294605809129, Blast_Score=279, Evalue=6e-76, Organism=Saccharomyces cerevisiae, GI6324923, Length=490, Percent_Identity=35.5102040816327, Blast_Score=256, Evalue=4e-69, Organism=Drosophila melanogaster, GI28571814, Length=496, Percent_Identity=38.9112903225806, Blast_Score=288, Evalue=5e-78, Organism=Drosophila melanogaster, GI24648964, Length=496, Percent_Identity=38.9112903225806, Blast_Score=288, Evalue=6e-78, Organism=Drosophila melanogaster, GI24648966, Length=411, Percent_Identity=39.6593673965937, Blast_Score=272, Evalue=5e-73, Organism=Drosophila melanogaster, GI24581235, Length=489, Percent_Identity=32.3108384458078, Blast_Score=239, Evalue=3e-63, Organism=Drosophila melanogaster, GI24646914, Length=276, Percent_Identity=39.8550724637681, Blast_Score=183, Evalue=2e-46,
Paralogues:
None
Copy number: 500 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). 124 Molecules/Cell In: Growth Phase, Glucose-minimal MOPS Media. [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001697 - InterPro: IPR015813 - InterPro: IPR011037 - InterPro: IPR015794 - InterPro: IPR018209 - InterPro: IPR015793 - InterPro: IPR015795 - InterPro: IPR015806 [H]
Pfam domain/function: PF00224 PK; PF02887 PK_C [H]
EC number: =2.7.1.40 [H]
Molecular weight: Translated: 52492; Mature: 52492
Theoretical pI: Translated: 5.65; Mature: 5.65
Prosite motif: PS00110 PYRUVATE_KINASE
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 3.1 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 2.5 %Met (Mature Protein) 3.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRRAKIVCTLGPAVANPRRIRELVYAGMDVARLNMSHGSHEDHAEAYRLVREASDASGHG CCCEEEEEEECCCCCCHHHHHHHHHCCCCEEEEECCCCCCHHHHHHHHHHHHHCCCCCCC VGIFADLQGPKIRLERFANGPVVLTRGQAWTITTRDVPGDDRECGTTYKGLPGDVSVGDP EEEEEECCCCEEEHEECCCCCEEEECCCEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCE ILIDDGKVRLRVTKVDGPDVHTEVLVGGKVSDNKGINLPGVAVSVPALSEKDIEDLRFAL EEEECCEEEEEEEECCCCCCCEEEEECCEECCCCCCCCCCCEEECCCCCCCCHHHHHHHH HLTVDFIALSFVRDAKDVEDVRRIMDEEGVHLPVIAKIEKPQAIENLDEVIAAFDGFMVA HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEEECCCHHHHHHHHHHHHHCCEEEE RGDLGVECPLEDVPFLQKRIVEKARLNAKPVIVATQMLESMIGNPAPTRAEASDVANAVL ECCCCCCCCCCCCCHHHHHHHHHHHCCCCCCHHHHHHHHHHHCCCCCCCCHHHHHHHHHH DGADAVMLSGETSVGEYPVHTVETMARIIAATEAHALAQPPGRAALAEIDWDPHTRGGVI CCCCEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCEEEECCCCCCCCCCCH AKAAEEVAERVGAKYVVAFTQSGDSARRMSRLRGPIPILAFTPVGVVRSQLALTWGIETF HHHHHHHHHHCCCEEEEEEECCCCHHHHHHHHCCCCCEEEECCHHHHHHHHHHHHCHHHH LTQPVEHTDEMVRQVDDQLLRIGRVREGDLVVIIAGAPPGIPGSTNALRIHRMGDAINQV HCCCHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEECCCCCCCCCCCEEEEEEHHHHHHHH APAYRRS CHHHHCC >Mature Secondary Structure MRRAKIVCTLGPAVANPRRIRELVYAGMDVARLNMSHGSHEDHAEAYRLVREASDASGHG CCCEEEEEEECCCCCCHHHHHHHHHCCCCEEEEECCCCCCHHHHHHHHHHHHHCCCCCCC VGIFADLQGPKIRLERFANGPVVLTRGQAWTITTRDVPGDDRECGTTYKGLPGDVSVGDP EEEEEECCCCEEEHEECCCCCEEEECCCEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCE ILIDDGKVRLRVTKVDGPDVHTEVLVGGKVSDNKGINLPGVAVSVPALSEKDIEDLRFAL EEEECCEEEEEEEECCCCCCCEEEEECCEECCCCCCCCCCCEEECCCCCCCCHHHHHHHH HLTVDFIALSFVRDAKDVEDVRRIMDEEGVHLPVIAKIEKPQAIENLDEVIAAFDGFMVA HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEEECCCHHHHHHHHHHHHHCCEEEE RGDLGVECPLEDVPFLQKRIVEKARLNAKPVIVATQMLESMIGNPAPTRAEASDVANAVL ECCCCCCCCCCCCCHHHHHHHHHHHCCCCCCHHHHHHHHHHHCCCCCCCCHHHHHHHHHH DGADAVMLSGETSVGEYPVHTVETMARIIAATEAHALAQPPGRAALAEIDWDPHTRGGVI CCCCEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCEEEECCCCCCCCCCCH AKAAEEVAERVGAKYVVAFTQSGDSARRMSRLRGPIPILAFTPVGVVRSQLALTWGIETF HHHHHHHHHHCCCEEEEEEECCCCHHHHHHHHCCCCCEEEECCHHHHHHHHHHHHCHHHH LTQPVEHTDEMVRQVDDQLLRIGRVREGDLVVIIAGAPPGIPGSTNALRIHRMGDAINQV HCCCHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEECCCCCCCCCCCEEEEEEHHHHHHHH APAYRRS CHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA